Variant report

Variant	nsv877518
Chromosome Location	chr3:135861666-135885554
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:309)
CpG islands
(count:245)
Chromatin interactive
region (count:36)
LncRNA
region (count:1)
Mature miRNA
region (count: 0)
miRNA target
sites (count:2)

(count:309 , 50 per page) page: 1 2 3 4 5 6 7

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF1	chr3:135861457-135861747	K562	blood:	n/a	n/a
2	BHLHE40	chr3:135873508-135873669	K562	blood:	n/a	n/a
3	BRCA1	chr3:135876601-135876657	Hela-S3	cervix:	n/a	n/a
4	CEBPB	chr3:135880290-135880682	Hela-S3	cervix:	n/a	chr3:135880457-135880468
5	CEBPB	chr3:135881242-135881519	Hela-S3	cervix:	n/a	chr3:135881372-135881383
6	CEBPB	chr3:135882275-135882480	A549	lung:	n/a	n/a
7	CEBPB	chr3:135882236-135882532	MCF-7	breast:	n/a	n/a
8	CEBPB	chr3:135881280-135881522	H1-hESC	embryonic stem cell:	n/a	chr3:135881372-135881383
9	CEBPB	chr3:135881317-135881526	K562	blood:	n/a	chr3:135881372-135881383
10	CEBPB	chr3:135865952-135866383	MCF-7	breast:	n/a	n/a
11	CEBPB	chr3:135877391-135877660	K562	blood:	n/a	n/a
12	CEBPB	chr3:135881200-135881525	MCF-7	breast:	n/a	chr3:135881372-135881383
13	CEBPB	chr3:135880295-135880646	IMR90	lung:	n/a	chr3:135880457-135880468
14	CEBPB	chr3:135866085-135866236	H1-hESC	embryonic stem cell:	n/a	n/a
15	CEBPB	chr3:135880305-135880652	HepG2	liver:	n/a	chr3:135880457-135880468
16	CEBPB	chr3:135880335-135880637	A549	lung:	n/a	chr3:135880457-135880468
17	CEBPB	chr3:135881343-135881507	A549	lung:	n/a	chr3:135881372-135881383
18	CEBPB	chr3:135880360-135880590	H1-hESC	embryonic stem cell:	n/a	chr3:135880457-135880468
19	CEBPB	chr3:135880289-135880673	K562	blood:	n/a	chr3:135880457-135880468
20	CEBPB	chr3:135881259-135881480	HepG2	liver:	n/a	chr3:135881372-135881383
21	CEBPB	chr3:135882223-135882541	Hela-S3	cervix:	n/a	n/a
22	CEBPB	chr3:135877464-135877680	HepG2	liver:	n/a	n/a
23	CTCF	chr3:135874270-135874306	GM10266	blood:	n/a	n/a
24	CTCF	chr3:135862180-135862330	GM06990	blood:	n/a	n/a
25	CTCF	chr3:135885087-135885146	GM20000	blood:	n/a	n/a
26	CTCF	chr3:135868160-135868310	MCF-7	breast:	n/a	n/a
27	E2F4	chr3:135861469-135861758	MCF10A-Er-Src	breast:	n/a	n/a
28	E2F4	chr3:135869504-135869749	MCF10A-Er-Src	breast:	n/a	n/a
29	E2F4	chr3:135877680-135877834	MCF10A-Er-Src	breast:	n/a	n/a
30	E2F4	chr3:135863834-135864034	MCF10A-Er-Src	breast:	n/a	n/a
31	EP300	chr3:135861185-135862049	SK-N-SH	brain:	n/a	chr3:135861297-135861306
32	EP300	chr3:135861388-135861840	A549	lung:	n/a	n/a
33	ESR1	chr3:135866202-135866691	ECC-1	luminal epithelium:	n/a	n/a
34	ESR1	chr3:135866370-135866631	T-47D	breast:	n/a	n/a
35	ESR1	chr3:135866255-135866612	ECC-1	luminal epithelium:	n/a	n/a
36	ESR1	chr3:135884955-135885168	ECC-1	luminal epithelium:	n/a	n/a
37	FOS	chr3:135871329-135871597	MCF10A-Er-Src	breast:	n/a	n/a
38	FOS	chr3:135868645-135869030	MCF10A-Er-Src	breast:	n/a	chr3:135868834-135868845
39	FOS	chr3:135865789-135866092	MCF10A-Er-Src	breast:	n/a	chr3:135865938-135865949
40	FOS	chr3:135861345-135861874	MCF10A-Er-Src	breast:	n/a	chr3:135861608-135861619
41	FOS	chr3:135868656-135869020	MCF10A-Er-Src	breast:	n/a	chr3:135868834-135868845
42	FOS	chr3:135868624-135868957	MCF10A-Er-Src	breast:	n/a	chr3:135868834-135868845
43	FOS	chr3:135861416-135861801	Hela-S3	cervix:	n/a	chr3:135861608-135861619
44	FOS	chr3:135861352-135861872	MCF10A-Er-Src	breast:	n/a	chr3:135861608-135861619
45	FOS	chr3:135868536-135869065	HUVEC	blood vessel:	n/a	chr3:135868834-135868845
46	FOS	chr3:135860692-135861958	HUVEC	blood vessel:	n/a	chr3:135861608-135861619
47	FOS	chr3:135865772-135866096	MCF10A-Er-Src	breast:	n/a	chr3:135865938-135865949
48	FOS	chr3:135865790-135866050	MCF10A-Er-Src	breast:	n/a	chr3:135865938-135865949
49	FOS	chr3:135865762-135866087	MCF10A-Er-Src	breast:	n/a	chr3:135865938-135865949
50	FOS	chr3:135871387-135871638	MCF10A-Er-Src	breast:	n/a	n/a

