Variant report

Variant	nsv872223
Chromosome Location	chr1:145294531-145394955
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1727)
CpG islands
(count:1347)
Chromatin interactive
region (count:234)
LncRNA
region (count:31)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1727 , 50 per page) page: 1 2 3 4 5 6 7 ... 35

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr1:145382372-145383307	HepG2	liver:	n/a	n/a
2	ARID3A	chr1:145382074-145383359	K562	blood:	n/a	n/a
3	ARID3A	chr1:145384459-145384818	HepG2	liver:	n/a	n/a
4	ARID3A	chr1:145390760-145391232	HepG2	liver:	n/a	n/a
5	ATF1	chr1:145382072-145383169	K562	blood:	n/a	n/a
6	ATF2	chr1:145382258-145383454	GM12878	blood:	n/a	n/a
7	ATF2	chr1:145382202-145383239	H1-hESC	embryonic stem cell:	n/a	n/a
8	ATF2	chr1:145382163-145383248	H1-hESC	embryonic stem cell:	n/a	n/a
9	ATF2	chr1:145382293-145383421	GM12878	blood:	n/a	n/a
10	ATF3	chr1:145382569-145383280	A549	lung:	n/a	n/a
11	ATF3	chr1:145382687-145383291	HCT-116	colon:	n/a	n/a
12	ATF3	chr1:145382543-145383238	A549	lung:	n/a	n/a
13	ATF3	chr1:145382258-145382630	K562	blood:	n/a	chr1:145382499-145382512 chr1:145382411-145382422 chr1:145382498-145382513
14	ATF3	chr1:145382145-145383324	K562	blood:	n/a	chr1:145382499-145382512 chr1:145382411-145382422 chr1:145382498-145382513
15	BACH1	chr1:145382024-145383427	K562	blood:	n/a	n/a
16	BATF	chr1:145369205-145369460	GM12878	blood:	n/a	n/a
17	BATF	chr1:145299644-145300057	GM12878	blood:	n/a	n/a
18	BATF	chr1:145351628-145351787	GM12878	blood:	n/a	n/a
19	BATF	chr1:145323297-145323456	GM12878	blood:	n/a	n/a
20	BATF	chr1:145296892-145297102	GM12878	blood:	n/a	n/a
21	BATF	chr1:145362622-145362781	GM12878	blood:	n/a	n/a
22	BATF	chr1:145337454-145337613	GM12878	blood:	n/a	n/a
23	BATF	chr1:145296560-145296816	GM12878	blood:	n/a	n/a
24	BATF	chr1:145368329-145368784	GM12878	blood:	n/a	n/a
25	BATF	chr1:145380125-145380328	GM12878	blood:	n/a	chr1:145380296-145380307
26	BATF	chr1:145382580-145383156	GM12878	blood:	n/a	n/a
27	BATF	chr1:145356362-145356521	GM12878	blood:	n/a	n/a
28	BATF	chr1:145382295-145383361	GM12878	blood:	n/a	n/a
29	BATF	chr1:145310436-145310883	GM12878	blood:	n/a	chr1:145310669-145310677
30	BATF	chr1:145304760-145305106	GM12878	blood:	n/a	n/a
31	BATF	chr1:145297112-145297381	GM12878	blood:	n/a	n/a
32	BATF	chr1:145390019-145390330	GM12878	blood:	n/a	n/a
33	BATF	chr1:145304748-145305052	GM12878	blood:	n/a	n/a
34	BATF	chr1:145380118-145380478	GM12878	blood:	n/a	chr1:145380296-145380307
35	BATF	chr1:145369080-145369247	GM12878	blood:	n/a	n/a
36	BATF	chr1:145346898-145347057	GM12878	blood:	n/a	n/a
37	BATF	chr1:145368315-145369169	GM12878	blood:	n/a	n/a
38	BATF	chr1:145342174-145342333	GM12878	blood:	n/a	n/a
39	BATF	chr1:145310440-145310923	GM12878	blood:	n/a	chr1:145310669-145310677
40	BCL11A	chr1:145371671-145371949	GM12878	blood:	n/a	n/a
41	BCL11A	chr1:145297159-145297370	GM12878	blood:	n/a	n/a
42	BCL11A	chr1:145299433-145299718	GM12878	blood:	n/a	n/a
43	BCL11A	chr1:145382691-145383032	H1-hESC	embryonic stem cell:	n/a	chr1:145382725-145382738 chr1:145382725-145382738
44	BCL11A	chr1:145389934-145390292	GM12878	blood:	n/a	n/a
45	BCL11A	chr1:145296860-145297100	GM12878	blood:	n/a	n/a
46	BCL11A	chr1:145382391-145383164	GM12878	blood:	n/a	chr1:145382434-145382447 chr1:145382433-145382446 chr1:145382657-145382670 chr1:145382725-145382738 chr1:145382599-145382612 chr1:145382725-145382738
47	BCL11A	chr1:145310475-145310707	GM12878	blood:	n/a	n/a
48	BCL11A	chr1:145298382-145298544	GM12878	blood:	n/a	n/a
49	BCL11A	chr1:145368357-145368693	GM12878	blood:	n/a	n/a
50	BCL11A	chr1:145368785-145368995	GM12878	blood:	n/a	n/a

