Variant report

Variant	nsv831613
Chromosome Location	chr9:72586058-72740061
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1889)
CpG islands
(count:488)
Chromatin interactive
region (count:47)
LncRNA
region (count:29)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1889 , 50 per page) page: 1 2 3 4 5 6 7 ... 38

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr9:72652942-72653681	HepG2	liver:	n/a	n/a
2	ARID3A	chr9:72732806-72733543	HepG2	liver:	n/a	n/a
3	ATF1	chr9:72652915-72653683	K562	blood:	n/a	n/a
4	ATF2	chr9:72645981-72646409	GM12878	blood:	n/a	n/a
5	ATF2	chr9:72658141-72658540	H1-hESC	embryonic stem cell:	n/a	n/a
6	ATF3	chr9:72645989-72646673	HCT-116	colon:	n/a	n/a
7	BACH1	chr9:72668667-72668675	H1-hESC	embryonic stem cell:	n/a	n/a
8	BACH1	chr9:72659293-72659810	H1-hESC	embryonic stem cell:	n/a	chr9:72659725-72659739
9	BACH1	chr9:72635231-72635403	H1-hESC	embryonic stem cell:	n/a	n/a
10	BATF	chr9:72653022-72653590	GM12878	blood:	n/a	n/a
11	BATF	chr9:72653001-72653590	GM12878	blood:	n/a	n/a
12	BCL11A	chr9:72653004-72653733	GM12878	blood:	n/a	n/a
13	BCL11A	chr9:72653027-72653579	GM12878	blood:	n/a	n/a
14	BHLHE40	chr9:72721326-72721464	K562	blood:	n/a	n/a
15	BHLHE40	chr9:72586930-72587122	K562	blood:	n/a	n/a
16	BHLHE40	chr9:72652915-72653599	HepG2	liver:	n/a	n/a
17	BHLHE40	chr9:72728434-72728713	GM12878	blood:	n/a	n/a
18	BRCA1	chr9:72653194-72653651	GM12878	blood:	n/a	n/a
19	BRCA1	chr9:72726873-72726877	Hela-S3	cervix:	n/a	n/a
20	BRCA1	chr9:72725908-72726266	H1-hESC	embryonic stem cell:	n/a	n/a
21	CBX3	chr9:72725812-72726414	HCT-116	colon:	n/a	n/a
22	CBX3	chr9:72668437-72669453	HCT-116	colon:	n/a	n/a
23	CBX3	chr9:72646012-72646752	HCT-116	colon:	n/a	n/a
24	CBX3	chr9:72725818-72726415	HCT-116	colon:	n/a	n/a
25	CBX3	chr9:72635788-72636290	HCT-116	colon:	n/a	n/a
26	CEBPB	chr9:72694647-72695114	A549	lung:	n/a	chr9:72694886-72694897 chr9:72694886-72694897 chr9:72694884-72694895 chr9:72694884-72694897 chr9:72694884-72694897
27	CEBPB	chr9:72738680-72739024	HepG2	liver:	n/a	chr9:72738845-72738856
28	CEBPB	chr9:72735499-72736157	IMR90	lung:	n/a	n/a
29	CEBPB	chr9:72694641-72694985	MCF-7	breast:	n/a	chr9:72694886-72694897 chr9:72694886-72694897 chr9:72694884-72694895 chr9:72694884-72694897 chr9:72694884-72694897
30	CEBPB	chr9:72712129-72712477	Hela-S3	cervix:	n/a	chr9:72712276-72712289 chr9:72712278-72712287 chr9:72712278-72712287 chr9:72712276-72712287 chr9:72712278-72712287
31	CEBPB	chr9:72728305-72728642	IMR90	lung:	n/a	n/a
32	CEBPB	chr9:72738741-72738899	HepG2	liver:	n/a	chr9:72738845-72738856
33	CEBPB	chr9:72628362-72628838	IMR90	lung:	n/a	chr9:72628538-72628549 chr9:72628536-72628549
34	CEBPB	chr9:72712131-72712465	H1-hESC	embryonic stem cell:	n/a	chr9:72712276-72712289 chr9:72712278-72712287 chr9:72712278-72712287 chr9:72712276-72712287 chr9:72712278-72712287
35	CEBPB	chr9:72738674-72739029	HepG2	liver:	n/a	chr9:72738845-72738856
36	CEBPB	chr9:72669987-72670238	A549	lung:	n/a	chr9:72670113-72670124 chr9:72670114-72670125 chr9:72670113-72670126 chr9:72670113-72670126
37	CEBPB	chr9:72645156-72645430	IMR90	lung:	n/a	n/a
38	CEBPB	chr9:72670032-72670232	K562	blood:	n/a	chr9:72670113-72670124 chr9:72670114-72670125 chr9:72670113-72670126 chr9:72670113-72670126
39	CEBPB	chr9:72594977-72595317	IMR90	lung:	n/a	n/a
40	CEBPB	chr9:72694685-72695066	HepG2	liver:	n/a	chr9:72694886-72694897 chr9:72694886-72694897 chr9:72694884-72694895 chr9:72694884-72694897 chr9:72694884-72694897
41	CEBPB	chr9:72645944-72646734	HCT-116	colon:	n/a	n/a
42	CEBPB	chr9:72694683-72695699	IMR90	lung:	n/a	chr9:72694886-72694897 chr9:72694886-72694897 chr9:72694884-72694895 chr9:72694884-72694897 chr9:72694884-72694897
43	CEBPB	chr9:72712106-72712467	HepG2	liver:	n/a	chr9:72712276-72712289 chr9:72712278-72712287 chr9:72712278-72712287 chr9:72712276-72712287 chr9:72712278-72712287
44	CEBPB	chr9:72694603-72695116	MCF-7	breast:	n/a	chr9:72694886-72694897 chr9:72694884-72694897 chr9:72694884-72694897 chr9:72694886-72694897 chr9:72694884-72694895
45	CEBPB	chr9:72738740-72738869	IMR90	lung:	n/a	chr9:72738845-72738856
46	CEBPB	chr9:72680589-72680789	HepG2	liver:	n/a	chr9:72680668-72680679 chr9:72680666-72680677
47	CEBPB	chr9:72685317-72685594	H1-hESC	embryonic stem cell:	n/a	chr9:72685430-72685443
48	CEBPB	chr9:72645928-72646565	HCT-116	colon:	n/a	n/a
49	CEBPB	chr9:72712779-72713051	Hela-S3	cervix:	n/a	chr9:72712881-72712898
50	CEBPB	chr9:72712128-72712399	K562	blood:	n/a	chr9:72712276-72712289 chr9:72712278-72712287 chr9:72712278-72712287 chr9:72712276-72712287 chr9:72712278-72712287

