Variant report

Variant	nsv827384
Chromosome Location	chr15:72765222-72768609
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1195)
CpG islands
(count:733)
Chromatin interactive
region (count:50)
LncRNA
region (count:4)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1195 , 50 per page) page: 1 2 3 4 5 6 7 ... 24

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr15:72765861-72766266	K562	blood:	n/a	n/a
2	ARID3A	chr15:72767457-72767657	HepG2	liver:	n/a	n/a
3	ARID3A	chr15:72765473-72766792	HepG2	liver:	n/a	n/a
4	ATF1	chr15:72765415-72766833	K562	blood:	n/a	chr15:72766643-72766657
5	ATF2	chr15:72765765-72766771	GM12878	blood:	n/a	chr15:72766643-72766657
6	ATF2	chr15:72765717-72766773	H1-hESC	embryonic stem cell:	n/a	chr15:72766643-72766657
7	ATF2	chr15:72765757-72766895	GM12878	blood:	n/a	chr15:72766643-72766657
8	ATF2	chr15:72765825-72766819	H1-hESC	embryonic stem cell:	n/a	chr15:72766643-72766657
9	ATF3	chr15:72765720-72766864	A549	lung:	n/a	chr15:72766594-72766614 chr15:72766105-72766112 chr15:72766104-72766112 chr15:72766105-72766113 chr15:72766646-72766660 chr15:72766620-72766640 chr15:72766101-72766116
10	ATF3	chr15:72765844-72766327	K562	blood:	n/a	chr15:72766105-72766112 chr15:72766104-72766112 chr15:72766105-72766113 chr15:72766101-72766116
11	ATF3	chr15:72765937-72766280	K562	blood:	n/a	chr15:72766105-72766112 chr15:72766104-72766112 chr15:72766105-72766113 chr15:72766101-72766116
12	ATF3	chr15:72765891-72766911	A549	lung:	n/a	chr15:72766594-72766614 chr15:72766105-72766112 chr15:72766104-72766112 chr15:72766105-72766113 chr15:72766646-72766660 chr15:72766620-72766640 chr15:72766101-72766116
13	ATF3	chr15:72766454-72766768	K562	blood:	n/a	chr15:72766594-72766614 chr15:72766646-72766660 chr15:72766620-72766640
14	BACH1	chr15:72765944-72766716	H1-hESC	embryonic stem cell:	n/a	n/a
15	BATF	chr15:72766009-72766177	GM12878	blood:	n/a	chr15:72766102-72766115
16	BCL3	chr15:72765450-72767786	A549	lung:	n/a	chr15:72767688-72767697 chr15:72766587-72766600 chr15:72767366-72767375
17	BCL3	chr15:72765776-72766785	A549	lung:	n/a	chr15:72766587-72766600
18	BCL3	chr15:72766392-72766782	GM12878	blood:	n/a	chr15:72766587-72766600
19	BCL3	chr15:72767299-72768002	A549	lung:	n/a	chr15:72767688-72767697 chr15:72767366-72767375
20	BCLAF1	chr15:72765888-72766834	GM12878	blood:	n/a	chr15:72766587-72766600
21	BCLAF1	chr15:72767244-72767821	GM12878	blood:	n/a	chr15:72767688-72767697 chr15:72767366-72767375
22	BCLAF1	chr15:72767234-72767699	GM12878	blood:	n/a	chr15:72767688-72767697 chr15:72767366-72767375
23	BCLAF1	chr15:72765843-72766924	GM12878	blood:	n/a	chr15:72766587-72766600
24	BHLHE40	chr15:72767284-72767629	K562	blood:	n/a	chr15:72767364-72767380
25	BHLHE40	chr15:72767305-72767937	GM12878	blood:	n/a	chr15:72767364-72767380
26	BHLHE40	chr15:72765990-72766907	K562	blood:	n/a	chr15:72766718-72766734
27	BHLHE40	chr15:72765602-72766850	GM12878	blood:	n/a	chr15:72766718-72766734
28	BHLHE40	chr15:72765990-72766815	HepG2	liver:	n/a	chr15:72766718-72766734
29	BRCA1	chr15:72766046-72766852	GM12878	blood:	n/a	chr15:72766241-72766248
30	BRCA1	chr15:72765743-72766810	Hela-S3	cervix:	n/a	chr15:72766241-72766248
31	BRCA1	chr15:72766023-72767132	HepG2	liver:	n/a	chr15:72766241-72766248
32	BRCA1	chr15:72767460-72768018	Hela-S3	cervix:	n/a	n/a
33	BRCA1	chr15:72766061-72766692	H1-hESC	embryonic stem cell:	n/a	chr15:72766241-72766248
34	CBX3	chr15:72765782-72766378	K562	blood:	n/a	n/a
35	CBX3	chr15:72767253-72767695	K562	blood:	n/a	n/a
36	CBX3	chr15:72766387-72766881	K562	blood:	n/a	n/a
37	CCNT2	chr15:72766089-72767776	K562	blood:	n/a	n/a
38	CEBPB	chr15:72766034-72766755	H1-hESC	embryonic stem cell:	n/a	n/a
39	CEBPB	chr15:72765793-72766912	A549	lung:	n/a	n/a
40	CEBPB	chr15:72767299-72768184	Hela-S3	cervix:	n/a	n/a
41	CEBPB	chr15:72765929-72766798	IMR90	lung:	n/a	n/a
42	CEBPB	chr15:72765948-72766776	K562	blood:	n/a	n/a
43	CEBPB	chr15:72766486-72766707	HepG2	liver:	n/a	n/a
44	CEBPB	chr15:72766401-72766769	K562	blood:	n/a	n/a
45	CEBPB	chr15:72768561-72768897	K562	blood:	n/a	chr15:72768761-72768772
46	CEBPB	chr15:72767362-72767676	IMR90	lung:	n/a	n/a
47	CEBPB	chr15:72765902-72766849	Hela-S3	cervix:	n/a	n/a
48	CEBPB	chr15:72765996-72766800	HepG2	liver:	n/a	n/a
49	CEBPB	chr15:72766045-72766926	ECC-1	luminal epithelium:	n/a	n/a
50	CEBPB	chr15:72765949-72766791	A549	lung:	n/a	n/a