(count:1347 , 50 per page) page: 1 2 3 4 5 6 7 ... 27

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr1:145384929-145384979	HMEC	breast:	n/a
2	chr1:145382734-145382784	Hela-S3	cervix:	n/a
3	chr1:145302551-145302601	AG09309	skin:	n/a
4	chr1:145382734-145382784	T-47D	breast:	n/a
5	chr1:145385524-145385574	SK-N-SH	brain:	n/a
6	chr1:145384929-145384979	HMEC	breast:	n/a
7	chr1:145382734-145382784	Hela-S3	cervix:	n/a
8	chr1:145302551-145302601	AG09309	skin:	n/a
9	chr1:145382734-145382784	T-47D	breast:	n/a
10	chr1:145385524-145385574	SK-N-SH	brain:	n/a
11	chr1:145366524-145366574	ovcar-3	ovarian:	n/a
12	chr1:145375603-145375653	MCF-7	breast:	n/a
13	chr1:145302551-145302601	HPAEpiC	pulmonary alveolar:	n/a
14	chr1:145389393-145389443	Hepatocyte	liver:	n/a
15	chr1:145375603-145375653	GM12891	blood:	n/a
16	chr1:145389393-145389443	AoSMC	blood vessel:	n/a
17	chr1:145385677-145385727	RPTEC	kidney:	n/a
18	chr1:145385299-145385349	PFSK-1	brain:	n/a
19	chr1:145378947-145378997	SK-N-SH_RA	brain:	n/a
20	chr1:145384929-145384979	AG04450	lung:	fetal
21	chr1:145389393-145389443	NHDF-neo	bronchial:	n/a
22	chr1:145366524-145366574	Hela-S3	cervix:	n/a
23	chr1:145385299-145385349	HEK293	kidney:	embryo
24	chr1:145385391-145385441	NB4	blood:	n/a
25	chr1:145382963-145383013	HIPEpiC	eye:	n/a
26	chr1:145385299-145385349	GM12891	blood:	n/a
27	chr1:145375603-145375653	HEEpiC	esophagus:	n/a
28	chr1:145385677-145385727	Hela-S3	cervix:	n/a
29	chr1:145382616-145382666	SK-N-SH	brain:	n/a
30	chr1:145382616-145382666	HL-60	blood:	n/a
31	chr1:145385163-145385213	HRCEpiC	kidney:	n/a
32	chr1:145385771-145385821	CMK	blood:	n/a
33	chr1:145385524-145385574	HRPEpiC	eye:	n/a
34	chr1:145382477-145382527	HUVEC	blood vessel:	n/a
35	chr1:145366524-145366574	HEK293	kidney:	embryo
36	chr1:145301948-145301998	HepG2	liver:	n/a
37	chr1:145385677-145385727	HRCEpiC	kidney:	n/a
38	chr1:145366536-145366586	ProgFib	skin:	n/a
39	chr1:145301948-145301998	ProgFib	skin:	n/a
40	chr1:145382734-145382784	AG09319	gingival:	n/a
41	chr1:145378947-145378997	AG09309	skin:	n/a
42	chr1:145382477-145382527	HMEC	breast:	n/a
43	chr1:145385391-145385441	PrEC	prostate:	n/a
44	chr1:145384929-145384979	HCF	heart:	n/a
45	chr1:145301948-145301998	HCF	heart:	n/a
46	chr1:145382477-145382527	Hela-S3	cervix:	n/a
47	chr1:145385677-145385727	NH-A	brain:	n/a
48	chr1:145385524-145385574	HCT-116	colon:	n/a
49	chr1:145382963-145383013	AG04449	skin:	fetal
50	chr1:145382734-145382784	NHBE	bronchial:	n/a

