Variant report

Variant	nsv832827
Chromosome Location	chr14:71676178-71833519
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:2680)
CpG islands
(count:1283)
Chromatin interactive
region (count:101)
LncRNA
region (count:54)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:2680 , 50 per page) page: 1 2 3 4 5 6 7 ... 54

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr14:71791433-71791950	K562	blood:	n/a	n/a
2	ARID3A	chr14:71786747-71787215	HepG2	liver:	n/a	n/a
3	ARID3A	chr14:71822547-71822809	K562	blood:	n/a	n/a
4	ARID3A	chr14:71788588-71789002	HepG2	liver:	n/a	n/a
5	ARID3A	chr14:71827818-71828991	K562	blood:	n/a	n/a
6	ARID3A	chr14:71803193-71803762	HepG2	liver:	n/a	n/a
7	ARID3A	chr14:71806367-71807106	K562	blood:	n/a	n/a
8	ARID3A	chr14:71787874-71787907	HepG2	liver:	n/a	n/a
9	ARID3A	chr14:71826683-71827315	K562	blood:	n/a	n/a
10	ARID3A	chr14:71789439-71789679	K562	blood:	n/a	n/a
11	ATF1	chr14:71698554-71698831	K562	blood:	n/a	n/a
12	ATF1	chr14:71828114-71828447	K562	blood:	n/a	n/a
13	ATF1	chr14:71727998-71728254	K562	blood:	n/a	n/a
14	ATF1	chr14:71791516-71791921	K562	blood:	n/a	n/a
15	ATF1	chr14:71822642-71822969	K562	blood:	n/a	n/a
16	ATF1	chr14:71806538-71806848	K562	blood:	n/a	n/a
17	ATF1	chr14:71829996-71830196	K562	blood:	n/a	n/a
18	ATF1	chr14:71786899-71787253	K562	blood:	n/a	n/a
19	ATF1	chr14:71695576-71695749	K562	blood:	n/a	n/a
20	ATF2	chr14:71786718-71787308	GM12878	blood:	n/a	n/a
21	ATF2	chr14:71786739-71787483	GM12878	blood:	n/a	n/a
22	ATF2	chr14:71786767-71787272	H1-hESC	embryonic stem cell:	n/a	n/a
23	ATF2	chr14:71794730-71795324	GM12878	blood:	n/a	n/a
24	ATF2	chr14:71824757-71825784	GM12878	blood:	n/a	n/a
25	ATF2	chr14:71786813-71787233	H1-hESC	embryonic stem cell:	n/a	n/a
26	ATF2	chr14:71757731-71758278	GM12878	blood:	n/a	n/a
27	ATF2	chr14:71791450-71792187	GM12878	blood:	n/a	n/a
28	ATF2	chr14:71824862-71825400	GM12878	blood:	n/a	n/a
29	ATF2	chr14:71733644-71734392	GM12878	blood:	n/a	n/a
30	ATF2	chr14:71733590-71734374	GM12878	blood:	n/a	n/a
31	ATF2	chr14:71791477-71792094	GM12878	blood:	n/a	n/a
32	ATF3	chr14:71786897-71787101	K562	blood:	n/a	n/a
33	ATF3	chr14:71786801-71787120	K562	blood:	n/a	n/a
34	ATF3	chr14:71830692-71830995	K562	blood:	n/a	n/a
35	BACH1	chr14:71688589-71688804	K562	blood:	n/a	n/a
36	BACH1	chr14:71688475-71688837	H1-hESC	embryonic stem cell:	n/a	n/a
37	BACH1	chr14:71786361-71787281	H1-hESC	embryonic stem cell:	n/a	n/a
38	BACH1	chr14:71826533-71826586	K562	blood:	n/a	n/a
39	BATF	chr14:71733636-71734280	GM12878	blood:	n/a	n/a
40	BATF	chr14:71733698-71734249	GM12878	blood:	n/a	n/a
41	BATF	chr14:71829068-71829324	GM12878	blood:	n/a	n/a
42	BATF	chr14:71787112-71787386	GM12878	blood:	n/a	n/a
43	BATF	chr14:71794851-71795169	GM12878	blood:	n/a	n/a
44	BATF	chr14:71800489-71800853	GM12878	blood:	n/a	n/a
45	BATF	chr14:71799289-71799501	GM12878	blood:	n/a	n/a
46	BATF	chr14:71829034-71829318	GM12878	blood:	n/a	n/a
47	BATF	chr14:71678810-71679025	GM12878	blood:	n/a	n/a
48	BATF	chr14:71815124-71815453	GM12878	blood:	n/a	n/a
49	BATF	chr14:71799237-71799505	GM12878	blood:	n/a	n/a
50	BATF	chr14:71791521-71791946	GM12878	blood:	n/a	n/a