(count:733 , 50 per page) page: 1 2 3 4 5 6 7 ... 15

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr15:72767139-72767189	HCM	heart:	n/a
2	chr15:72767139-72767189	HCM	heart:	n/a
3	chr15:72766486-72766536	HepG2	liver:	n/a
4	chr15:72766497-72766547	NHDF-neo	bronchial:	n/a
5	chr15:72766291-72766341	BJ	skin:	n/a
6	chr15:72767565-72767615	HMEC	breast:	n/a
7	chr15:72767139-72767189	SAEC	small airway:	n/a
8	chr15:72767565-72767615	HEEpiC	esophagus:	n/a
9	chr15:72766291-72766341	HEEpiC	esophagus:	n/a
10	chr15:72767332-72767382	HAEpiC	amniotic membrane:	n/a
11	chr15:72766139-72766189	LNCaP	prostate:	n/a
12	chr15:72766291-72766341	AoSMC	blood vessel:	n/a
13	chr15:72767139-72767189	T-47D	breast:	n/a
14	chr15:72766740-72766790	HIPEpiC	eye:	n/a
15	chr15:72766637-72766687	HEEpiC	esophagus:	n/a
16	chr15:72766139-72766189	K562	blood:	n/a
17	chr15:72767332-72767382	HNPCEpiC	eye:	n/a
18	chr15:72767332-72767382	MCF10A-Er-Src	breast:	n/a
19	chr15:72766486-72766536	U87	brain:	n/a
20	chr15:72766740-72766790	Jurkat	blood:	n/a
21	chr15:72766609-72766659	Hela-S3	cervix:	n/a
22	chr15:72766486-72766536	HEK293	kidney:	embryo
23	chr15:72766497-72766547	HPAEpiC	pulmonary alveolar:	n/a
24	chr15:72766486-72766536	NHBE	bronchial:	n/a
25	chr15:72766291-72766341	GM12891	blood:	n/a
26	chr15:72766732-72766782	HCF	heart:	n/a
27	chr15:72766291-72766341	ovcar-3	ovarian:	n/a
28	chr15:72766609-72766659	AG09319	gingival:	n/a
29	chr15:72766470-72766520	BE2_C	brain:	n/a
30	chr15:72766609-72766659	MCF10A-Er-Src	breast:	n/a
31	chr15:72766486-72766536	HRPEpiC	eye:	n/a
32	chr15:72766740-72766790	AG04449	skin:	fetal
33	chr15:72766470-72766520	HPAEpiC	pulmonary alveolar:	n/a
34	chr15:72766732-72766782	HPAEpiC	pulmonary alveolar:	n/a
35	chr15:72766609-72766659	SK-N-MC	brain:	n/a
36	chr15:72766609-72766659	HEEpiC	esophagus:	n/a
37	chr15:72766291-72766341	ECC-1	luminal epithelium:	n/a
38	chr15:72766637-72766687	SK-N-MC	brain:	n/a
39	chr15:72766740-72766790	HCF	heart:	n/a
40	chr15:72766291-72766341	SAEC	small airway:	n/a
41	chr15:72766497-72766547	NB4	blood:	n/a
42	chr15:72766637-72766687	CMK	blood:	n/a
43	chr15:72766470-72766520	PrEC	prostate:	n/a
44	chr15:72766486-72766536	MCF-7	breast:	n/a
45	chr15:72767139-72767189	MCF-7	breast:	n/a
46	chr15:72766470-72766520	Caco-2	colon:	n/a
47	chr15:72766497-72766547	GM06990	blood:	n/a
48	chr15:72766291-72766341	H1-hESC	embryonic stem cell:	embryo
49	chr15:72766609-72766659	AG10803	skin:	n/a
50	chr15:72766732-72766782	NHBE	bronchial:	n/a