(count:234 , 50 per page) page: 1 2 3 4 5

No.	Distal block	Cell Line	Cell type
1	chr1:145382508..145383529-chr17:62501275..62502754,3	Hela-S3	cervix:
2	chr1:145382320..145383837-chr1:148240011..148241574,2	K562	blood:
3	chr1:145382870..145383817-chr7:104653601..104654239,2	Hela-S3	cervix:
4	chr1:145382200..145383098-chr12:120638839..120639392,2	Hela-S3	cervix:
5	chr1:145381585..145384365-chr1:145541631..145545070,3	K562	blood:
6	chr1:145382364..145383144-chr20:60717597..60718855,3	Hela-S3	cervix:
7	chr1:145382719..145383404-chr19:34286528..34287234,2	Hela-S3	cervix:
8	chr1:145137959..145140660-chr1:145381811..145384748,2	K562	blood:
9	chr1:145382958..145383597-chr2:99225195..99225854,2	Hela-S3	cervix:
10	chr1:145381729..145384072-chr11:61557897..61559864,2	MCF-7	breast:
11	chr1:145394567..145396127-chr1:145438433..145441157,2	MCF-7	breast:
12	chr1:145382879..145383448-chr17:56736300..56736876,2	MCF-7	breast:
13	chr1:145381741..145382340-chr15:60689392..60689967,2	Hela-S3	cervix:
14	chr1:145381545..145384477-chr1:145476698..145479373,5	MCF-7	breast:
15	chr1:145394588..145401138-chr1:145435149..145439893,12	K562	blood:
16	chr1:144989394..144991643-chr1:145383439..145385394,2	K562	blood:
17	chr1:145382515..145383467-chr22:50969555..50970185,2	Hela-S3	cervix:
18	chr1:145382461..145383459-chr11:64073401..64073903,2	Hela-S3	cervix:
19	chr1:145381635..145384509-chr17:56768642..56771378,2	MCF-7	breast:
20	chr1:145381419..145383003-chr14:23451017..23452574,2	MCF-7	breast:
21	chr1:144993854..144995667-chr1:145381995..145384401,2	K562	blood:
22	chr1:145394722..145396609-chr1:145437837..145439599,3	MCF-7	breast:
23	chr1:145138455..145140955-chr1:145381729..145384293,2	MCF-7	breast:
24	chr1:144532552..144536277-chr1:145382371..145384278,4	K562	blood:
25	chr1:145139236..145140883-chr1:145385732..145388623,2	K562	blood:
26	chr1:145208214..145210170-chr1:145381446..145384467,3	MCF-7	breast:
27	chr1:145381393..145385302-chr1:145468144..145470495,5	K562	blood:
28	chr1:145382424..145382935-chr9:131314234..131315058,2	Hela-S3	cervix:
29	chr1:145382485..145383231-chr11:62520982..62521829,2	Hela-S3	cervix:
30	chr1:145381421..145384908-chr1:145408929..145417696,14	MCF-7	breast:
31	chr1:145382810..145383590-chr17:42643068..42644047,2	Hela-S3	cervix:
32	chr1:145382585..145383314-chr10:104154970..104155819,2	Hela-S3	cervix:
33	chr1:145382545..145383121-chr19:50432073..50432923,2	Hela-S3	cervix:
34	chr1:145382615..145383603-chr1:153935902..153936679,2	Hela-S3	cervix:
35	chr1:145382318..145383330-chr15:85524205..85525487,4	Hela-S3	cervix:
36	chr1:145381607..145383149-chr1:146549334..146552301,2	MCF-7	breast:
37	chr1:145382302..145383155-chr5:159826519..159827329,2	Hela-S3	cervix:
38	chr1:144930971..144932699-chr1:145382569..145384639,2	MCF-7	breast:
39	chr1:145382244..145383020-chr2:148777927..148778778,2	HCT-116	colon:
40	chr1:145382532..145383482-chr10:99078590..99079115,2	Hela-S3	cervix:
41	chr1:145394282..145396222-chr1:145454918..145457200,2	K562	blood:
42	chr1:145382267..145382936-chr6:134495932..134496686,2	Hela-S3	cervix:
43	chr1:145382934..145384561-chr1:145541431..145543797,2	MCF-7	breast:
44	chr1:109505593..109506549-chr1:145382556..145383354,2	Hela-S3	cervix:
45	chr1:145382296..145382909-chr22:43011234..43011744,2	HCT-116	colon:
46	chr1:145382524..145383037-chr7:35077396..35078000,2	Hela-S3	cervix:
47	chr1:145381291..145384278-chr15:56284107..56286728,2	MCF-7	breast:
48	chr1:145380635..145383784-chr1:145725921..145729985,3	MCF-7	breast:
49	chr1:145384844..145386862-chr1:145432023..145434289,2	MCF-7	breast:
50	chr1:145382909..145383542-chr3:5020677..5021614,3	Hela-S3	cervix:

(count:31 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-POLR3GL-1	chr1:145373054-145373507	NONHSAT005887
2	lnc-POLR3GL-1	chr1:145377017-145377311	ENSG00000233396
3	lnc-POLR3GL-1	chr1:145376544-145376692	ENSG00000233396.3
4	lnc-NOTCH2NL-2	chr1:145368441-145369446	NR_104217
5	lnc-POLR3GL-1	chr1:145373296-145373507	ENSG00000233396.3
6	lnc-NOTCH2NL-2	chr1:145319624-145319796	NR_104217
7	lnc-POLR3GL-1	chr1:145372088-145373798	NONHSAT005886
8	lnc-NOTCH2NL-2	chr1:145302649-145302868	NR_104217
9	lnc-NOTCH2NL-2	chr1:145305945-145305996	NR_104217
10	lnc-POLR3GL-1	chr1:145376544-145376705	NONHSAT005888
11	lnc-NOTCH2NL-2	chr1:145318054-145318226	NR_104217
12	lnc-NOTCH2NL-2	chr1:145311103-145311154	NR_104217
13	lnc-NOTCH2NL-2	chr1:145316512-145316684	NR_104217
14	lnc-NOTCH2NL-2	chr1:145369718-145370303	NR_104217
15	lnc-NOTCH2NL-2	chr1:145320511-145320619	NR_104217
16	lnc-NOTCH2NL-2	chr1:145309900-145310063	NR_104217
17	lnc-POLR3GL-1	chr1:145375583-145376447	NONHSAT005888
18	lnc-HFE2-1	chr1:145394428-145396136	NONHSAT005896
19	lnc-POLR3GL-1	chr1:145377701-145377772	ENSG00000233396
20	lnc-POLR3GL-1	chr1:145375343-145375672	NONHSAT005887
21	lnc-NOTCH2NL-2	chr1:145304447-145304652	NR_104217
22	lnc-POLR3GL-2	chr1:145375343-145375554	ENSG00000227280.1
23	lnc-POLR3GL-1	chr1:145377017-145377311	ENSG00000233396.3
24	lnc-POLR3GL-2	chr1:145373054-145373507	ENSG00000227280.1
25	lnc-POLR3GL-1	chr1:145377107-145377311	NONHSAT005894
26	lnc-NOTCH2NL-2	chr1:145317406-145317457	NR_104217
27	lnc-NOTCH2NL-2	chr1:145303910-145303982	NR_104217
28	lnc-POLR3GL-1	chr1:145376167-145376447	ENSG00000233396
29	lnc-NOTCH2NL-2	chr1:145301720-145301817	NR_104217
30	lnc-NOTCH2NL-2	chr1:145318936-145318987	NR_104217
31	lnc-POLR3GL-1	chr1:145377701-145377822	NONHSAT005894

