Variant report

Variant	nsv831667
Chromosome Location	chr9:102068047-102285691
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1744)
CpG islands
(count:366)
Chromatin interactive
region (count:102)
LncRNA
region (count:152)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1744 , 50 per page) page: 1 2 3 4 5 6 7 ... 35

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr9:102115872-102115898	HepG2	liver:	n/a	n/a
2	ATF1	chr9:102207944-102208118	K562	blood:	n/a	n/a
3	ATF1	chr9:102195907-102196103	K562	blood:	n/a	n/a
4	ATF2	chr9:102195795-102196271	GM12878	blood:	n/a	n/a
5	ATF2	chr9:102275997-102276419	GM12878	blood:	n/a	n/a
6	ATF2	chr9:102097528-102098027	GM12878	blood:	n/a	n/a
7	ATF2	chr9:102272056-102272554	GM12878	blood:	n/a	n/a
8	ATF2	chr9:102130458-102131029	GM12878	blood:	n/a	n/a
9	ATF2	chr9:102278147-102278948	GM12878	blood:	n/a	n/a
10	ATF2	chr9:102195755-102196202	GM12878	blood:	n/a	n/a
11	ATF2	chr9:102097538-102097981	GM12878	blood:	n/a	n/a
12	ATF2	chr9:102130479-102131020	GM12878	blood:	n/a	n/a
13	ATF2	chr9:102275904-102276590	GM12878	blood:	n/a	n/a
14	ATF3	chr9:102195871-102196208	K562	blood:	n/a	n/a
15	BACH1	chr9:102148270-102148424	H1-hESC	embryonic stem cell:	n/a	n/a
16	BATF	chr9:102253839-102254121	GM12878	blood:	n/a	n/a
17	BATF	chr9:102259936-102260269	GM12878	blood:	n/a	chr9:102260061-102260072
18	BATF	chr9:102084658-102084898	GM12878	blood:	n/a	n/a
19	BATF	chr9:102130604-102130891	GM12878	blood:	n/a	n/a
20	BATF	chr9:102178196-102178569	GM12878	blood:	n/a	chr9:102178390-102178401
21	BATF	chr9:102277418-102277659	GM12878	blood:	n/a	n/a
22	BATF	chr9:102195795-102196244	GM12878	blood:	n/a	chr9:102196014-102196025
23	BATF	chr9:102234597-102234848	GM12878	blood:	n/a	chr9:102234742-102234753
24	BATF	chr9:102178250-102178488	GM12878	blood:	n/a	chr9:102178390-102178401
25	BATF	chr9:102275990-102276375	GM12878	blood:	n/a	chr9:102276182-102276190
26	BATF	chr9:102097599-102098031	GM12878	blood:	n/a	n/a
27	BATF	chr9:102195870-102196200	GM12878	blood:	n/a	chr9:102196014-102196025
28	BATF	chr9:102275876-102276468	GM12878	blood:	n/a	chr9:102276182-102276190
29	BCL11A	chr9:102195765-102196203	GM12878	blood:	n/a	n/a
30	BCL11A	chr9:102195827-102196159	GM12878	blood:	n/a	n/a
31	BCL11A	chr9:102272075-102272410	GM12878	blood:	n/a	chr9:102272346-102272355
32	BCL11A	chr9:102097630-102097949	GM12878	blood:	n/a	n/a
33	BCL11A	chr9:102275974-102276329	GM12878	blood:	n/a	chr9:102276185-102276194
34	BCL11A	chr9:102130572-102130975	GM12878	blood:	n/a	n/a
35	BCL11A	chr9:102275913-102276411	GM12878	blood:	n/a	chr9:102276185-102276194 chr9:102275935-102275942
36	BCL11A	chr9:102254223-102254401	GM12878	blood:	n/a	chr9:102254316-102254325
37	BCL11A	chr9:102253867-102254397	GM12878	blood:	n/a	chr9:102254316-102254325 chr9:102254197-102254206
38	BCL11A	chr9:102130573-102130874	GM12878	blood:	n/a	n/a
39	BCL11A	chr9:102097532-102098008	GM12878	blood:	n/a	n/a
40	BCL3	chr9:102195818-102196232	GM12878	blood:	n/a	n/a
41	BCL3	chr9:102130588-102130936	GM12878	blood:	n/a	n/a
42	BCL3	chr9:102275930-102276338	GM12878	blood:	n/a	chr9:102276185-102276194 chr9:102275935-102275942
43	BCLAF1	chr9:102275839-102276395	GM12878	blood:	n/a	chr9:102276185-102276194 chr9:102275935-102275942
44	BCLAF1	chr9:102195788-102196197	GM12878	blood:	n/a	n/a
45	BCLAF1	chr9:102130497-102130953	GM12878	blood:	n/a	n/a
46	BCLAF1	chr9:102195770-102196275	GM12878	blood:	n/a	n/a
47	BCLAF1	chr9:102275824-102276502	GM12878	blood:	n/a	chr9:102276185-102276194 chr9:102275935-102275942
48	BHLHE40	chr9:102195970-102196170	HepG2	liver:	n/a	n/a
49	BHLHE40	chr9:102195867-102196183	GM12878	blood:	n/a	n/a
50	BHLHE40	chr9:102184217-102184307	K562	blood:	n/a	n/a