(count:50 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr15:72692001..72694745-chr15:72764264..72766502,3	MCF-7	breast:
2	chr15:72667344..72672450-chr15:72764755..72768100,8	K562	blood:
3	chr15:72667845..72668386-chr15:72766555..72767490,2	MCF-7	breast:
4	chr15:31283761..31284351-chr15:72766188..72766795,2	Hela-S3	cervix:
5	chr15:72765649..72767573-chr15:72851905..72854681,2	MCF-7	breast:
6	chr15:72523282..72524844-chr15:72764635..72767200,2	MCF-7	breast:
7	chr15:72766492..72767388-chr2:192542439..192543245,2	NB4	blood:
8	chr15:72766092..72766632-chr6:111136617..111137192,2	Hela-S3	cervix:
9	chr10:97889581..97890385-chr15:72766087..72766662,2	NB4	blood:
10	chr15:72766264..72766975-chr6:75952786..75953522,2	Hela-S3	cervix:
11	chr15:72666558..72670735-chr15:72765041..72769475,12	MCF-7	breast:
12	chr15:72563307..72566923-chr15:72766066..72767771,5	K562	blood:
13	chr15:72765898..72766528-chr22:39096921..39097517,2	Hela-S3	cervix:
14	chr15:72765683..72767705-chr9:134393823..134395690,2	MCF-7	breast:
15	chr15:72521977..72524663-chr15:72766747..72769820,3	MCF-7	breast:
16	chr15:72666408..72669827-chr15:72764535..72767754,3	MCF-7	breast:
17	chr15:72742962..72745809-chr15:72764358..72766379,2	MCF-7	breast:
18	chr13:60970459..60971145-chr15:72766308..72766853,2	Hela-S3	cervix:
19	chr12:58334615..58335529-chr15:72766822..72767478,2	NB4	blood:
20	chr1:145382332..145383125-chr15:72765176..72765676,2	NB4	blood:
21	chr15:72766134..72766991-chr4:170541028..170542024,2	Hela-S3	cervix:
22	chr15:72597786..72600011-chr15:72766508..72768760,2	K562	blood:
23	chr15:72764026..72766932-chr15:72877151..72879938,2	K562	blood:
24	chr12:39836717..39837250-chr15:72766168..72767135,2	Hela-S3	cervix:
25	chr15:72476533..72478146-chr15:72764010..72766539,2	MCF-7	breast:
26	chr15:72766426..72767386-chr19:55580332..55581086,2	Hela-S3	cervix:
27	chr15:72766345..72767161-chr16:2029216..2029791,2	Hela-S3	cervix:
28	chr15:72765370..72766302-chr5:43313191..43314042,2	Hela-S3	cervix:
29	chr15:72635873..72639008-chr15:72766396..72768888,3	MCF-7	breast:
30	chr15:72766606..72767120-chr20:34680361..34680953,2	Hela-S3	cervix:
31	chr10:112678753..112679731-chr15:72766280..72767015,2	Hela-S3	cervix:
32	chr15:72766031..72766916-chr19:39881711..39882606,3	Hela-S3	cervix:
33	chr15:72764850..72767674-chr15:72977020..72979928,5	K562	blood:
34	chr15:72649215..72653843-chr15:72765321..72768285,4	MCF-7	breast:
35	chr15:72765939..72768920-chr17:57914780..57917464,3	MCF-7	breast:
36	chr15:72558362..72561235-chr15:72766233..72767996,2	MCF-7	breast:
37	chr15:72766307..72767210-chr5:40834451..40835447,2	Hela-S3	cervix:
38	chr15:72651340..72653865-chr15:72768318..72770025,2	MCF-7	breast:
39	chr15:72765203..72766825-chr15:73342381..73345092,2	MCF-7	breast:
40	chr15:72520897..72524301-chr15:72765072..72768298,5	K562	blood:
41	chr15:72458549..72461101-chr15:72765178..72767894,2	K562	blood:
42	chr15:72765821..72767148-chr3:160282369..160283817,3	Hela-S3	cervix:
43	chr15:72497804..72499839-chr15:72765083..72768033,2	K562	blood:
44	chr15:72750881..72760234-chr15:72764528..72769120,23	MCF-7	breast:
45	chr15:72766257..72767092-chr8:101733763..101734643,2	HCT-116	colon:
46	chr15:72563307..72566923-chr15:72766066..72767771,3	K562	blood:
47	chr15:72765119..72766854-chr2:171784790..171787087,2	K562	blood:
48	chr15:72766094..72767084-chr8:95731493..95732399,2	Hela-S3	cervix:
49	chr15:72519181..72521639-chr15:72766210..72768068,3	MCF-7	breast:
50	chr15:72609440..72614186-chr15:72765313..72769259,6	MCF-7	breast:

(count:4 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-HEXA-3	chr15:72761633-72766666	NONHSAT047096
2	lnc-HEXA-3	chr15:72766216-72766399	XLOC_011523
3	lnc-HEXA-3	chr15:72766216-72766550	ENSG00000261423.1
4	lnc-HEXA-3	chr15:72766216-72766615	XLOC_011523

No data

Variant related genes	Relation type
ENSG00000261423	TF binding region
ARIH1	TF binding region
ENSG00000261423	CpG island
ARIH1	CpG island
ENSG00000109572	chromatin interactions
ENSG00000130714	chromatin interactions
ENSG00000271072	chromatin interactions
ENSG00000166912	chromatin interactions
ENSG00000233396	chromatin interactions
ENSG00000260339	chromatin interactions
ENSG00000214413	chromatin interactions
ENSG00000229320	chromatin interactions
ENSG00000160439	chromatin interactions
ENSG00000137817	chromatin interactions
ENSG00000006712	chromatin interactions
ENSG00000139116	chromatin interactions
ENSG00000175202	chromatin interactions
ENSG00000166233	chromatin interactions
ENSG00000140463	chromatin interactions
ENSG00000063322	chromatin interactions
ENSG00000166896	chromatin interactions
ENSG00000201558	chromatin interactions
ENSG00000112972	chromatin interactions
ENSG00000100221	chromatin interactions
ENSG00000067225	chromatin interactions
ENSG00000115806	chromatin interactions
ENSG00000083544	chromatin interactions
ENSG00000112695	chromatin interactions
ENSG00000175318	chromatin interactions
ENSG00000067141	chromatin interactions
ENSG00000186432	chromatin interactions
ENSG00000062716	chromatin interactions
ENSG00000145592	chromatin interactions
ENSG00000252974	chromatin interactions
ENSG00000108061	chromatin interactions
ENSG00000243007	chromatin interactions
ENSG00000260729	chromatin interactions
ENSG00000156162	chromatin interactions
ENSG00000196408	chromatin interactions
ENSG00000173559	chromatin interactions
ENSG00000261187	chromatin interactions
ENSG00000140488	chromatin interactions
ENSG00000177853	chromatin interactions
ENSG00000273025	chromatin interactions
ENSG00000070756	chromatin interactions
ENSG00000088367	chromatin interactions
ENSG00000155111	chromatin interactions
ENSG00000207690	chromatin interactions
ENSG00000213614	chromatin interactions
IL8	miRNA target sites

Extended variants
information (count: 132 )
Associated
traits (count: 76 )

