No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs538707374 |
chr9:19126026-19126027 |
Genic enhancers Weak transcription Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS Enhancers Active TSS
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
2 |
rs371542285 |
chr9:19126064-19126065 |
Genic enhancers Weak transcription Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS Enhancers Active TSS
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs145379948 |
chr9:19126065-19126066 |
Genic enhancers Weak transcription Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS Enhancers Active TSS
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs534384463 |
chr9:19126071-19126072 |
Genic enhancers Weak transcription Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS Enhancers Active TSS
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
5 |
rs369552243 |
chr9:19126074-19126075 |
Genic enhancers Weak transcription Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS Enhancers Active TSS
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs60329524 |
chr9:19126082-19126083 |
Genic enhancers Weak transcription Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS Enhancers Active TSS
|
Chromatin interactive region
|
5 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
7 |
rs34801012 |
chr9:19126123-19126124 |
Genic enhancers Weak transcription Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS Enhancers Active TSS
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs149124591 |
chr9:19126124-19126125 |
Genic enhancers Weak transcription Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS Enhancers Active TSS
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs537861405 |
chr9:19126132-19126133 |
Genic enhancers Weak transcription Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS Enhancers Active TSS
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs556486821 |
chr9:19126139-19126140 |
Genic enhancers Weak transcription Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS Enhancers Active TSS
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs11555396 |
chr9:19126170-19126171 |
Genic enhancers Weak transcription Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS Enhancers Active TSS
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs369960006 |
chr9:19126185-19126186 |
Genic enhancers Weak transcription Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS Enhancers Active TSS
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs200362155 |
chr9:19126271-19126272 |
Transcr. at gene 5' and 3' Active TSS Genic enhancers Enhancers Strong transcription Flanking Active TSS Weak transcription Bivalent/Poised TSS
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs2228416 |
chr9:19126281-19126282 |
Transcr. at gene 5' and 3' Active TSS Genic enhancers Enhancers Strong transcription Flanking Active TSS Weak transcription Bivalent/Poised TSS
|
Chromatin interactive region
|
5 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
15 |
rs202143072 |
chr9:19126285-19126286 |
Transcr. at gene 5' and 3' Active TSS Genic enhancers Enhancers Strong transcription Flanking Active TSS Weak transcription Bivalent/Poised TSS
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs201024699 |
chr9:19126295-19126296 |
Transcr. at gene 5' and 3' Active TSS Genic enhancers Enhancers Strong transcription Flanking Active TSS Weak transcription Bivalent/Poised TSS
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs142216441 |
chr9:19126307-19126308 |
Transcr. at gene 5' and 3' Active TSS Genic enhancers Enhancers Strong transcription Flanking Active TSS Weak transcription Bivalent/Poised TSS
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs41269017 |
chr9:19126313-19126314 |
Transcr. at gene 5' and 3' Active TSS Genic enhancers Enhancers Strong transcription Flanking Active TSS Weak transcription Bivalent/Poised TSS
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs55918606 |
chr9:19126361-19126362 |
Transcr. at gene 5' and 3' Active TSS Genic enhancers Enhancers Strong transcription Flanking Active TSS Weak transcription Bivalent/Poised TSS
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs377347620 |
chr9:19126364-19126365 |
Transcr. at gene 5' and 3' Active TSS Genic enhancers Enhancers Strong transcription Flanking Active TSS Weak transcription Bivalent/Poised TSS
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
21 |
rs151198176 |
chr9:19126372-19126373 |
Transcr. at gene 5' and 3' Active TSS Genic enhancers Enhancers Strong transcription Flanking Active TSS Weak transcription Bivalent/Poised TSS
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
22 |
rs151104975 |
chr9:19126395-19126396 |
Transcr. at gene 5' and 3' Active TSS Genic enhancers Enhancers Strong transcription Flanking Active TSS Weak transcription Bivalent/Poised TSS
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs72561717 |
chr9:19126396-19126397 |
Transcr. at gene 5' and 3' Active TSS Genic enhancers Enhancers Strong transcription Flanking Active TSS Weak transcription Bivalent/Poised TSS
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
24 |
rs201349928 |
chr9:19126424-19126425 |
Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers Bivalent/Poised TSS
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs111903968 |
chr9:19126431-19126432 |
Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers Bivalent/Poised TSS
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
26 |
rs373607837 |
chr9:19126452-19126453 |
Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers Bivalent/Poised TSS
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs377389478 |
chr9:19126470-19126471 |
Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers Bivalent/Poised TSS
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
28 |
rs561034741 |
chr9:19126472-19126473 |
Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers Bivalent/Poised TSS
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
29 |
rs531596979 |
chr9:19126473-19126474 |
Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers Bivalent/Poised TSS
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
30 |
rs3802335 |
chr9:19126476-19126477 |
Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers Bivalent/Poised TSS
|
Chromatin interactive region
|
6 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
31 |
rs564899921 |
chr9:19126479-19126480 |
Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers Bivalent/Poised TSS
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
32 |
rs558943812 |
chr9:19126494-19126495 |
Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers Bivalent/Poised TSS
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
33 |
rs182894266 |
chr9:19126502-19126503 |
Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers Bivalent/Poised TSS
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
34 |
rs565779277 |
chr9:19126526-19126527 |
Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers Bivalent/Poised TSS
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
35 |
rs375319845 |
chr9:19126529-19126530 |
Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers Bivalent/Poised TSS
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
36 |
rs187446738 |
chr9:19126562-19126563 |
Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers Bivalent/Poised TSS
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
37 |
rs3824369 |
chr9:19126565-19126566 |
Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers Bivalent/Poised TSS
|
Chromatin interactive region
|
6 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
38 |
rs113861614 |
chr9:19126584-19126585 |
Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers Bivalent/Poised TSS
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
39 |
rs191029143 |
chr9:19126599-19126600 |
Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers Bivalent/Poised TSS
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
40 |
rs113038645 |
chr9:19126604-19126605 |
Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers Bivalent/Poised TSS
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
41 |
rs556844782 |
chr9:19126605-19126606 |
Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers Bivalent/Poised TSS
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
42 |
rs556559570 |
chr9:19126643-19126644 |
Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers Bivalent/Poised TSS
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
43 |
rs577651170 |
chr9:19126671-19126672 |
Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers Bivalent/Poised TSS
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
44 |
rs538643942 |
chr9:19126675-19126676 |
Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers Bivalent/Poised TSS
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
45 |
rs553851261 |
chr9:19126678-19126679 |
Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers Bivalent/Poised TSS
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
46 |
rs372302800 |
chr9:19126700-19126701 |
Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers Bivalent/Poised TSS
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
47 |
rs182824767 |
chr9:19126714-19126715 |
Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers Bivalent/Poised TSS
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
48 |
rs187074954 |
chr9:19126723-19126724 |
Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers Bivalent/Poised TSS
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
49 |
rs574956373 |
chr9:19126738-19126739 |
Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers Bivalent/Poised TSS
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
50 |
rs574856365 |
chr9:19126765-19126766 |
Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers Bivalent/Poised TSS
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|