(count:366 , 50 per page) page: 1 2 3 4 5 6 7 8

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr9:102068578-102068628	HRE	kidney:	n/a
2	chr9:102068578-102068628	HCF	heart:	n/a
3	chr9:102068578-102068628	NB4	blood:	n/a
4	chr9:102195951-102196001	MCF-7	breast:	n/a
5	chr9:102131971-102132021	SK-N-SH	brain:	n/a
6	chr9:102195951-102196001	HCT-116	colon:	n/a
7	chr9:102181570-102181620	NHBE	bronchial:	n/a
8	chr9:102131971-102132021	NH-A	brain:	n/a
9	chr9:102131971-102132021	K562	blood:	n/a
10	chr9:102195951-102196001	PFSK-1	brain:	n/a
11	chr9:102068578-102068628	HIPEpiC	eye:	n/a
12	chr9:102123906-102123956	Hepatocyte	liver:	n/a
13	chr9:102195951-102196001	AG10803	skin:	n/a
14	chr9:102123906-102123956	MCF-7	breast:	n/a
15	chr9:102208423-102208473	RPTEC	kidney:	n/a
16	chr9:102123906-102123956	ovcar-3	ovarian:	n/a
17	chr9:102208423-102208473	BE2_C	brain:	n/a
18	chr9:102195951-102196001	HCF	heart:	n/a
19	chr9:102068578-102068628	CMK	blood:	n/a
20	chr9:102195951-102196001	U87	brain:	n/a
21	chr9:102123906-102123956	NT2-D1	testis:	n/a
22	chr9:102068578-102068628	PFSK-1	brain:	n/a
23	chr9:102181570-102181620	Hepatocyte	liver:	n/a
24	chr9:102068578-102068628	HAEpiC	amniotic membrane:	n/a
25	chr9:102131971-102132021	HRCEpiC	kidney:	n/a
26	chr9:102195951-102196001	Jurkat	blood:	n/a
27	chr9:102123906-102123956	HEEpiC	esophagus:	n/a
28	chr9:102208423-102208473	AG09319	gingival:	n/a
29	chr9:102195951-102196001	GM12891	blood:	n/a
30	chr9:102181570-102181620	BJ	skin:	n/a
31	chr9:102131971-102132021	HCM	heart:	n/a
32	chr9:102068578-102068628	HNPCEpiC	eye:	n/a
33	chr9:102195951-102196001	RPTEC	kidney:	n/a
34	chr9:102181570-102181620	SAEC	small airway:	n/a
35	chr9:102181570-102181620	NH-A	brain:	n/a
36	chr9:102208423-102208473	NHDF-neo	bronchial:	n/a
37	chr9:102208423-102208473	HRCEpiC	kidney:	n/a
38	chr9:102123906-102123956	Caco-2	colon:	n/a
39	chr9:102068578-102068628	Hepatocyte	liver:	n/a
40	chr9:102195951-102196001	AG09319	gingival:	n/a
41	chr9:102208423-102208473	HPAEpiC	pulmonary alveolar:	n/a
42	chr9:102181570-102181620	Caco-2	colon:	n/a
43	chr9:102068578-102068628	HMEC	breast:	n/a
44	chr9:102195951-102196001	AG04450	lung:	fetal
45	chr9:102208423-102208473	PANC-1	pancreas:	n/a
46	chr9:102181570-102181620	GM12878	blood:	n/a
47	chr9:102208423-102208473	HEEpiC	esophagus:	n/a
48	chr9:102181570-102181620	PFSK-1	brain:	n/a
49	chr9:102195951-102196001	ProgFib	skin:	n/a
50	chr9:102208423-102208473	HRPEpiC	eye:	n/a