Variant overlapped rSNPs/rCNVs (count:132 , 50 per page) page: 1 2 3

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs369994301	chr15:72765246-72765247	Weak transcription Active TSS Enhancers Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	16 gene(s)	Overlapped CNVs	n/a
2	rs191097970	chr15:72765250-72765251	Weak transcription Active TSS Enhancers Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	16 gene(s)	Overlapped CNVs	n/a
3	rs182122779	chr15:72765285-72765286	Weak transcription Active TSS Enhancers Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	16 gene(s)	Overlapped CNVs	n/a
4	rs537867785	chr15:72765318-72765319	Weak transcription Active TSS Enhancers Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	18 gene(s)	Overlapped CNVs	n/a
5	rs186716938	chr15:72765339-72765340	Weak transcription Active TSS Enhancers Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	18 gene(s)	Overlapped CNVs	n/a
6	rs577676971	chr15:72765371-72765372	Weak transcription Active TSS Enhancers Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	19 gene(s)	Overlapped CNVs	n/a
7	rs192501282	chr15:72765383-72765384	Weak transcription Active TSS Enhancers Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	19 gene(s)	Overlapped CNVs	n/a
8	rs79271362	chr15:72765387-72765388	Weak transcription Active TSS Enhancers Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	19 gene(s)	Overlapped CNVs	n/a
9	rs572244963	chr15:72765411-72765412	Active TSS Enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region lncRNA	19 gene(s)	Overlapped CNVs	n/a
10	rs370616146	chr15:72765439-72765440	Active TSS Enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region lncRNA	19 gene(s)	Overlapped CNVs	n/a
11	rs113683051	chr15:72765483-72765484	Active TSS Enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region lncRNA	19 gene(s)	Overlapped CNVs	n/a
12	rs183084272	chr15:72765504-72765505	Active TSS Enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region lncRNA	19 gene(s)	Overlapped CNVs	n/a
13	rs34767055	chr15:72765604-72765605	Active TSS Enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region lncRNA	19 gene(s)	Overlapped CNVs	n/a
14	rs531525183	chr15:72765608-72765609	Active TSS Enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region lncRNA	19 gene(s)	Overlapped CNVs	n/a
15	rs549632394	chr15:72765637-72765638	Active TSS Enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region lncRNA	19 gene(s)	Overlapped CNVs	n/a
16	rs79865786	chr15:72765651-72765652	Active TSS Enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region lncRNA	20 gene(s)	Overlapped CNVs	n/a
17	rs532358359	chr15:72765659-72765660	Active TSS Enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region lncRNA	20 gene(s)	Overlapped CNVs	n/a
18	rs556640119	chr15:72765700-72765701	Active TSS Enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region lncRNA	19 gene(s)	Overlapped CNVs	n/a
19	rs547914992	chr15:72765722-72765723	Active TSS Enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region lncRNA	19 gene(s)	Overlapped CNVs	n/a
20	rs139725139	chr15:72765746-72765747	Active TSS Enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region lncRNA	19 gene(s)	Overlapped CNVs	n/a
21	rs149773655	chr15:72765819-72765820	Active TSS Enhancers Flanking Active TSS Weak transcription Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	19 gene(s)	Overlapped CNVs	n/a
22	rs548777948	chr15:72765824-72765825	Active TSS Enhancers Flanking Active TSS Weak transcription Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	21 gene(s)	Overlapped CNVs	n/a
23	rs570233672	chr15:72765836-72765837	Active TSS Enhancers Flanking Active TSS Weak transcription Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	21 gene(s)	Overlapped CNVs	n/a
24	rs537756495	chr15:72765856-72765857	Active TSS Enhancers Flanking Active TSS Weak transcription Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	21 gene(s)	Overlapped CNVs	n/a
25	rs34050997	chr15:72765862-72765863	Active TSS Enhancers Flanking Active TSS Weak transcription Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	21 gene(s)	Overlapped CNVs	n/a
26	rs559253678	chr15:72765864-72765865	Active TSS Enhancers Flanking Active TSS Weak transcription Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	21 gene(s)	Overlapped CNVs	n/a
27	rs571268765	chr15:72765878-72765879	Active TSS Enhancers Flanking Active TSS Weak transcription Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	21 gene(s)	Overlapped CNVs	n/a
28	rs556398475	chr15:72765879-72765880	Active TSS Enhancers Flanking Active TSS Weak transcription Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	21 gene(s)	Overlapped CNVs	n/a
29	rs538247369	chr15:72765880-72765881	Active TSS Enhancers Flanking Active TSS Weak transcription Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	21 gene(s)	Overlapped CNVs	n/a
30	rs186695976	chr15:72765887-72765888	Active TSS Enhancers Flanking Active TSS Weak transcription Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	21 gene(s)	Overlapped CNVs	n/a
31	rs572026036	chr15:72765929-72765930	Active TSS Enhancers Flanking Active TSS Weak transcription Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	22 gene(s)	Overlapped CNVs	n/a
32	rs542289460	chr15:72765964-72765965	Active TSS Enhancers Flanking Active TSS Weak transcription Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	23 gene(s)	Overlapped CNVs	n/a
33	rs189589376	chr15:72765982-72765983	Active TSS Enhancers Flanking Active TSS Weak transcription Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	23 gene(s)	Overlapped CNVs	n/a
34	rs75940117	chr15:72766057-72766058	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	25 gene(s)	Overlapped CNVs	n/a
35	rs575794807	chr15:72766081-72766082	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	26 gene(s)	Overlapped CNVs	n/a
36	rs72735145	chr15:72766119-72766120	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	29 gene(s)	Overlapped CNVs	n/a
37	rs564831993	chr15:72766155-72766156	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	30 gene(s)	Overlapped CNVs	n/a
38	rs532576113	chr15:72766356-72766357	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	39 gene(s)	Overlapped CNVs	n/a
39	rs545223887	chr15:72766371-72766372	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	39 gene(s)	Overlapped CNVs	n/a
40	rs559823841	chr15:72766388-72766389	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	38 gene(s)	Overlapped CNVs	n/a
41	rs144658946	chr15:72766441-72766442	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Weak transcription Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	39 gene(s)	Overlapped CNVs	n/a
42	rs115603782	chr15:72766458-72766459	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Weak transcription Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	39 gene(s)	Overlapped CNVs	n/a
43	rs548666702	chr15:72766474-72766475	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Weak transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	39 gene(s)	Overlapped CNVs	n/a
44	rs570272399	chr15:72766475-72766476	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Weak transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	39 gene(s)	Overlapped CNVs	n/a
45	rs531079263	chr15:72766517-72766518	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Weak transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	40 gene(s)	Overlapped CNVs	n/a
46	rs182614593	chr15:72766518-72766519	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Weak transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	40 gene(s)	Overlapped CNVs	n/a
47	rs552946198	chr15:72766602-72766603	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	40 gene(s)	Overlapped CNVs	n/a
48	rs571041362	chr15:72766608-72766609	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	41 gene(s)	Overlapped CNVs	n/a
49	rs568747610	chr15:72766612-72766613	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	41 gene(s)	Overlapped CNVs	n/a
50	rs58719663	chr15:72766614-72766615	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	41 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:76)