No data

Variant related genes	Relation type
ENSG00000233396	TF binding region
RNVU1-6	TF binding region
NBPF10	TF binding region
ENSG00000233396	CpG island
RNVU1-6	CpG island
NBPF10	CpG island
ENSG00000108592	chromatin interactions
ENSG00000206652	chromatin interactions
ENSG00000182518	chromatin interactions
ENSG00000254837	chromatin interactions
ENSG00000173153	chromatin interactions
ENSG00000115947	chromatin interactions
ENSG00000228395	chromatin interactions
ENSG00000051108	chromatin interactions
ENSG00000181873	chromatin interactions
ENSG00000272762	chromatin interactions
ENSG00000143570	chromatin interactions
ENSG00000115875	chromatin interactions
ENSG00000159459	chromatin interactions
ENSG00000143384	chromatin interactions
ENSG00000141027	chromatin interactions
ENSG00000158019	chromatin interactions
ENSG00000061273	chromatin interactions
ENSG00000199879	chromatin interactions
ENSG00000136758	chromatin interactions
ENSG00000129474	chromatin interactions
ENSG00000118515	chromatin interactions
ENSG00000234222	chromatin interactions
ENSG00000125844	chromatin interactions
ENSG00000125246	chromatin interactions
ENSG00000169045	chromatin interactions
ENSG00000117289	chromatin interactions
ENSG00000145592	chromatin interactions
ENSG00000260288	chromatin interactions
ENSG00000146834	chromatin interactions
ENSG00000126749	chromatin interactions
ENSG00000140406	chromatin interactions
ENSG00000181039	chromatin interactions
ENSG00000272273	chromatin interactions
ENSG00000068097	chromatin interactions
ENSG00000110700	chromatin interactions
ENSG00000159363	chromatin interactions
ENSG00000205794	chromatin interactions
ENSG00000272189	chromatin interactions
ENSG00000202077	chromatin interactions
ENSG00000186141	chromatin interactions
ENSG00000158373	chromatin interactions
ENSG00000272933	chromatin interactions
ENSG00000137312	chromatin interactions
ENSG00000182718	chromatin interactions
ENSG00000203684	chromatin interactions
ENSG00000261441	chromatin interactions
ENSG00000120256	chromatin interactions
ENSG00000253508	chromatin interactions
ENSG00000156017	chromatin interactions
ENSG00000152022	chromatin interactions
ENSG00000204842	chromatin interactions
ENSG00000272393	chromatin interactions
ENSG00000131788	chromatin interactions
ENSG00000051341	chromatin interactions
ENSG00000196182	chromatin interactions
ENSG00000141385	chromatin interactions
ENSG00000272426	chromatin interactions
ENSG00000168291	chromatin interactions
ENSG00000186364	chromatin interactions
ENSG00000100413	chromatin interactions
ENSG00000027001	chromatin interactions
ENSG00000168894	chromatin interactions
ENSG00000041353	chromatin interactions
ENSG00000073417	chromatin interactions
ENSG00000257254	chromatin interactions
ENSG00000089693	chromatin interactions
ENSG00000163220	chromatin interactions
ENSG00000184402	chromatin interactions
ENSG00000069869	chromatin interactions
ENSG00000110031	chromatin interactions
ENSG00000245532	chromatin interactions
ENSG00000173852	chromatin interactions
ENSG00000202317	chromatin interactions
ENSG00000140740	chromatin interactions
ENSG00000078124	chromatin interactions
ENSG00000206737	chromatin interactions
ENSG00000153885	chromatin interactions
ENSG00000062716	chromatin interactions
ENSG00000267598	chromatin interactions
ENSG00000077150	chromatin interactions
ENSG00000198353	chromatin interactions
ENSG00000258099	chromatin interactions
ENSG00000267416	chromatin interactions
ENSG00000185670	chromatin interactions
ENSG00000258857	chromatin interactions
ENSG00000198900	chromatin interactions
ENSG00000258457	chromatin interactions
ENSG00000101144	chromatin interactions
ENSG00000213240	chromatin interactions
ENSG00000233396	chromatin interactions
ENSG00000259132	chromatin interactions
ENSG00000137818	chromatin interactions
ENSG00000255168	chromatin interactions
ENSG00000135847	chromatin interactions
ENSG00000199377	chromatin interactions
ENSG00000184825	chromatin interactions
ENSG00000062725	chromatin interactions
ENSG00000121101	chromatin interactions
ENSG00000268592	chromatin interactions
ENSG00000124120	chromatin interactions
ENSG00000197111	chromatin interactions
ENSG00000121851	chromatin interactions
ENSG00000188825	chromatin interactions
ENSG00000115446	chromatin interactions
ENSG00000065809	chromatin interactions
ENSG00000258890	chromatin interactions
ENSG00000101182	chromatin interactions
ENSG00000197451	chromatin interactions
ENSG00000185950	chromatin interactions
ENSG00000128829	chromatin interactions
ENSG00000132475	chromatin interactions
ENSG00000136932	chromatin interactions
ENSG00000234741	chromatin interactions
ENSG00000198952	chromatin interactions
ENSG00000135480	chromatin interactions
ENSG00000175354	chromatin interactions
ENSG00000184205	chromatin interactions
ENSG00000198366	chromatin interactions
ENSG00000183617	chromatin interactions
ENSG00000221886	chromatin interactions
ENSG00000268643	chromatin interactions
ENSG00000211451	chromatin interactions
ENSG00000131795	chromatin interactions
ENSG00000078487	chromatin interactions
ENSG00000135829	chromatin interactions
ENSG00000175115	chromatin interactions
ENSG00000178104	chromatin interactions
ENSG00000205861	chromatin interactions
ENSG00000263811	chromatin interactions
ENSG00000034152	chromatin interactions
ENSG00000200156	chromatin interactions
ENSG00000270022	chromatin interactions
ENSG00000177045	chromatin interactions
ENSG00000134905	chromatin interactions
ENSG00000213024	chromatin interactions
ENSG00000256312	chromatin interactions
ENSG00000169136	chromatin interactions
ENSG00000265565	chromatin interactions
ENSG00000113916	chromatin interactions
ENSG00000146063	chromatin interactions
ENSG00000104951	chromatin interactions
ENSG00000201699	chromatin interactions
ENSG00000203499	chromatin interactions
ENSG00000064102	chromatin interactions
ENSG00000076604	chromatin interactions
ENSG00000156599	chromatin interactions
ENSG00000243678	chromatin interactions
ENSG00000171940	chromatin interactions
ENSG00000253190	chromatin interactions
ENSG00000175536	chromatin interactions
ENSG00000185338	chromatin interactions
ENSG00000163472	chromatin interactions
ENSG00000197694	chromatin interactions
ENSG00000159445	chromatin interactions
ENSG00000153487	chromatin interactions
ENSG00000168509	chromatin interactions
ENSG00000257084	chromatin interactions
ENSG00000174827	chromatin interactions
ENSG00000160766	chromatin interactions
ENSG00000207349	chromatin interactions
ENSG00000089157	chromatin interactions
ENSG00000134825	chromatin interactions
ENSG00000140521	chromatin interactions
ENSG00000076685	chromatin interactions
ENSG00000261135	chromatin interactions
ENSG00000131779	chromatin interactions
ENSG00000165879	chromatin interactions
ENSG00000162641	chromatin interactions
ENSG00000155254	chromatin interactions
ENSG00000108654	chromatin interactions
ENSG00000248487	chromatin interactions
ENSG00000048828	chromatin interactions
ENSG00000207501	chromatin interactions
ENSG00000204406	chromatin interactions
ENSG00000188938	chromatin interactions
ENSG00000176386	chromatin interactions
ENSG00000171174	chromatin interactions
ENSG00000198483	chromatin interactions
ENSG00000100109	chromatin interactions
ENSG00000143549	chromatin interactions
ENSG00000185278	chromatin interactions
ENSG00000271546	chromatin interactions
ENSG00000266402	chromatin interactions
ENSG00000105722	chromatin interactions
ENSG00000233016	chromatin interactions
ENSG00000011052	chromatin interactions
ENSG00000223501	chromatin interactions
ENSG00000196176	chromatin interactions
ENSG00000121848	chromatin interactions
ENSG00000199753	chromatin interactions
ENSG00000255857	chromatin interactions
ENSG00000089902	chromatin interactions
ENSG00000134107	chromatin interactions
ENSG00000177989	chromatin interactions
ENSG00000108384	chromatin interactions
ENSG00000087191	chromatin interactions
ENSG00000161011	chromatin interactions
ENSG00000111790	chromatin interactions
ENSG00000201558	chromatin interactions
ENSG00000037474	chromatin interactions
ENSG00000120539	chromatin interactions
ENSG00000177144	chromatin interactions
ENSG00000121940	chromatin interactions
ENSG00000114779	chromatin interactions
ENSG00000201142	chromatin interactions
ENSG00000136875	chromatin interactions
ENSG00000100490	chromatin interactions
ENSG00000239672	chromatin interactions
ENSG00000231500	chromatin interactions
ENSG00000244619	chromatin interactions