(count:1283 , 50 per page) page: 1 2 3 4 5 6 7 ... 26

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr14:71788121-71788171	HMEC	breast:	n/a
2	chr14:71831132-71831182	AG10803	skin:	n/a
3	chr14:71788121-71788171	HMEC	breast:	n/a
4	chr14:71831132-71831182	AG10803	skin:	n/a
5	chr14:71788528-71788578	AG09319	gingival:	n/a
6	chr14:71787552-71787602	AG09319	gingival:	n/a
7	chr14:71786911-71786961	HMEC	breast:	n/a
8	chr14:71758942-71758992	NT2-D1	testis:	n/a
9	chr14:71803860-71803910	HIPEpiC	eye:	n/a
10	chr14:71791671-71791721	HRCEpiC	kidney:	n/a
11	chr14:71805172-71805222	Caco-2	colon:	n/a
12	chr14:71694874-71694924	NH-A	brain:	n/a
13	chr14:71803860-71803910	BE2_C	brain:	n/a
14	chr14:71791671-71791721	Hela-S3	cervix:	n/a
15	chr14:71791671-71791721	HEEpiC	esophagus:	n/a
16	chr14:71721323-71721373	ECC-1	luminal epithelium:	n/a
17	chr14:71787570-71787620	ECC-1	luminal epithelium:	n/a
18	chr14:71787996-71788046	ProgFib	skin:	n/a
19	chr14:71786911-71786961	A549	lung:	n/a
20	chr14:71712645-71712695	HRPEpiC	eye:	n/a
21	chr14:71712645-71712695	GM06990	blood:	n/a
22	chr14:71787215-71787265	ovcar-3	ovarian:	n/a
23	chr14:71786811-71786861	HUVEC	blood vessel:	n/a
24	chr14:71822452-71822502	ECC-1	luminal epithelium:	n/a
25	chr14:71694874-71694924	A549	lung:	n/a
26	chr14:71721323-71721373	SK-N-SH	brain:	n/a
27	chr14:71831132-71831182	AoSMC	blood vessel:	n/a
28	chr14:71722116-71722166	PrEC	prostate:	n/a
29	chr14:71791671-71791721	RPTEC	kidney:	n/a
30	chr14:71712645-71712695	HL-60	blood:	n/a
31	chr14:71787215-71787265	HEK293	kidney:	embryo
32	chr14:71822452-71822502	HAEpiC	amniotic membrane:	n/a
33	chr14:71787996-71788046	NHDF-neo	bronchial:	n/a
34	chr14:71788528-71788578	PrEC	prostate:	n/a
35	chr14:71787570-71787620	K562	blood:	n/a
36	chr14:71786911-71786961	HCF	heart:	n/a
37	chr14:71786911-71786961	H1-hESC	embryonic stem cell:	embryo
38	chr14:71694874-71694924	SKMC	muscle:	n/a
39	chr14:71831132-71831182	AG09319	gingival:	n/a
40	chr14:71758942-71758992	HCM	heart:	n/a
41	chr14:71786811-71786861	U87	brain:	n/a
42	chr14:71822452-71822502	HepG2	liver:	n/a
43	chr14:71694874-71694924	GM12878	blood:	n/a
44	chr14:71791671-71791721	AG09309	skin:	n/a
45	chr14:71786811-71786861	GM12878	blood:	n/a
46	chr14:71831132-71831182	HPAEpiC	pulmonary alveolar:	n/a
47	chr14:71822452-71822502	HCPEpiC	choroid plexus:	n/a
48	chr14:71687739-71687789	HRE	kidney:	n/a
49	chr14:71822452-71822502	Caco-2	colon:	n/a
50	chr14:71822452-71822502	SKMC	muscle:	n/a

