No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs550149865 |
chr9:100613158-100613159 |
Weak transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
2 |
rs117647586 |
chr9:100613191-100613192 |
Weak transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs3758252 |
chr9:100613235-100613236 |
Weak transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs552386114 |
chr9:100613321-100613322 |
Weak transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
5 |
rs571038265 |
chr9:100613331-100613332 |
Weak transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs7032302 |
chr9:100613368-100613369 |
Weak transcription
|
TF binding region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
7 |
rs547076720 |
chr9:100613382-100613383 |
Weak transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs568422719 |
chr9:100613521-100613522 |
Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Weak transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs558435069 |
chr9:100613633-100613634 |
Bivalent/Poised TSS Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs115240813 |
chr9:100613655-100613656 |
Bivalent/Poised TSS Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh
|
TF binding regionCpG island
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs557390119 |
chr9:100613679-100613680 |
Bivalent/Poised TSS Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh
|
TF binding regionCpG island
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs72753506 |
chr9:100613689-100613690 |
Bivalent/Poised TSS Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh
|
TF binding regionCpG island
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
13 |
rs539729813 |
chr9:100613695-100613696 |
Bivalent/Poised TSS Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh
|
TF binding regionCpG island
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs3758251 |
chr9:100613700-100613701 |
Bivalent/Poised TSS Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh
|
TF binding region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
15 |
rs572997390 |
chr9:100613713-100613714 |
Bivalent/Poised TSS Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs144442167 |
chr9:100613723-100613724 |
Bivalent/Poised TSS Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs555478760 |
chr9:100613737-100613738 |
Bivalent/Poised TSS Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs573650584 |
chr9:100613772-100613773 |
Bivalent/Poised TSS Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs116694708 |
chr9:100613781-100613782 |
Bivalent/Poised TSS Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs114389587 |
chr9:100613783-100613784 |
Bivalent/Poised TSS Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
21 |
rs192308206 |
chr9:100613803-100613804 |
Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Weak transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
22 |
rs78164573 |
chr9:100613813-100613814 |
Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Weak transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs72753507 |
chr9:100613836-100613837 |
Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Weak transcription
|
TF binding region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
24 |
rs564579305 |
chr9:100613858-100613859 |
Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Weak transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs370600040 |
chr9:100613862-100613863 |
Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Weak transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
26 |
rs72753508 |
chr9:100613885-100613886 |
Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Weak transcription
|
TF binding region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
27 |
rs184739970 |
chr9:100613934-100613935 |
Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Weak transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
28 |
rs568588867 |
chr9:100613947-100613948 |
Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Weak transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
29 |
rs10046805 |
chr9:100613956-100613957 |
Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Weak transcription
|
TF binding region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
30 |
rs542200 |
chr9:100613962-100613963 |
Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Weak transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
31 |
rs551029891 |
chr9:100613964-100613965 |
Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Weak transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
32 |
rs542197 |
chr9:100613965-100613966 |
Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Weak transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
33 |
rs569290793 |
chr9:100613973-100613974 |
Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Weak transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
34 |
rs3758250 |
chr9:100614001-100614002 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers
|
TF binding region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
35 |
rs558040971 |
chr9:100614022-100614023 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
36 |
rs566645124 |
chr9:100614077-100614078 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
37 |
rs534039490 |
chr9:100614092-100614093 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
38 |
rs189160829 |
chr9:100614135-100614136 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
39 |
rs3758249 |
chr9:100614140-100614141 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers
|
TF binding region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
40 |
rs55917248 |
chr9:100614153-100614154 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers
|
TF binding region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
41 |
rs10983975 |
chr9:100614188-100614189 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers
|
TF binding region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
42 |
rs35778541 |
chr9:100614219-100614220 |
Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Weak transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
43 |
rs76376939 |
chr9:100614220-100614221 |
Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Weak transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
44 |
rs66806500 |
chr9:100614221-100614222 |
Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Weak transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
45 |
rs184690826 |
chr9:100614229-100614230 |
Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Weak transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
46 |
rs4743137 |
chr9:100614232-100614233 |
Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Weak transcription
|
TF binding region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
47 |
rs4743138 |
chr9:100614296-100614297 |
Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Weak transcription
|
TF binding region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
48 |
rs111846096 |
chr9:100614331-100614332 |
Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Weak transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
49 |
rs141622703 |
chr9:100614337-100614338 |
Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Weak transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
50 |
rs189715084 |
chr9:100614383-100614384 |
Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Weak transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|