(count:102 , 50 per page) page: 1 2 3

No.	Distal block	Cell Line	Cell type
1	chr9:102274808..102277751-chr9:102279288..102281593,3	K562	blood:
2	chr9:102075582..102078507-chr9:102082176..102085348,3	K562	blood:
3	chr9:102071163..102073683-chr9:102075008..102078219,3	K562	blood:
4	chr9:102107880..102109874-chr9:102111509..102114445,2	K562	blood:
5	chr9:102221979..102223697-chr9:102232085..102234861,2	MCF-7	breast:
6	chr9:102155138..102157259-chr9:102161978..102164201,2	MCF-7	breast:
7	chr9:102242622..102245826-chr9:102246104..102248631,3	K562	blood:
8	chr9:102071163..102073683-chr9:102075008..102078219,3	K562	blood:
9	chr9:102254590..102257220-chr9:102271994..102274020,2	MCF-7	breast:
10	chr9:102115579..102117316-chr9:102118690..102121559,2	K562	blood:
11	chr9:102067677..102069694-chr9:102073108..102075861,2	K562	blood:
12	chr9:102093486..102095614-chr9:102099567..102101533,2	K562	blood:
13	chr9:102280356..102283334-chr9:102298164..102300644,2	MCF-7	breast:
14	chr9:102121486..102123423-chr9:102126171..102128495,2	K562	blood:
15	chr9:102246315..102248635-chr9:102252582..102255186,2	K562	blood:
16	chr9:102196130..102198135-chr9:102198447..102201334,2	K562	blood:
17	chr9:102155138..102157259-chr9:102161978..102164201,2	MCF-7	breast:
18	chr9:102078412..102081069-chr9:102096216..102099504,3	K562	blood:
19	chr9:102179297..102181234-chr9:102181518..102183989,2	MCF-7	breast:
20	chr9:102242622..102245826-chr9:102246104..102250029,3	K562	blood:
21	chr9:102199715..102203075-chr9:102205928..102208429,4	MCF-7	breast:
22	chr9:102196130..102198135-chr9:102198447..102201334,2	K562	blood:
23	chr9:102162437..102164535-chr9:102169072..102171739,2	MCF-7	breast:
24	chr1:149223188..149225397-chr9:102200089..102202544,2	MCF-7	breast:
25	chr9:102179297..102181234-chr9:102181518..102183989,2	MCF-7	breast:
26	chr9:102165899..102167637-chr9:102167880..102169522,2	MCF-7	breast:
27	chr9:102107880..102109874-chr9:102111509..102114445,2	K562	blood:
28	chr9:102227904..102230696-chr9:102232714..102234931,2	K562	blood:
29	chr9:102236510..102239704-chr9:102241067..102243544,3	K562	blood:
30	chr9:102221979..102223697-chr9:102232085..102234861,2	MCF-7	breast:
31	chr9:102129944..102132650-chr9:102133086..102135348,2	MCF-7	breast:
32	chr9:102119898..102121684-chr9:102123596..102125157,2	K562	blood:
33	chr9:102179859..102182842-chr9:102183603..102185526,2	K562	blood:
34	chr9:102028630..102029376-chr9:102104555..102105135,2	MCF-7	breast:
35	chr9:102242622..102245826-chr9:102246104..102248631,3	K562	blood:
36	chr9:102063620..102065608-chr9:102086239..102088529,2	K562	blood:
37	chr9:102081255..102083343-chr9:102087064..102089487,2	K562	blood:
38	chr9:102071387..102073562-chr9:102086519..102088522,2	K562	blood:
39	chr9:102246315..102248635-chr9:102252582..102255186,2	K562	blood:
40	chr9:102199715..102203075-chr9:102205928..102208429,4	MCF-7	breast:
41	chr9:102075582..102078507-chr9:102082176..102085348,3	K562	blood:
42	chr9:102134969..102136668-chr9:102140239..102142904,2	MCF-7	breast:
43	chr9:102120874..102123601-chr9:102136796..102138588,2	MCF-7	breast:
44	chr9:102245945..102248685-chr9:102249633..102251313,2	K562	blood:
45	chr9:102142513..102144280-chr9:102150068..102152922,2	MCF-7	breast:
46	chr9:102093486..102095614-chr9:102099567..102101533,2	K562	blood:
47	chr9:102183276..102185319-chr9:102193925..102196644,2	MCF-7	breast:
48	chr9:102125792..102128409-chr9:102134620..102136717,2	MCF-7	breast:
49	chr9:102071387..102073562-chr9:102086519..102088522,2	K562	blood:
50	chr9:102125679..102127225-chr9:102136108..102139035,2	K562	blood:

(count:152 , 50 per page) page: 1 2 3 4

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ALG2-6	chr9:102129944-102130090	NONHSAT133671
2	lnc-ALG2-6	chr9:102122670-102122781	NONHSAT133657
3	lnc-ALG2-6	chr9:102129894-102130090	NONHSAT133673
4	lnc-ALG2-6	chr9:102132014-102132150	NONHSAT133654
5	lnc-ALG2-6	chr9:102132014-102132150	NONHSAT133655
6	lnc-KRT8P11-3	chr9:102192559-102192647	l_3823_chr9:102155132-102194472_brain
7	lnc-ALG2-6	chr9:102117691-102117864	NONHSAT133647
8	lnc-ALG2-6	chr9:102129894-102130000	NONHSAT133649
9	lnc-ALG2-6	chr9:102122670-102122781	NONHSAT133652
10	lnc-ALG2-6	chr9:102128681-102128798	NONHSAT133665
11	lnc-ALG2-6	chr9:102133136-102133738	NONHSAT133665
12	lnc-ALG2-6	chr9:102132014-102132150	NONHSAT133645
13	lnc-ALG2-6	chr9:102122670-102122781	NONHSAT133644
14	lnc-ALG2-6	chr9:102128681-102128798	NONHSAT133656
15	lnc-ALG2-6	chr9:102128699-102128798	ENSG00000271086.1
16	lnc-ALG2-6	chr9:102122670-102122781	ENSG00000271086.1
17	lnc-ALG2-6	chr9:102121914-102122159	NONHSAT133657
18	lnc-ALG2-6	chr9:102129943-102130090	NONHSAT133643
19	lnc-ALG2-6	chr9:102133136-102133738	NONHSAT133643
20	lnc-ALG2-6	chr9:102128681-102128798	NONHSAT133652
21	lnc-ALG2-6	chr9:102136151-102136255	NONHSAT133680
22	lnc-ALG2-6	chr9:102129943-102130090	NONHSAT133665
23	lnc-KRT8P11-3	chr9:102156100-102156198	l_3823_chr9:102155132-102194472_brain
24	lnc-KRT8P11-3	chr9:102194350-102194703	l_3823_chr9:102155132-102194472_brain
25	lnc-ALG2-6	chr9:102121667-102121791	NONHSAT133644
26	lnc-ALG2-6	chr9:102131102-102131196	ENSG00000271086.1
27	lnc-ALG2-6	chr9:102131174-102131229	NONHSAT133675
28	lnc-ALG2-6	chr9:102129943-102130090	NONHSAT133653
29	lnc-ALG2-6	chr9:102129944-102130090	NONHSAT133672
30	lnc-ALG2-6	chr9:102117691-102117864	NONHSAT133649
31	lnc-ALG2-6	chr9:102128681-102128798	NONHSAT133654
32	lnc-ALG2-6	chr9:102136288-102136689	NONHSAT133644
33	lnc-ALG2-6	chr9:102128733-102128798	NONHSAT133672
34	lnc-ALG2-6	chr9:102117622-102117884	NONHSAT133642
35	lnc-ALG2-6	chr9:102131103-102131212	NONHSAT133672
36	lnc-ALG2-6	chr9:102121667-102121791	NONHSAT133655
37	lnc-ALG2-6	chr9:102136288-102136469	NONHSAT133666
38	lnc-ALG2-6	chr9:102121667-102121791	NONHSAT133654
39	lnc-ALG2-6	chr9:102128681-102128798	NONHSAT133660
40	lnc-ALG2-6	chr9:102136150-102136303	NONHSAT133677
41	lnc-ALG2-6	chr9:102132014-102132150	NONHSAT133653
42	lnc-ALG2-6	chr9:102136564-102136689	NONHSAT133666
43	lnc-ALG2-6	chr9:102128681-102128798	NONHSAT133646
44	lnc-ALG2-6	chr9:102121667-102121791	NONHSAT133653
45	lnc-ALG2-6	chr9:102132015-102132150	NONHSAT133675
46	lnc-ALG2-6	chr9:102133137-102133264	NONHSAT133671
47	lnc-ALG2-6	chr9:102121667-102121791	NONHSAT133651
48	lnc-ALG2-6	chr9:102128682-102128755	NONHSAT133662
49	lnc-ALG2-6	chr9:102135204-102135396	NONHSAT133680
50	lnc-ALG2-6	chr9:102122670-102122781	NONHSAT133655