Extended variants
information (count: 3309 )
Associated
traits (count: 170 )

Variant overlapped rSNPs/rCNVs (count:3309 , 50 per page) page: 1 2 3 4 5 6 7 ... 67

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs10910790	chr1:145294531-145294532	Weak transcription Strong transcription Genic enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs587654886	chr1:145294538-145294539	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs587703813	chr1:145294543-145294544	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs12564192	chr1:145294567-145294568	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs12564193	chr1:145294607-145294608	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs587610744	chr1:145294684-145294685	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs3969710	chr1:145294694-145294695	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs587659595	chr1:145294698-145294699	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs7367495	chr1:145294700-145294701	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs587724918	chr1:145294710-145294711	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs587619302	chr1:145294732-145294733	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs12035665	chr1:145294740-145294741	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs587701203	chr1:145294741-145294742	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs66828265	chr1:145294793-145294794	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs191318025	chr1:145294794-145294795	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs4068132	chr1:145294800-145294801	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs200668484	chr1:145294822-145294823	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs367603709	chr1:145294835-145294836	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs201984193	chr1:145294845-145294846	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs200126066	chr1:145294891-145294892	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs182636970	chr1:145294896-145294897	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs12026019	chr1:145294898-145294899	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs12026029	chr1:145294958-145294959	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs587758268	chr1:145294989-145294990	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs9424701	chr1:145295005-145295006	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
26	rs12026059	chr1:145295016-145295017	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs9424702	chr1:145295017-145295018	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
28	rs377133860	chr1:145295106-145295107	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs12026087	chr1:145295109-145295110	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs61814600	chr1:145295127-145295128	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs587734216	chr1:145295130-145295131	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs587615957	chr1:145295144-145295145	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs77996761	chr1:145295164-145295165	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs587689403	chr1:145295173-145295174	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs7366176	chr1:145295175-145295176	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs12031272	chr1:145295208-145295209	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs76075886	chr1:145295211-145295212	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs61814602	chr1:145295218-145295219	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs61814603	chr1:145295227-145295228	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs77024585	chr1:145295251-145295252	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs200550360	chr1:145295257-145295258	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs12026147	chr1:145295280-145295281	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs587630452	chr1:145295286-145295287	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs587699847	chr1:145295290-145295291	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs201177473	chr1:145295309-145295310	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs199803510	chr1:145295354-145295355	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs7364664	chr1:145295365-145295366	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs201725581	chr1:145295404-145295405	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs587764848	chr1:145295417-145295418	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs199605271	chr1:145295418-145295419	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:170)