(count:101 , 50 per page) page: 1 2 3

No.	Distal block	Cell Line	Cell type
1	chr14:71786395..71789209-chr14:71803171..71805833,4	MCF-7	breast:
2	chr14:71791876..71795993-chr14:71799711..71802625,3	MCF-7	breast:
3	chr14:71791240..71793345-chr14:71795264..71797079,2	MCF-7	breast:
4	chr14:71771730..71773986-chr14:71778512..71780433,2	MCF-7	breast:
5	chr14:71789768..71791635-chr14:71800055..71801739,2	MCF-7	breast:
6	chr14:71776798..71778756-chr14:71785140..71789113,3	MCF-7	breast:
7	chr14:71778151..71779948-chr14:71785349..71787251,2	MCF-7	breast:
8	chr14:71786721..71787223-chr19:9929449..9930057,2	NB4	blood:
9	chr14:71809579..71811386-chr14:71818060..71820070,2	MCF-7	breast:
10	chr14:71647115..71649453-chr14:71786412..71788278,2	MCF-7	breast:
11	chr14:71790563..71792922-chr14:71795158..71797926,2	MCF-7	breast:
12	chr14:71751009..71752632-chr14:71755324..71758116,2	MCF-7	breast:
13	chr14:71797494..71799680-chr14:71814031..71816377,2	K562	blood:
14	chr14:71715549..71717674-chr14:71721103..71723805,2	MCF-7	breast:
15	chr14:71780085..71783168-chr14:71784973..71787067,3	K562	blood:
16	chr14:71826599..71830201-chr14:71841493..71843609,3	K562	blood:
17	chr14:71826599..71830607-chr14:71841838..71843609,3	K562	blood:
18	chr14:71715549..71717674-chr14:71721103..71723805,2	MCF-7	breast:
19	chr14:71789121..71789661-chr14:71870291..71871015,2	MCF-7	breast:
20	chr14:71771730..71773986-chr14:71778512..71780433,2	MCF-7	breast:
21	chr14:71711940..71713445-chr14:71722921..71725630,2	MCF-7	breast:
22	chr14:71708680..71711261-chr14:71786150..71788899,2	MCF-7	breast:
23	chr14:71765803..71767626-chr14:71770739..71772740,2	K562	blood:
24	chr14:71800518..71803651-chr14:71803706..71805417,3	K562	blood:
25	chr1:151998303..152000885-chr14:71732498..71734961,2	MCF-7	breast:
26	chr14:71814160..71816838-chr14:71818197..71820269,2	K562	blood:
27	chr14:71797494..71799680-chr14:71814031..71816377,2	K562	blood:
28	chr14:71801351..71803651-chr14:71803706..71805302,3	K562	blood:
29	chr14:71801351..71803651-chr14:71803706..71805302,3	K562	blood:
30	chr14:71789873..71790710-chr8:48051511..48052153,2	MCF-7	breast:
31	chr14:71767096..71772420-chr14:71785571..71789384,7	MCF-7	breast:
32	chr14:71700024..71702819-chr14:71710024..71711999,2	MCF-7	breast:
33	chr14:71711940..71713445-chr14:71722921..71725630,2	MCF-7	breast:
34	chr14:71806633..71808372-chr14:71827930..71830217,2	K562	blood:
35	chr14:71787090..71788740-chr14:71796543..71798453,2	MCF-7	breast:
36	chr14:71785725..71788316-chr14:71827097..71829601,2	K562	blood:
37	chr14:71760323..71761838-chr14:71875710..71878506,2	MCF-7	breast:
38	chr14:71787090..71788740-chr14:71796543..71798453,2	MCF-7	breast:
39	chr14:71776798..71778756-chr14:71785140..71789113,3	MCF-7	breast:
40	chr14:71768291..71772700-chr14:71783468..71788933,6	MCF-7	breast:
41	chr14:71785991..71787659-chr14:71794952..71796874,2	K562	blood:
42	chr14:71789768..71791635-chr14:71800055..71801739,2	MCF-7	breast:
43	chr14:71633208..71633853-chr14:71776471..71777116,3	MCF-7	breast:
44	chr14:71632773..71633748-chr14:71775973..71776668,3	MCF-7	breast:
45	chr14:71688920..71691041-chr14:71691628..71693496,2	MCF-7	breast:
46	chr14:71806633..71808372-chr14:71827930..71830217,2	K562	blood:
47	chr14:71775069..71776742-chr14:71785163..71787953,2	MCF-7	breast:
48	chr14:71662526..71664078-chr14:71674837..71676717,2	K562	blood:
49	chr14:71700024..71702819-chr14:71710024..71711999,2	MCF-7	breast:
50	chr14:71815345..71818974-chr14:71820775..71823679,4	K562	blood:

(count:54 , 50 per page) page: 1 2

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-MAP3K9-3	chr14:71786174-71786271	XLOC_011064
2	lnc-SIPA1L1-4	chr14:71685817-71689441	ENSG00000269945.1
3	lnc-MAP3K9-3	chr14:71777929-71778076	ENSG00000259146.1
4	lnc-MAP3K9-3	chr14:71786174-71786271	XLOC_011064
5	lnc-SIPA1L1-1	chr14:71764774-71764863	XLOC_010868
6	lnc-SIPA1L1-2	chr14:71787839-71787898	NONHSAT037631
7	lnc-MAP3K9-3	chr14:71761980-71762173	ENSG00000259146.1
8	lnc-SIPA1L1-2	chr14:71820682-71821010	NONHSAT037636
9	lnc-MAP3K9-3	chr14:71777797-71778093	NONHSAT037628
10	lnc-MAP3K9-3	chr14:71786174-71786298	NONHSAT037628
11	lnc-MAP3K9-3	chr14:71786892-71787882	XLOC_011064
12	lnc-MAP3K9-3	chr14:71761980-71762173	XLOC_011064
13	lnc-MAP3K9-3	chr14:71777275-71777358	XLOC_011064
14	lnc-MAP3K9-3	chr14:71761979-71762509	XLOC_011064
15	lnc-MAP3K9-3	chr14:71788391-71788532	XLOC_011064
16	lnc-MAP3K9-3	chr14:71773895-71774080	XLOC_011064
17	lnc-PCNX-3	chr14:71679350-71679659	ENSG00000258517
18	lnc-MAP3K9-3	chr14:71788391-71788531	ENSG00000259146.1
19	lnc-MAP3K9-3	chr14:71777275-71777396	ENSG00000259146.1
20	lnc-SIPA1L1-2	chr14:71787190-71787220	NONHSAT037631
21	lnc-SIPA1L1-1	chr14:71761989-71762475	NONHSAT037621
22	lnc-MAP3K9-3	chr14:71777275-71777286	XLOC_011064
23	lnc-MAP3K9-3	chr14:71773887-71774080	ENSG00000259146.1
24	lnc-MAP3K9-3	chr14:71761920-71762173	XLOC_011064
25	lnc-MAP3K9-3	chr14:71761980-71762173	XLOC_011064
26	lnc-SIPA1L1-1	chr14:71760231-71761127	NONHSAT037616
27	lnc-SIPA1L1-1	chr14:71761992-71762290	XLOC_010868
28	lnc-SIPA1L1-1	chr14:71760761-71760926	NONHSAT037621
29	lnc-MAP3K9-3	chr14:71760863-71760873	XLOC_011064
30	lnc-MAP3K9-3	chr14:71777275-71777436	XLOC_011064
31	lnc-MAP3K9-3	chr14:71773908-71774080	XLOC_011064
32	lnc-MAP3K9-3	chr14:71777275-71777449	XLOC_011064
33	lnc-MAP3K9-3	chr14:71760684-71760997	XLOC_011064
34	lnc-MAP3K9-3	chr14:71788391-71788653	XLOC_011064
35	lnc-MAP3K9-3	chr14:71777275-71777328	XLOC_011064
36	lnc-MAP3K9-3	chr14:71761980-71762173	XLOC_011064
37	lnc-MAP3K9-3	chr14:71777275-71778093	XLOC_011064
38	lnc-MAP3K9-3	chr14:71777715-71778093	XLOC_011064
39	lnc-MAP3K9-3	chr14:71760754-71760997	ENSG00000259146.1
40	lnc-MAP3K9-3	chr14:71761980-71762173	XLOC_011064
41	lnc-MAP3K9-3	chr14:71761980-71762173	XLOC_011064
42	lnc-MAP3K9-3	chr14:71760771-71760873	XLOC_011064
43	lnc-MAP3K9-3	chr14:71786892-71787038	XLOC_011064
44	lnc-MAP3K9-3	chr14:71759518-71759619	XLOC_011064
45	lnc-MAP3K9-3	chr14:71759442-71759619	ENSG00000259146.1
46	lnc-MAP3K9-3	chr14:71759472-71759619	XLOC_011064
47	lnc-MAP3K9-3	chr14:71788499-71788530	XLOC_011064
48	lnc-MAP3K9-3	chr14:71760646-71760934	XLOC_011064
49	lnc-MAP3K9-3	chr14:71759472-71759619	XLOC_011064
50	lnc-MAP3K9-3	chr14:71761980-71762079	ENSG00000259146.1