(count:488 , 50 per page) page: 1 2 3 4 5 6 7 ... 10

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr9:72659163-72659213	NHDF-neo	bronchial:	n/a
2	chr9:72658358-72658408	BE2_C	brain:	n/a
3	chr9:72660082-72660132	MCF-7	breast:	n/a
4	chr9:72660082-72660132	PANC-1	pancreas:	n/a
5	chr9:72655401-72655451	CMK	blood:	n/a
6	chr9:72665127-72665177	BJ	skin:	n/a
7	chr9:72735830-72735880	MCF-7	breast:	n/a
8	chr9:72655401-72655451	AG09309	skin:	n/a
9	chr9:72658358-72658408	BJ	skin:	n/a
10	chr9:72735830-72735880	GM12892	blood:	n/a
11	chr9:72659163-72659213	H1-hESC	embryonic stem cell:	embryo
12	chr9:72659163-72659213	AG09319	gingival:	n/a
13	chr9:72655401-72655451	HRCEpiC	kidney:	n/a
14	chr9:72658837-72658887	U87	brain:	n/a
15	chr9:72655401-72655451	MCF-7	breast:	n/a
16	chr9:72660082-72660132	NB4	blood:	n/a
17	chr9:72660082-72660132	SK-N-SH	brain:	n/a
18	chr9:72655401-72655451	Jurkat	blood:	n/a
19	chr9:72735830-72735880	Jurkat	blood:	n/a
20	chr9:72655401-72655451	HepG2	liver:	n/a
21	chr9:72735830-72735880	PANC-1	pancreas:	n/a
22	chr9:72658358-72658408	GM19239	blood:	n/a
23	chr9:72665127-72665177	HCF	heart:	n/a
24	chr9:72658358-72658408	HRE	kidney:	n/a
25	chr9:72658747-72658797	HepG2	liver:	n/a
26	chr9:72659163-72659213	LNCaP	prostate:	n/a
27	chr9:72658358-72658408	AG09319	gingival:	n/a
28	chr9:72658837-72658887	HCT-116	colon:	n/a
29	chr9:72660082-72660132	HMEC	breast:	n/a
30	chr9:72665127-72665177	LNCaP	prostate:	n/a
31	chr9:72658837-72658887	H1-hESC	embryonic stem cell:	embryo
32	chr9:72735830-72735880	MCF10A-Er-Src	breast:	n/a
33	chr9:72658837-72658887	PANC-1	pancreas:	n/a
34	chr9:72659163-72659213	SK-N-SH	brain:	n/a
35	chr9:72665127-72665177	MCF-7	breast:	n/a
36	chr9:72660082-72660132	AG04449	skin:	fetal
37	chr9:72660082-72660132	HCPEpiC	choroid plexus:	n/a
38	chr9:72658358-72658408	MCF10A-Er-Src	breast:	n/a
39	chr9:72655401-72655451	AoSMC	blood vessel:	n/a
40	chr9:72659163-72659213	ovcar-3	ovarian:	n/a
41	chr9:72658837-72658887	HEEpiC	esophagus:	n/a
42	chr9:72735830-72735880	HCT-116	colon:	n/a
43	chr9:72665127-72665177	HCPEpiC	choroid plexus:	n/a
44	chr9:72659163-72659213	HRE	kidney:	n/a
45	chr9:72658747-72658797	HAEpiC	amniotic membrane:	n/a
46	chr9:72655401-72655451	HCPEpiC	choroid plexus:	n/a
47	chr9:72665127-72665177	CMK	blood:	n/a
48	chr9:72658358-72658408	HNPCEpiC	eye:	n/a
49	chr9:72658837-72658887	SKMC	muscle:	n/a
50	chr9:72655401-72655451	PFSK-1	brain:	n/a