Disease	PMID	Source
Breast cancer	17603634	CNVD
Esophageal squamous carcinoma	21637470	CNVD
HIV/AIDS	22032296	CNVD
Schizophrenia	19415332	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Autism	22495311	CNVD
Cancer	21129771	CNVD
Non-small cell lung cancer	21385341	CNVD
Autosomal dominant nocturnal frontal lobe epilepsy	18472482	CNVD
Hirschsprung''s Disease	21712996	CNVD
Non-small cell lung cancer	20864512	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Thrombocytopenia-absent radius syndrome	21933853	CNVD
Psychiatric disorder	22848183	CNVD
Ewing''s sarcoma	21437220	CNVD
Liposarcoma	21253554	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Hepatocellular carcinoma	16750200	CNVD
Burkitt''s lymphoma	18698080	CNVD
Melanoma	18172304	CNVD
Breast cancer	20409316	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Breast cancer	17393978	CNVD
Cervical cancer	21062161	CNVD
Glioblastoma multiforme	21080181	CNVD
Cancer	21183584	CNVD
Multiple myeloma	16461302	CNVD
Lung cancer	18438408	CNVD
Rett syndrome	21593744	CNVD
Intellectual disability	22102821	CNVD
Cancer	20164919	CNVD
Medulloblastoma	21979893	CNVD
Systemic lupus erythematosus	21956041	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
Wilms tumour	21544195	CNVD
Breast cancer	17133270	CNVD
small cell lung cancer	20016488	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Non-small cell lung cancer	21829676	CNVD
Carcinoma ex pleomorphic adenoma	18828159	CNVD
Non-small cell lung cancer	21044232	CNVD
Cervical cancer	21063398	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	20632083	CNVD
Endometrial cancer	22040021	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Medulloblastoma	21292688	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	21264507	CNVD
Multiple myeloma	21628407	CNVD
Cancer	16751803	CNVD
Prostate cancer	16705090	CNVD
Neuroblastoma	19435921	CNVD
Breast cancer	17850661	CNVD
Breast cancer	16461572	CNVD
Intracranial tumor	16823260	CNVD
Medulloblastoma	18056178	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Colorectal cancer	16272173	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Neuroblastoma	21899760	CNVD
Breast cancer	17899364	CNVD
Bladder cancer	19088036	CNVD
Ovarian neoplasms	16753589	CNVD
Glioblastoma multiforme	17002787	CNVD
Breast cancer	21858162	CNVD
Breast cancer	21611746	CNVD
Retinoblastoma	19183342	CNVD
Breast cancer	21990379	CNVD
Myelofibrosis	22110671	CNVD
Schizophrenia	22499536	CNVD
Schizophrenia	18923514	CNVD
Neuroblastoma	21124317	CNVD
Autism	20970697	CNVD
Bipolar disorder	19114987	CNVD
Epilepsy	20970697	CNVD
Schizophrenia	22118685	CNVD
Schizophrenia	20587603	CNVD
Schizophrenia	21285140	CNVD
Schizophrenia	20553308	CNVD
Schizophrenia	21956041	CNVD
Schizophrenia	20970697	CNVD
Addison''s disease	21851588	CNVD
Heart disease	22199024	CNVD
Mental retardation	19951919	CNVD
Ovarian cancer	20844748	CNVD
Schizophrenia	21399695	CNVD
Prostate cancer	17217626	CNVD
Congenital heart defect	22199024	CNVD
TAR Syndrome	17847015	CNVD
Thrombocytopenia-absent radius syndrome	17236129	CNVD
Autism	18784092	CNVD
Congenital abnormalities	18784092	CNVD
Mental retardation	18784092	CNVD
Schizophrenia	19855392	CNVD
Ovarian cancer	22174824	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Breast cancer	16608533	CNVD
Ewing''s sarcoma	22429812	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	19521722	CNVD
Mental retardation	19521722	CNVD
Schizophrenia	19521646	CNVD
Neuroblastoma	19536264	CNVD
Epilepsy	20923578	CNVD
Mental retardation	17124404	CNVD
Schizophrenia	19348701	CNVD
Schizophrenia	18668039	CNVD
Schizophrenia	19443537	CNVD
Schizophrenia	19571808	CNVD
Velocardiofacial syndrome	19329560	CNVD
Autism	19955444	CNVD
Autism	20964600	CNVD
Schizophrenia	19955444	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Gastrointestinal stromal cancer	19259404	CNVD
Colorectal cancer	20459617	CNVD
Osteosarcoma	19286668	CNVD
Osteosarcoma	17242211	CNVD
Ovarian cancer	17242211	CNVD
Ovine squamous-cell carcinoma	17599052	CNVD
Schizophrenia	18990708	CNVD
Sudden cardiac death	19188705	CNVD
Plasma-cell dyscrasia	16705089	CNVD
Myeloma	17024118	CNVD
Cancer	17060936	CNVD
Multiple myeloma	16616336	CNVD
Type 2 diabetes	19141583	CNVD
Chordoma	18071362	CNVD
Hepatocellular carcinoma	18803288	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	17001317	CNVD
Urothelial carcinoma	21177765	CNVD
Burkitt''s lymphoma	19759907	CNVD
Breast cancer	17142309	CNVD
Acute myeloid leukemia	21251322	CNVD
Multiple myeloma	17550852	CNVD
Prostate cancer	18632612	CNVD
Follicular lymphoma	18703704	CNVD
Lung adenocarcinoma	17982442	CNVD
Breast cancer	21509527	CNVD
Tetralogy of Fallot	22912587	CNVD
Bladder cancer	21909424	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
Acute myeloid leukemia	20729466	CNVD
Schizophrenia	19197363	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Schizophrenia	23813976	CNVD
Lung adenocarcinoma	21935476	CNVD
idiopathic generalized epilepsy	19843651	CNVD
Schizophrenia	19843651	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Autism	20531469	CNVD
Autism	20858243	CNVD
Autism	22543975	CNVD
Epilepsy	20502679	CNVD
Autism	20841430	CNVD
Developmental delay	20808231	CNVD
Obesity	20808231	CNVD
Autism	20808228	CNVD
Autism	22102821	CNVD
Congenital anomalies of the kidney and urinary tract	18316590	CNVD
Pancreatic cancer	17952125	CNVD

