Variant report

Variant nsv873210
Chromosome Location chr1:223707647-223856414
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:651 , 50 per page) page: 1 2 3 4 5 6 7 ... 14
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:223706200-223717800 Weak transcription Stomach Mucosa stomach
2 chr1:223708200-223709000 Enhancers Skeletal Muscle Male skeletal muscle
3 chr1:223708400-223708800 Enhancers Skeletal Muscle Female skeletal muscle
4 chr1:223708400-223709600 Bivalent Enhancer Fetal Muscle Leg muscle
5 chr1:223708400-223709800 Bivalent Enhancer Fetal Muscle Trunk muscle
6 chr1:223708600-223709200 Bivalent Enhancer Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
7 chr1:223709000-223709200 Flanking Active TSS Skeletal Muscle Male skeletal muscle
8 chr1:223710400-223718600 Weak transcription Sigmoid Colon Sigmoid Colon
9 chr1:223710800-223723400 Weak transcription Colonic Mucosa Colon
10 chr1:223711000-223718200 Weak transcription Gastric stomach
11 chr1:223712000-223713400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
12 chr1:223712200-223712400 Bivalent Enhancer Brain Dorsolateral Prefrontal Cortex brain
13 chr1:223712200-223712600 Enhancers Brain Hippocampus Middle brain
14 chr1:223712200-223712800 Bivalent Enhancer Fetal Muscle Trunk muscle
15 chr1:223712200-223712800 Bivalent Enhancer Fetal Muscle Leg muscle
16 chr1:223712200-223718400 Weak transcription Rectal Mucosa Donor 31 rectum
17 chr1:223712400-223712600 Enhancers Breast Myoepithelial Primary Cells Breast
18 chr1:223712400-223712600 Bivalent Enhancer Fetal Stomach stomach
19 chr1:223712400-223712600 ZNF genes & repeats Lung lung
20 chr1:223712600-223713400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
21 chr1:223712600-223714000 Weak transcription Lung lung
22 chr1:223713000-223713400 Bivalent Enhancer Fetal Muscle Trunk muscle
23 chr1:223713000-223716200 Weak transcription Breast Myoepithelial Primary Cells Breast
24 chr1:223713200-223713800 Enhancers Brain Substantia Nigra brain
25 chr1:223713400-223713600 Enhancers Brain Cingulate Gyrus brain
26 chr1:223714000-223714200 Bivalent Enhancer H1 Derived Mesenchymal Stem Cells ES cell derived
27 chr1:223714000-223714200 Bivalent Enhancer Fetal Muscle Trunk muscle
28 chr1:223714000-223714400 Enhancers Pancreas Pancrea
29 chr1:223714400-223728200 Weak transcription Fetal Stomach stomach
30 chr1:223715000-223716200 Weak transcription Rectal Mucosa Donor 29 rectum
31 chr1:223716000-223716400 Enhancers Duodenum Mucosa Duodenum
32 chr1:223716200-223716400 Enhancers Breast Myoepithelial Primary Cells Breast
33 chr1:223716400-223716600 Enhancers Small Intestine intestine
34 chr1:223716400-223717200 Enhancers Skeletal Muscle Male skeletal muscle
35 chr1:223716400-223717600 Weak transcription Breast Myoepithelial Primary Cells Breast
36 chr1:223717000-223717400 Enhancers Skeletal Muscle Female skeletal muscle
37 chr1:223717600-223718800 Enhancers Breast Myoepithelial Primary Cells Breast
38 chr1:223717800-223719400 Enhancers Stomach Mucosa stomach
39 chr1:223718200-223718600 Enhancers Gastric stomach
40 chr1:223718400-223719200 Enhancers Duodenum Mucosa Duodenum
41 chr1:223718400-223719200 Enhancers Rectal Mucosa Donor 31 rectum
42 chr1:223718600-223718800 Enhancers Sigmoid Colon Sigmoid Colon
43 chr1:223718600-223727000 Weak transcription Gastric stomach
44 chr1:223718800-223723400 Weak transcription Breast Myoepithelial Primary Cells Breast
45 chr1:223719200-223723400 Weak transcription Rectal Mucosa Donor 31 rectum
46 chr1:223719400-223719800 Weak transcription Stomach Mucosa stomach
47 chr1:223719800-223720400 Enhancers Stomach Mucosa stomach
48 chr1:223720400-223723400 Weak transcription Stomach Mucosa stomach
49 chr1:223721400-223721800 ZNF genes & repeats Esophagus oesophagus
50 chr1:223721800-223723600 Weak transcription Esophagus oesophagus

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