No data

Variant related genes	Relation type
ENSG00000267901	TF binding region
ENSG00000269945	TF binding region
ENSG00000259079	TF binding region
ENSG00000258517	TF binding region
ENSG00000259146	TF binding region
SIPA1L1	TF binding region
ENSG00000267901	CpG island
ENSG00000269945	CpG island
ENSG00000259079	CpG island
ENSG00000258517	CpG island
ENSG00000259146	CpG island
SIPA1L1	CpG island
ENSG00000259079	chromatin interactions
ENSG00000127452	chromatin interactions
ENSG00000117308	chromatin interactions
ENSG00000258517	chromatin interactions
ENSG00000197555	chromatin interactions
ENSG00000259146	chromatin interactions
ENSG00000259907	chromatin interactions
ENSG00000269927	chromatin interactions
ENSG00000168906	chromatin interactions
ENSG00000207444	chromatin interactions
E2F3	miRNA target sites
PGGT1B	miRNA target sites
FAM76A	miRNA target sites
ABCA5	miRNA target sites
RBM46	miRNA target sites
AKAP12	miRNA target sites
WDR37	miRNA target sites
HELLS	miRNA target sites
ZNF451	miRNA target sites
CD46	miRNA target sites
HELZ	miRNA target sites

Extended variants
information (count: 5220 )
Associated
traits (count: 68 )

Variant overlapped rSNPs/rCNVs (count:5220 , 50 per page) page: 1 2 3 4 5 6 7 ... 105

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs550589421	chr14:71676207-71676208	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
2	rs117305922	chr14:71676271-71676272	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
3	rs536548903	chr14:71676274-71676275	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
4	rs111235717	chr14:71676364-71676365	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs150053102	chr14:71676378-71676379	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs6574010	chr14:71676385-71676386	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
7	rs145399773	chr14:71676473-71676474	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs187489519	chr14:71676488-71676489	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs578081185	chr14:71676498-71676499	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs545035705	chr14:71676567-71676568	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
11	rs28559286	chr14:71676569-71676570	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
12	rs536868984	chr14:71676692-71676693	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
13	rs192960221	chr14:71676747-71676748	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
14	rs561601926	chr14:71676752-71676753	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
15	rs184569565	chr14:71676786-71676787	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
16	rs566726257	chr14:71676858-71676859	Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
17	rs374028948	chr14:71677042-71677043	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs559538407	chr14:71677075-71677076	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs140249658	chr14:71677106-71677107	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs369993191	chr14:71677108-71677109	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs564963449	chr14:71677139-71677140	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs532241866	chr14:71677141-71677142	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs145240955	chr14:71677143-71677144	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs7400917	chr14:71677151-71677152	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs376698021	chr14:71677171-71677172	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs189122020	chr14:71677217-71677218	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs555394119	chr14:71677252-71677253	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs547089470	chr14:71677328-71677329	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs575437654	chr14:71677354-71677355	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs79080826	chr14:71677356-71677357	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs548062279	chr14:71677371-71677372	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs58438499	chr14:71677385-71677386	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
33	rs181735901	chr14:71677416-71677417	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs557533657	chr14:71677419-71677420	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs184512157	chr14:71677496-71677497	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs539147362	chr14:71677501-71677502	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
37	rs557039618	chr14:71677511-71677512	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
38	rs372984386	chr14:71677522-71677523	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
39	rs575581042	chr14:71677528-71677529	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
40	rs376594825	chr14:71677531-71677532	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
41	rs536673946	chr14:71677585-71677586	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
42	rs555299889	chr14:71677608-71677609	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
43	rs573619459	chr14:71677617-71677618	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs551866881	chr14:71677661-71677662	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs7144473	chr14:71677680-71677681	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
46	rs576833646	chr14:71677705-71677706	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs537742699	chr14:71677737-71677738	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs547240829	chr14:71677803-71677804	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs544308648	chr14:71677866-71677867	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs562475953	chr14:71677899-71677900	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:68)