Disease	PMID	Source
Ewing''s sarcoma	21437220	CNVD
Schizophrenia	19415332	CNVD
Breast cancer	22522925	CNVD
Wilms tumour	21544195	CNVD
Testicular germ cell tumor	18059402	CNVD
cataract	16735990	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Medulloblastoma	21979893	CNVD
spastic paraplegia with thinning of corpus callosum	19105190	CNVD
Schizophrenia	21324950	CNVD
Astrocytoma	17387387	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Disease	21824424	CNVD
Melanoma	18172304	CNVD
Gastric cancer	17167181	CNVD
Neuroblastoma	19435921	CNVD
Colorectal cancer	19359472	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Colorectal cancer	16272173	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Multiple myeloma	17550852	CNVD
Intellectual disability	22102821	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute myeloid leukemia	20729466	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Multiple myeloma	20724749	CNVD
Lung cancer	18438408	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Prostate cancer	18632612	CNVD
small cell lung cancer	20016488	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Cancer	16751803	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Breast cancer	17133270	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Gastrointestinal stromal cancer	20877625	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Prostate cancer	16573809	CNVD
Autism	17322880	CNVD
Autism	20678247	CNVD
Retinoblastoma	21504564	CNVD
Matthew-Wood syndrome	21085971	CNVD
Myelofibrosis	22110671	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Urothelial cell carcinoma	18451213	CNVD
phobic disorder	16773131	CNVD
Autism	21480499	CNVD
Disorders of sex development	22290220	CNVD
Mental retardation	19951919	CNVD
Mental retardation	16773131	CNVD
T-cell lymphomas	19863542	CNVD
15q24 microdeletion syndrome	22180641	CNVD
15q24 microdeletion syndrome	19921647	CNVD
Disease	22216833	CNVD
Mental retardation	17360722	CNVD
15q24 microdeletion syndrome	22216833	CNVD
15q24 microdeletion syndrome	22283845	CNVD
Developmental delay	17932688	CNVD
craniofacial dysmorphism	17932688	CNVD
digital and genital abnormalities	17932688	CNVD
Mental retardation	17621639	CNVD
Autism	20808228	CNVD
Breast cancer	21364760	CNVD
Urothelial carcinoma	21177765	CNVD
Epilepsy	22083797	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
Pancreatic cancer	17952125	CNVD