No data

Variant related genes	Relation type
NAMA	TF binding region
NAMA	CpG island
ENSG00000119523	chromatin interactions
ENSG00000271086	chromatin interactions
ENSG00000206737	chromatin interactions
ENSG00000106803	chromatin interactions

Extended variants
information (count: 6287 )
Associated
traits (count: 71 )

Variant overlapped rSNPs/rCNVs (count:6287 , 50 per page) page: 1 2 3 4 5 6 7 ... 126

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs184437	chr9:102068058-102068059	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs535596627	chr9:102068092-102068093	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
3	rs547098975	chr9:102068098-102068099	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
4	rs146806350	chr9:102068138-102068139	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
5	rs535864596	chr9:102068161-102068162	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
6	rs555429273	chr9:102068168-102068169	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
7	rs372233021	chr9:102068199-102068200	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
8	rs576018193	chr9:102068202-102068203	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
9	rs61910688	chr9:102068211-102068212	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
10	rs75723368	chr9:102068232-102068233	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
11	rs558488285	chr9:102068255-102068256	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
12	rs578232454	chr9:102068277-102068278	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
13	rs540457498	chr9:102068280-102068281	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
14	rs553045123	chr9:102068300-102068301	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
15	rs572821095	chr9:102068329-102068330	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
16	rs201870046	chr9:102068330-102068331	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
17	rs534421806	chr9:102068332-102068333	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
18	rs790287	chr9:102068344-102068345	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
19	rs193088722	chr9:102068369-102068370	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs530414030	chr9:102068377-102068378	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs544146001	chr9:102068431-102068432	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs115317691	chr9:102068455-102068456	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs145612968	chr9:102068480-102068481	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs546450443	chr9:102068491-102068492	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs61998194	chr9:102068492-102068493	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
26	rs185735044	chr9:102068502-102068503	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs549448272	chr9:102068515-102068516	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs201853578	chr9:102068519-102068520	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs569321636	chr9:102068521-102068522	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs538223761	chr9:102068555-102068556	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs567083616	chr9:102068659-102068660	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
32	rs367683281	chr9:102068660-102068661	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
33	rs558525936	chr9:102068666-102068667	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
34	rs200165007	chr9:102068678-102068679	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
35	rs571938696	chr9:102068684-102068685	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
36	rs371923383	chr9:102068715-102068716	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
37	rs112052036	chr9:102068754-102068755	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
38	rs374542789	chr9:102068755-102068756	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
39	rs7871150	chr9:102068770-102068771	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
40	rs572902294	chr9:102068794-102068795	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
41	rs541599601	chr9:102068828-102068829	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
42	rs170462	chr9:102068832-102068833	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
43	rs76004717	chr9:102068867-102068868	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
44	rs182704	chr9:102068912-102068913	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	mRNA abundance
45	rs564055500	chr9:102068957-102068958	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
46	rs55747399	chr9:102068963-102068964	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
47	rs533013083	chr9:102068996-102068997	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
48	rs540432181	chr9:102068999-102069000	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
49	rs560130980	chr9:102069021-102069022	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs529084568	chr9:102069024-102069025	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:71)