Disease	PMID	Source
Esophageal cancer	21851588	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Retinoblastoma	21504564	CNVD
High-proliferative meningiomas	17937814	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Autism	22495311	CNVD
Non-small cell lung cancer	21044232	CNVD
Renal cell carcinoma	19461508	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Melanoma	18172304	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Medulloblastoma	21979893	CNVD
Oral cancer	21386901	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Hepatocellular carcinoma	22174799	CNVD
Neuroblastoma	19435921	CNVD
Colorectal cancer	19359472	CNVD
Breast cancer	17899364	CNVD
Gastrointestinal stromal cancer	19259404	CNVD
Gastrointestinal stromal cancer	17535989	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Paraganglioma	17535989	CNVD
Pulmonary chondroma	17535989	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Renal cell carcinoma	21668985	CNVD
Chronic myeloid leukemia	20724749	CNVD
Wilms tumour	21544195	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Urothelial carcinoma	21177765	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	21858162	CNVD
Lung cancer	18438408	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Colorectal cancer	16272173	CNVD
Breast cancer	22032731	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Colorectal cancer	16774939	CNVD
Malignant mesothelioma	18160781	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Ovarian cancer	21720365	CNVD
Splenic marginal zone lymphoma	18492102	CNVD
Neuroblastoma	18923191	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Barrett''s syndrome	19417022	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
small cell lung cancer	20016488	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Breast cancer	17133270	CNVD
Basal cell lymphoma	17053054	CNVD
cataract	16735990	CNVD
Neuroblastoma	20406844	CNVD
Hepatocellular carcinoma	16750200	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Multiple myeloma	17550852	CNVD
Myelofibrosis	22110671	CNVD
Heart disease	21282601	CNVD
Glioblastoma multiforme	21922591	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD

Chromatin state (count:2568 , 50 per page) page: 1 2 3 4 5 6 7 ... 52

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:71661200-71679400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr14:71669600-71677000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr14:71670200-71677200	Weak transcription	Spleen	Spleen
4	chr14:71674000-71676600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
5	chr14:71674000-71676600	Weak transcription	Brain Substantia Nigra	brain
6	chr14:71674000-71679200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
7	chr14:71674000-71680400	Weak transcription	Brain Inferior Temporal Lobe	brain
8	chr14:71674200-71676600	Weak transcription	Brain Anterior Caudate	brain
9	chr14:71674400-71679000	Weak transcription	Cortex derived primary cultured neurospheres	brain
10	chr14:71674600-71676400	Weak transcription	Brain Angular Gyrus	brain
11	chr14:71674600-71679200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
12	chr14:71674800-71676400	Weak transcription	Brain Cingulate Gyrus	brain
13	chr14:71675000-71676600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
14	chr14:71675600-71679200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
15	chr14:71676400-71677400	Enhancers	Brain Angular Gyrus	brain
16	chr14:71676400-71679800	Enhancers	Brain Cingulate Gyrus	brain
17	chr14:71676600-71677200	Enhancers	Breast Myoepithelial Primary Cells	Breast
18	chr14:71676600-71677200	Enhancers	Brain Anterior Caudate	brain
19	chr14:71676600-71677400	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
20	chr14:71676600-71677400	Enhancers	Brain Substantia Nigra	brain
21	chr14:71676600-71678000	Enhancers	Brain Hippocampus Middle	brain
22	chr14:71676800-71677000	Enhancers	ES-I3 Cell Line	embryonic stem cell
23	chr14:71676800-71677000	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
24	chr14:71677000-71677200	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
25	chr14:71677000-71677400	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
26	chr14:71677000-71679000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
27	chr14:71677200-71677400	Enhancers	Spleen	Spleen
28	chr14:71677200-71678400	Weak transcription	Brain Anterior Caudate	brain
29	chr14:71677200-71678800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
30	chr14:71677200-71679000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
31	chr14:71677400-71678400	Weak transcription	Brain Angular Gyrus	brain
32	chr14:71677400-71678800	Weak transcription	Brain Substantia Nigra	brain
33	chr14:71677400-71679000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
34	chr14:71677400-71679000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
35	chr14:71677400-71679200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
36	chr14:71677400-71679400	Weak transcription	Spleen	Spleen
37	chr14:71678000-71679000	Weak transcription	Brain Hippocampus Middle	brain
38	chr14:71678400-71679400	Enhancers	Brain Angular Gyrus	brain
39	chr14:71678400-71679600	Enhancers	Brain Anterior Caudate	brain
40	chr14:71678800-71679800	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
41	chr14:71678800-71679800	Enhancers	GM12878-XiMat	blood
42	chr14:71678800-71681000	Enhancers	Dnd41	blood
43	chr14:71679000-71679200	Enhancers	Brain Substantia Nigra	brain
44	chr14:71679000-71679400	Enhancers	Brain Hippocampus Middle	brain
45	chr14:71679000-71679400	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
46	chr14:71679000-71679600	Enhancers	Cortex derived primary cultured neurospheres	brain
47	chr14:71679000-71679800	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
48	chr14:71679000-71679800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
49	chr14:71679000-71679800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
50	chr14:71679000-71679800	Enhancers	Breast Myoepithelial Primary Cells	Breast

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links