(count:47 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr9:72586692..72587617-chr9:72725591..72726665,4	MCF-7	breast:
2	chr9:72611748..72614537-chr9:72726027..72728626,2	MCF-7	breast:
3	chr9:72638407..72640762-chr9:72642071..72643641,2	K562	blood:
4	chr9:72625669..72627256-chr9:72629721..72631306,2	MCF-7	breast:
5	chr9:72596256..72598713-chr9:72601006..72603750,3	K562	blood:
6	chr9:72611748..72614537-chr9:72726027..72728626,2	MCF-7	breast:
7	chr9:72649187..72651016-chr9:72654412..72657228,2	K562	blood:
8	chr9:72650886..72653009-chr9:72653069..72655464,2	MCF-7	breast:
9	chr9:72586536..72587505-chr9:72725613..72726553,4	K562	blood:
10	chr9:72625669..72627256-chr9:72629721..72631306,2	MCF-7	breast:
11	chr9:72738878..72740762-chr9:72748344..72751164,2	MCF-7	breast:
12	chr9:72579585..72583057-chr9:72584421..72588172,5	K562	blood:
13	chr9:72588649..72589350-chr9:72728157..72729028,2	MCF-7	breast:
14	chr9:72625560..72627184-chr9:72663529..72666454,2	MCF-7	breast:
15	chr9:72655440..72657664-chr9:72659271..72661535,2	MCF-7	breast:
16	chr9:72602857..72604672-chr9:72606319..72607860,2	K562	blood:
17	chr9:72586692..72587617-chr9:72725591..72726665,4	MCF-7	breast:
18	chr9:72733654..72736603-chr9:72737665..72741649,3	MCF-7	breast:
19	chr9:72596256..72598713-chr9:72601006..72603750,3	K562	blood:
20	chr9:72625560..72627184-chr9:72663529..72666454,2	MCF-7	breast:
21	chr9:72735746..72736503-chr9:72844295..72845240,3	MCF-7	breast:
22	chr9:72637007..72638664-chr9:72645208..72646717,2	MCF-7	breast:
23	chr9:72690045..72693021-chr9:72707849..72710235,2	MCF-7	breast:
24	chr9:72586526..72587567-chr9:72725652..72726529,9	MCF-7	breast:
25	chr9:72649187..72651651-chr9:72654412..72657228,3	K562	blood:
26	chr9:72602857..72604672-chr9:72606319..72607860,2	K562	blood:
27	chr9:72637007..72638664-chr9:72645208..72646717,2	MCF-7	breast:
28	chr6:30582912..30585021-chr9:72685079..72686915,2	MCF-7	breast:
29	chr9:72586975..72587497-chr9:73124835..73125760,2	K562	blood:
30	chr9:72726384..72729356-chr9:72732064..72734127,2	MCF-7	breast:
31	chr9:72586580..72588000-chr9:72728026..72728995,9	MCF-7	breast:
32	chr9:72733654..72736603-chr9:72737665..72741649,3	MCF-7	breast:
33	chr9:72586526..72587567-chr9:72725652..72726529,9	MCF-7	breast:
34	chr9:72683149..72684713-chr9:72696505..72698897,2	K562	blood:
35	chr9:72649187..72651016-chr9:72654412..72657228,2	K562	blood:
36	chr9:72586559..72587592-chr9:72844298..72845151,6	K562	blood:
37	chr9:72649187..72651651-chr9:72654412..72657228,3	K562	blood:
38	chr9:72638407..72640762-chr9:72642071..72643641,2	K562	blood:
39	chr9:72586536..72587505-chr9:72725613..72726553,4	K562	blood:
40	chr9:72707394..72709089-chr9:72720199..72722050,2	K562	blood:
41	chr9:72683149..72684713-chr9:72696505..72698897,2	K562	blood:
42	chr17:62496286..62496984-chr9:72617693..72618495,2	MCF-7	breast:
43	chr9:72586588..72587213-chr9:72844309..72845161,2	MCF-7	breast:
44	chr9:72650886..72653009-chr9:72653069..72655464,2	MCF-7	breast:
45	chr9:72723556..72726029-chr9:72727042..72729559,2	K562	blood:
46	chr9:72726692..72728267-chr9:72871219..72873032,2	MCF-7	breast:
47	chr9:72655440..72657664-chr9:72659271..72661535,2	MCF-7	breast:

(count:29 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-KLF9-1	chr9:72705522-72705710	NONHSAT131795
2	lnc-KLF9-1	chr9:72708693-72708878	ENSG00000204706.10
3	lnc-KLF9-1	chr9:72702335-72702546	NONHSAT131795
4	lnc-KLF9-1	chr9:72703235-72703410	NONHSAT131793
5	lnc-KLF9-1	chr9:72728671-72728776	ENSG00000204706.10
6	lnc-KLF9-2	chr9:72702213-72702546	ENSG00000237778.1
7	lnc-KLF9-1	chr9:72702335-72702546	ENSG00000204706.10
8	lnc-KLF9-1	chr9:72728671-72728776	ENSG00000204706.10
9	lnc-KLF9-1	chr9:72702335-72702546	ENSG00000204706.10
10	lnc-KLF9-2	chr9:72703235-72703410	ENSG00000237778.1
11	lnc-KLF9-1	chr9:72700732-72702546	NONHSAT131793
12	lnc-KLF9-1	chr9:72703235-72703410	NONHSAT131795
13	lnc-KLF9-1	chr9:72702506-72702546	ENSG00000204706.10
14	lnc-KLF9-1	chr9:72720832-72720958	ENSG00000204706.10
15	lnc-KLF9-1	chr9:72703235-72703410	ENSG00000204706.10
16	lnc-KLF9-1	chr9:72703219-72703410	NONHSAT131797
17	lnc-KLF9-2	chr9:72728671-72728782	ENSG00000237778.1
18	lnc-KLF9-1	chr9:72705522-72705706	ENSG00000204706.10
19	lnc-KLF9-1	chr9:72702335-72702546	ENSG00000204706.10
20	lnc-KLF9-1	chr9:72728671-72728782	NONHSAT131797
21	lnc-KLF9-1	chr9:72703235-72703913	ENSG00000204706.10
22	lnc-KLF9-1	chr9:72728671-72728782	NONHSAT131793
23	lnc-KLF9-1	chr9:72703235-72703410	ENSG00000204706.10
24	lnc-KLF9-1	chr9:72700732-72702546	ENSG00000204706.10
25	lnc-KLF9-1	chr9:72703235-72703410	ENSG00000204706.10
26	lnc-KLF9-1	chr9:72707616-72707661	ENSG00000204706.10
27	lnc-KLF9-1	chr9:72703235-72703410	ENSG00000204706.10
28	lnc-KLF9-1	chr9:72724124-72724260	ENSG00000204706.10
29	lnc-KLF9-1	chr9:72707167-72707622	ENSG00000204706.10

