Variant report

Variant nsv871943
Chromosome Location chr1:57784144-57855876
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:386 , 50 per page) page: 1 2 3 4 5 6 7 8
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:57773200-57790200 Weak transcription ES-I3 Cell Line embryonic stem cell
2 chr1:57776600-57790200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr1:57779800-57784800 Weak transcription Fetal Intestine Large intestine
4 chr1:57779800-57784800 Weak transcription Fetal Intestine Small intestine
5 chr1:57780400-57784600 Weak transcription Brain Angular Gyrus brain
6 chr1:57780400-57787000 Weak transcription Fetal Brain Male brain
7 chr1:57782000-57784600 Weak transcription Fetal Brain Female brain
8 chr1:57784000-57785000 Weak transcription iPS-15b Cell Line embryonic stem cell
9 chr1:57784000-57785400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
10 chr1:57784600-57784800 Enhancers Brain Angular Gyrus brain
11 chr1:57784600-57785000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr1:57784600-57785200 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr1:57784600-57785200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
14 chr1:57784600-57785200 Enhancers Brain Dorsolateral Prefrontal Cortex brain
15 chr1:57784600-57785200 Enhancers Fetal Muscle Leg muscle
16 chr1:57784600-57785400 Enhancers HUES6 Cell Line embryonic stem cell
17 chr1:57784600-57785400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
18 chr1:57784600-57785400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr1:57784600-57785400 Enhancers Fetal Brain Female brain
20 chr1:57784600-57785600 Enhancers Cortex derived primary cultured neurospheres brain
21 chr1:57784600-57785600 Enhancers Hela-S3 cervix
22 chr1:57784600-57785800 Enhancers Primary T helper 17 cells PMA-I stimulated --
23 chr1:57784600-57785800 Enhancers Fetal Lung lung
24 chr1:57784600-57786000 Enhancers Duodenum Mucosa Duodenum
25 chr1:57784800-57785200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr1:57784800-57785200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr1:57784800-57785200 Enhancers HMEC breast
28 chr1:57784800-57785400 Enhancers NHEK skin
29 chr1:57784800-57785600 Weak transcription Brain Angular Gyrus brain
30 chr1:57784800-57785600 Enhancers Fetal Stomach stomach
31 chr1:57784800-57786000 Enhancers Fetal Intestine Large intestine
32 chr1:57784800-57786000 Enhancers Fetal Intestine Small intestine
33 chr1:57785000-57785400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
34 chr1:57785200-57790000 Weak transcription iPS-15b Cell Line embryonic stem cell
35 chr1:57785200-57793800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr1:57785400-57790400 Weak transcription Fetal Brain Female brain
37 chr1:57785600-57785800 Enhancers Brain Angular Gyrus brain
38 chr1:57786000-57787000 Weak transcription Fetal Intestine Large intestine
39 chr1:57786000-57789800 Weak transcription Fetal Intestine Small intestine
40 chr1:57786000-57790200 Weak transcription Duodenum Mucosa Duodenum
41 chr1:57787000-57787200 Enhancers Brain Dorsolateral Prefrontal Cortex brain
42 chr1:57787000-57787200 Enhancers Fetal Brain Male brain
43 chr1:57787000-57787600 Enhancers Fetal Intestine Large intestine
44 chr1:57787200-57793800 Weak transcription Fetal Brain Male brain
45 chr1:57787400-57787600 Enhancers Cortex derived primary cultured neurospheres brain
46 chr1:57787600-57789800 Weak transcription Fetal Intestine Large intestine
47 chr1:57789800-57790400 Enhancers HUES48 Cell Line embryonic stem cell
48 chr1:57789800-57792400 Enhancers Fetal Intestine Small intestine
49 chr1:57789800-57792600 Enhancers Fetal Intestine Large intestine
50 chr1:57790000-57790800 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived

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