Chromatin state (count:531 , 50 per page) page: 1 2 3 4 5 6 7 ... 11

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:72754600-72765400	Weak transcription	NHDF-Ad	bronchial
2	chr15:72754800-72765400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr15:72754800-72765400	Weak transcription	Brain Inferior Temporal Lobe	brain
4	chr15:72754800-72765400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
5	chr15:72754800-72765400	Weak transcription	Colon Smooth Muscle	Colon
6	chr15:72754800-72765400	Weak transcription	Fetal Lung	lung
7	chr15:72754800-72765400	Weak transcription	Placenta	Placenta
8	chr15:72754800-72765400	Weak transcription	Lung	lung
9	chr15:72754800-72765400	Weak transcription	Right Ventricle	heart
10	chr15:72754800-72765400	Weak transcription	Skeletal Muscle Female	skeletal muscle
11	chr15:72754800-72765600	Weak transcription	Fetal Muscle Trunk	muscle
12	chr15:72755000-72765400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
13	chr15:72755000-72765400	Weak transcription	Muscle Satellite Cultured Cells	--
14	chr15:72755000-72765400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
15	chr15:72755000-72765400	Weak transcription	Brain Cingulate Gyrus	brain
16	chr15:72755000-72765400	Weak transcription	Duodenum Smooth Muscle	Duodenum
17	chr15:72755000-72765600	Weak transcription	Left Ventricle	heart
18	chr15:72755000-72766000	Weak transcription	Ovary	ovary
19	chr15:72758600-72765400	Weak transcription	Sigmoid Colon	Sigmoid Colon
20	chr15:72759200-72765400	Weak transcription	Pancreas	Pancrea
21	chr15:72760400-72765400	Weak transcription	Duodenum Mucosa	Duodenum
22	chr15:72761000-72765400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
23	chr15:72761000-72766200	Weak transcription	Small Intestine	intestine
24	chr15:72762000-72765400	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
25	chr15:72762400-72765400	Weak transcription	Spleen	Spleen
26	chr15:72762800-72765400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
27	chr15:72763000-72765400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
28	chr15:72763200-72765400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
29	chr15:72763200-72765400	Weak transcription	Stomach Mucosa	stomach
30	chr15:72763800-72765400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
31	chr15:72764200-72765400	Weak transcription	Fetal Intestine Large	intestine
32	chr15:72764200-72765400	Weak transcription	Fetal Muscle Leg	muscle
33	chr15:72764400-72765400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
34	chr15:72764400-72765400	Weak transcription	Brain Anterior Caudate	brain
35	chr15:72764600-72765400	Enhancers	Breast Myoepithelial Primary Cells	Breast
36	chr15:72764600-72765400	Enhancers	Primary hematopoietic stem cells short term culture	blood
37	chr15:72764600-72765400	Enhancers	Primary T helper cells PMA-I stimulated	--
38	chr15:72764600-72765400	Enhancers	Primary T killer naive cells fromperipheralblood	blood
39	chr15:72764600-72765400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
40	chr15:72764800-72765400	Enhancers	Stomach Smooth Muscle	stomach
41	chr15:72764800-72765600	Enhancers	Primary T cells fromperipheralblood	blood
42	chr15:72764800-72765600	Enhancers	Primary hematopoietic stem cells	blood
43	chr15:72765000-72765400	Enhancers	Primary T cells from cord blood	blood
44	chr15:72765000-72765400	Enhancers	Primary T helper naive cells from peripheral blood	blood
45	chr15:72765000-72765400	Enhancers	Primary T helper naive cells fromperipheralblood	blood
46	chr15:72765000-72765400	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
47	chr15:72765000-72765400	Enhancers	Primary T helper cells fromperipheralblood	blood
48	chr15:72765000-72765400	Enhancers	Primary T killer memory cells from peripheral blood	blood
49	chr15:72765000-72765400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
50	chr15:72765000-72765400	Enhancers	Adipose Nuclei	Adipose

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