No data

Variant related genes	Relation type
MAMDC2-AS1	TF binding region
MAMDC2	TF binding region
MAMDC2-AS1	CpG island
MAMDC2	CpG island
ENSG00000222894	chromatin interactions
ENSG00000265695	chromatin interactions
ENSG00000204706	chromatin interactions

Extended variants
information (count: 5539 )
Associated
traits (count: 68 )

Variant overlapped rSNPs/rCNVs (count:5539 , 50 per page) page: 1 2 3 4 5 6 7 ... 111

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs528046362	chr9:72586063-72586064	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs75446472	chr9:72586078-72586079	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs78292228	chr9:72586079-72586080	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs78703788	chr9:72586080-72586081	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs535341390	chr9:72586090-72586091	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs557213349	chr9:72586118-72586119	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs575198034	chr9:72586122-72586123	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs545795249	chr9:72586123-72586124	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs139382110	chr9:72586128-72586129	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs572943893	chr9:72586129-72586130	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs4330752	chr9:72586145-72586146	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs189628698	chr9:72586168-72586169	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs559645745	chr9:72586194-72586195	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs530434227	chr9:72586195-72586196	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs142577854	chr9:72586205-72586206	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs113623433	chr9:72586249-72586250	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs530839045	chr9:72586261-72586262	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs148546165	chr9:72586278-72586279	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs552134864	chr9:72586281-72586282	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs142865945	chr9:72586284-72586285	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs574895359	chr9:72586344-72586345	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs2035922	chr9:72586375-72586376	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
23	rs546775311	chr9:72586431-72586432	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs151045301	chr9:72586453-72586454	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs56126652	chr9:72586469-72586470	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs71503685	chr9:72586497-72586498	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs12347023	chr9:72586506-72586507	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
28	rs557002895	chr9:72586529-72586530	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs570787967	chr9:72586580-72586581	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs180864537	chr9:72586596-72586597	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs184543354	chr9:72586619-72586620	Enhancers Weak transcription Active TSS Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs557761096	chr9:72586635-72586636	Enhancers Weak transcription Active TSS Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs539741925	chr9:72586666-72586667	Enhancers Weak transcription Active TSS Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
34	rs369582461	chr9:72586674-72586675	Enhancers Weak transcription Active TSS Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs12342964	chr9:72586715-72586716	Enhancers Weak transcription Active TSS Flanking Active TSS	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
36	rs540292814	chr9:72586719-72586720	Enhancers Weak transcription Active TSS Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs117627311	chr9:72586769-72586770	Enhancers Weak transcription Active TSS Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
38	rs574978279	chr9:72586772-72586773	Enhancers Weak transcription Active TSS Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs566761387	chr9:72586788-72586789	Enhancers Weak transcription Active TSS Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
40	rs140689298	chr9:72586793-72586794	Enhancers Weak transcription Active TSS Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs35796520	chr9:72586847-72586848	Enhancers Weak transcription Flanking Active TSS Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs563858820	chr9:72586849-72586850	Enhancers Weak transcription Flanking Active TSS Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs564946534	chr9:72586910-72586911	Enhancers Weak transcription Flanking Active TSS Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs370859862	chr9:72586962-72586963	Enhancers Weak transcription Flanking Active TSS Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
45	rs73450502	chr9:72587059-72587060	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
46	rs545815219	chr9:72587079-72587080	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs144588252	chr9:72587087-72587088	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
48	rs528572725	chr9:72587093-72587094	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
49	rs373154635	chr9:72587119-72587120	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
50	rs555603028	chr9:72587121-72587122	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:68)