Disease	PMID	Source
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
Medulloblastoma	21979893	CNVD
microdeletion syndrome	16199537	CNVD
Ovarian cancer	21720365	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Cancer	20164919	CNVD
Urothelial carcinoma	21177765	CNVD
Renal cell carcinoma	21668985	CNVD
Autism	22495311	CNVD
Melanoma	18172304	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Cancer	16751803	CNVD
Myelofibrosis	22110671	CNVD
lymphocytic leukemia	21291569	CNVD
Leukemia	17361228	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Glioblastoma	16823260	CNVD
Leukemia	18688285	CNVD
Non-small cell lung cancer	21044232	CNVD
Brain cancer	20823417	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Astrocytoma	17387387	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Renal cell carcinoma	19461508	CNVD
Neuroblastoma	18923191	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Heart disease	21282601	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Lung cancer	18438408	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Acute myeloid leukemia	21251322	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Breast cancer	17603634	CNVD
Acute myeloid leukemia	20729466	CNVD
Oral cancer	21386901	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Wilms tumour	21544195	CNVD
Prostate cancer	18632612	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Gastric cancer	17908304	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Gastrointestinal stromal cancer	20877625	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
small cell lung cancer	20016488	CNVD
Intracranial aneurysm	16715129	CNVD
Cardiac fibroma	18329553	CNVD
Breast cancer	17133270	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Nicotine dependence	17160897	CNVD
Mantle cell lymphoma	19029149	CNVD
Esophageal cancer	21851588	CNVD
T-cell acute lymphoblastic leukemia	19406988	CNVD
Fukuyama congenital muscular dystrophy	21572526	CNVD
Testicular germ cell tumor	18059402	CNVD
Breast cancer	22522925	CNVD
Breast cancer	21364760	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:1435 , 50 per page) page: 1 2 3 4 5 6 7 ... 29

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:102059200-102068600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr9:102061800-102069400	Weak transcription	HUES64 Cell Line	embryonic stem cell
3	chr9:102062400-102070200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
4	chr9:102066600-102069800	Weak transcription	HUES6 Cell Line	embryonic stem cell
5	chr9:102066800-102069800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
6	chr9:102068000-102068200	Bivalent Enhancer	K562	blood
7	chr9:102068000-102070200	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
8	chr9:102068600-102069000	ZNF genes & repeats	iPS DF 19.11 Cell Line	embryonic stem cell
9	chr9:102069400-102070400	Enhancers	HUES64 Cell Line	embryonic stem cell
10	chr9:102069600-102070800	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
11	chr9:102069800-102070200	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
12	chr9:102069800-102070200	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
13	chr9:102069800-102070400	Enhancers	H1 Cell Line	embryonic stem cell
14	chr9:102069800-102070400	Enhancers	Placenta	Placenta
15	chr9:102069800-102070600	Enhancers	HUES6 Cell Line	embryonic stem cell
16	chr9:102069800-102070600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
17	chr9:102069800-102070800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
18	chr9:102070000-102070200	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
19	chr9:102070000-102070600	Enhancers	iPS-15b Cell Line	embryonic stem cell
20	chr9:102070200-102070600	Enhancers	ES-I3 Cell Line	embryonic stem cell
21	chr9:102070200-102071200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
22	chr9:102070800-102071400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
23	chr9:102071200-102072400	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
24	chr9:102071800-102072000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
25	chr9:102071800-102072400	Enhancers	GM12878-XiMat	blood
26	chr9:102084000-102084400	Enhancers	H1 Cell Line	embryonic stem cell
27	chr9:102084000-102084400	Enhancers	iPS-18 Cell Line	embryonic stem cell
28	chr9:102084000-102084600	Enhancers	HUES64 Cell Line	embryonic stem cell
29	chr9:102084000-102084800	Enhancers	iPS-15b Cell Line	embryonic stem cell
30	chr9:102084400-102084800	Enhancers	ES-I3 Cell Line	embryonic stem cell
31	chr9:102084800-102085200	Enhancers	Fetal Heart	heart
32	chr9:102087400-102087600	Enhancers	GM12878-XiMat	blood
33	chr9:102087600-102088200	Weak transcription	GM12878-XiMat	blood
34	chr9:102088200-102089000	Enhancers	GM12878-XiMat	blood
35	chr9:102088400-102088800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
36	chr9:102088400-102090000	Enhancers	Primary hematopoietic stem cells	blood
37	chr9:102088400-102090200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
38	chr9:102088800-102089400	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
39	chr9:102089400-102090000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
40	chr9:102089800-102090200	Enhancers	Breast Myoepithelial Primary Cells	Breast
41	chr9:102095600-102096000	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
42	chr9:102095600-102096000	Enhancers	HUVEC	blood vessel
43	chr9:102096000-102096400	Flanking Active TSS	HUVEC	blood vessel
44	chr9:102096400-102099400	Enhancers	HUVEC	blood vessel
45	chr9:102097200-102098400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
46	chr9:102097600-102097800	Enhancers	Brain Germinal Matrix	brain
47	chr9:102097600-102098000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
48	chr9:102097600-102098200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
49	chr9:102097600-102098400	Enhancers	Fetal Brain Female	brain
50	chr9:102098200-102099200	Enhancers	Rectal Smooth Muscle	rectum

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