Chromatin state (count:1518 , 50 per page) page: 1 2 3 4 5 6 7 ... 31

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:145277600-145305400	Weak transcription	HepG2	liver
2	chr1:145277800-145296400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
3	chr1:145277800-145323400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
4	chr1:145281600-145296400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
5	chr1:145281800-145297800	Weak transcription	HUES6 Cell Line	embryonic stem cell
6	chr1:145281800-145298600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
7	chr1:145282000-145325400	Weak transcription	Fetal Brain Female	brain
8	chr1:145283000-145318600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
9	chr1:145283400-145298600	Weak transcription	A549	lung
10	chr1:145283800-145311200	Weak transcription	Stomach Mucosa	stomach
11	chr1:145286800-145304000	Weak transcription	K562	blood
12	chr1:145289600-145295000	Strong transcription	Monocytes-CD14+_RO01746	blood
13	chr1:145289600-145300200	Weak transcription	Fetal Brain Male	brain
14	chr1:145289800-145294800	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
15	chr1:145289800-145294800	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
16	chr1:145290000-145294600	Strong transcription	Stomach Smooth Muscle	stomach
17	chr1:145290000-145298800	Strong transcription	Primary monocytes fromperipheralblood	blood
18	chr1:145290200-145295000	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
19	chr1:145290400-145294800	Strong transcription	NHEK	skin
20	chr1:145290600-145296400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
21	chr1:145290800-145294800	Strong transcription	Cortex derived primary cultured neurospheres	brain
22	chr1:145290800-145294800	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
23	chr1:145290800-145296200	Weak transcription	Brain Hippocampus Middle	brain
24	chr1:145290800-145298200	Strong transcription	Osteobl	bone
25	chr1:145290800-145303800	Weak transcription	H9 Cell Line	embryonic stem cell
26	chr1:145290800-145313800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
27	chr1:145290800-145323400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
28	chr1:145290800-145328000	Weak transcription	Small Intestine	intestine
29	chr1:145291000-145294600	Strong transcription	HSMMtube	muscle
30	chr1:145291000-145294800	Strong transcription	Primary B cells from peripheral blood	blood
31	chr1:145291000-145295000	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
32	chr1:145291000-145296200	Weak transcription	Right Ventricle	heart
33	chr1:145291000-145296600	Weak transcription	Skeletal Muscle Male	skeletal muscle
34	chr1:145291000-145296600	Weak transcription	Hela-S3	cervix
35	chr1:145291000-145323400	Weak transcription	Brain Anterior Caudate	brain
36	chr1:145291000-145323600	Weak transcription	Brain Angular Gyrus	brain
37	chr1:145291000-145324000	Weak transcription	Brain Substantia Nigra	brain
38	chr1:145292200-145295800	Weak transcription	Spleen	Spleen
39	chr1:145292200-145296200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
40	chr1:145292200-145296200	Weak transcription	Pancreas	Pancrea
41	chr1:145292200-145296400	Weak transcription	Gastric	stomach
42	chr1:145292200-145296600	Weak transcription	Placenta Amnion	Placenta Amnion
43	chr1:145292200-145296600	Weak transcription	Psoas Muscle	Psoas
44	chr1:145292400-145296200	Weak transcription	Thymus	Thymus
45	chr1:145292600-145296200	Weak transcription	Colonic Mucosa	Colon
46	chr1:145292600-145296200	Weak transcription	Colon Smooth Muscle	Colon
47	chr1:145292600-145296200	Weak transcription	Fetal Lung	lung
48	chr1:145292600-145296600	Weak transcription	Rectal Smooth Muscle	rectum
49	chr1:145292600-145296600	Weak transcription	NHLF	lung
50	chr1:145292600-145298200	Weak transcription	NH-A	brain

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