Disease	PMID	Source
Breast cancer	17133270	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
Medulloblastoma	21979893	CNVD
microdeletion syndrome	16199537	CNVD
Ovarian cancer	21720365	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Cancer	20164919	CNVD
Urothelial carcinoma	21177765	CNVD
Renal cell carcinoma	21668985	CNVD
Autism	22495311	CNVD
Melanoma	18172304	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Melanoma	22183965	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Cancer	16751803	CNVD
Myelofibrosis	22110671	CNVD
lymphocytic leukemia	21291569	CNVD
Leukemia	17361228	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Glioblastoma	16823260	CNVD
Leukemia	18688285	CNVD
Non-small cell lung cancer	21044232	CNVD
Brain cancer	20823417	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Astrocytoma	17387387	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Renal cell carcinoma	19461508	CNVD
Neuroblastoma	18923191	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Heart disease	21282601	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Lung cancer	18438408	CNVD
small cell lung cancer	20016488	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Acute myeloid leukemia	21251322	CNVD
Hepatocellular carcinoma	16750200	CNVD
Acute myeloid leukemia	20729466	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Breast cancer	17603634	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Oral cancer	21386901	CNVD
Epilepsy	22083797	CNVD
Glioblastoma multiforme	21750150	CNVD
Cancer	21183584	CNVD
Bipolar disorder	18458673	CNVD
Schizophrenia	23813976	CNVD
Breast cancer	22522925	CNVD
Intellectual disability	21811512	CNVD
Autism	21484199	CNVD
Breast cancer	22737080	CNVD
Malignant peripheral nerve sheath tumor	22811580	CNVD
Leprosy	22719964	CNVD
Primary ovarian insufficiency	22879975	CNVD
Malignant melanoma	17260012	CNVD
Pancreatic cancer	17952125	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:2887 , 50 per page) page: 1 2 3 4 5 6 7 ... 58

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:72580000-72586600	Weak transcription	HMEC	breast
2	chr9:72580400-72586400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr9:72580400-72586600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
4	chr9:72580400-72586800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
5	chr9:72580400-72590600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
6	chr9:72580600-72591000	Weak transcription	Cortex derived primary cultured neurospheres	brain
7	chr9:72580800-72586400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
8	chr9:72581400-72586400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
9	chr9:72584200-72591000	Weak transcription	Esophagus	oesophagus
10	chr9:72584400-72586600	Enhancers	NHDF-Ad	bronchial
11	chr9:72584400-72587200	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
12	chr9:72585000-72586400	Weak transcription	Muscle Satellite Cultured Cells	--
13	chr9:72585200-72587000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
14	chr9:72585200-72589800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
15	chr9:72585400-72587000	Enhancers	HSMMtube	muscle
16	chr9:72585600-72587200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
17	chr9:72585800-72586600	Weak transcription	H9 Cell Line	embryonic stem cell
18	chr9:72585800-72586600	Weak transcription	HUES48 Cell Line	embryonic stem cell
19	chr9:72585800-72586600	Weak transcription	Placenta	Placenta
20	chr9:72585800-72586600	Enhancers	Osteobl	bone
21	chr9:72585800-72586800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
22	chr9:72585800-72587200	Enhancers	NH-A	brain
23	chr9:72585800-72590400	Weak transcription	HUVEC	blood vessel
24	chr9:72585800-72590800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
25	chr9:72586000-72586400	Weak transcription	H1 Cell Line	embryonic stem cell
26	chr9:72586000-72586400	Weak transcription	NHLF	lung
27	chr9:72586400-72586800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
28	chr9:72586400-72587000	Enhancers	H1 Cell Line	embryonic stem cell
29	chr9:72586400-72587000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
30	chr9:72586400-72587000	Enhancers	Muscle Satellite Cultured Cells	--
31	chr9:72586400-72587200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
32	chr9:72586400-72587200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
33	chr9:72586400-72587200	Enhancers	NHLF	lung
34	chr9:72586600-72586800	Enhancers	Colon Smooth Muscle	Colon
35	chr9:72586600-72587000	Enhancers	H9 Cell Line	embryonic stem cell
36	chr9:72586600-72587000	Enhancers	HUES48 Cell Line	embryonic stem cell
37	chr9:72586600-72587000	Enhancers	Placenta	Placenta
38	chr9:72586600-72587000	Enhancers	Placenta Amnion	Placenta Amnion
39	chr9:72586600-72587000	Active TSS	Stomach Smooth Muscle	stomach
40	chr9:72586600-72587000	Flanking Active TSS	NHDF-Ad	bronchial
41	chr9:72586600-72587000	Flanking Active TSS	Osteobl	bone
42	chr9:72586600-72587200	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
43	chr9:72586600-72587200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
44	chr9:72586600-72587200	Enhancers	Fetal Muscle Leg	muscle
45	chr9:72586600-72587200	Enhancers	Rectal Mucosa Donor 31	rectum
46	chr9:72586600-72587200	Enhancers	Rectal Smooth Muscle	rectum
47	chr9:72586600-72587400	Enhancers	HMEC	breast
48	chr9:72586600-72587600	Enhancers	HSMM	muscle
49	chr9:72586600-72588000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
50	chr9:72586600-72588200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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