(count:245 , 50 per page) page: 1 2 3 4 5

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr3:135870058-135870108	PANC-1	pancreas:	n/a
2	chr3:135870058-135870108	PANC-1	pancreas:	n/a
3	chr3:135869103-135869153	H1-hESC	embryonic stem cell:	embryo
4	chr3:135870596-135870646	HepG2	liver:	n/a
5	chr3:135864939-135864989	HCF	heart:	n/a
6	chr3:135864939-135864989	PrEC	prostate:	n/a
7	chr3:135864939-135864989	AG04449	skin:	fetal
8	chr3:135864939-135864989	HIPEpiC	eye:	n/a
9	chr3:135864939-135864989	HRE	kidney:	n/a
10	chr3:135870058-135870108	LNCaP	prostate:	n/a
11	chr3:135870058-135870108	HRE	kidney:	n/a
12	chr3:135870596-135870646	PANC-1	pancreas:	n/a
13	chr3:135870058-135870108	HL-60	blood:	n/a
14	chr3:135870058-135870108	AG04450	lung:	fetal
15	chr3:135870058-135870108	NHDF-neo	bronchial:	n/a
16	chr3:135870058-135870108	PFSK-1	brain:	n/a
17	chr3:135870058-135870108	PrEC	prostate:	n/a
18	chr3:135864939-135864989	K562	blood:	n/a
19	chr3:135864939-135864989	NHDF-neo	bronchial:	n/a
20	chr3:135870058-135870108	ECC-1	luminal epithelium:	n/a
21	chr3:135869103-135869153	BJ	skin:	n/a
22	chr3:135864939-135864989	SAEC	small airway:	n/a
23	chr3:135870058-135870108	AG04449	skin:	fetal
24	chr3:135870058-135870108	K562	blood:	n/a
25	chr3:135870596-135870646	HCF	heart:	n/a
26	chr3:135864939-135864989	HRPEpiC	eye:	n/a
27	chr3:135870596-135870646	AG09319	gingival:	n/a
28	chr3:135869103-135869153	Jurkat	blood:	n/a
29	chr3:135869103-135869153	K562	blood:	n/a
30	chr3:135864939-135864989	AG04450	lung:	fetal
31	chr3:135869103-135869153	MCF10A-Er-Src	breast:	n/a
32	chr3:135869103-135869153	SKMC	muscle:	n/a
33	chr3:135869103-135869153	PANC-1	pancreas:	n/a
34	chr3:135870596-135870646	BE2_C	brain:	n/a
35	chr3:135864939-135864989	HPAEpiC	pulmonary alveolar:	n/a
36	chr3:135864939-135864989	Caco-2	colon:	n/a
37	chr3:135870596-135870646	AG10803	skin:	n/a
38	chr3:135870058-135870108	BJ	skin:	n/a
39	chr3:135864939-135864989	RPTEC	kidney:	n/a
40	chr3:135870058-135870108	HCT-116	colon:	n/a
41	chr3:135870596-135870646	CMK	blood:	n/a
42	chr3:135869103-135869153	NB4	blood:	n/a
43	chr3:135870058-135870108	HEEpiC	esophagus:	n/a
44	chr3:135870596-135870646	Caco-2	colon:	n/a
45	chr3:135869103-135869153	AG09309	skin:	n/a
46	chr3:135869103-135869153	AG09319	gingival:	n/a
47	chr3:135864939-135864989	HMEC	breast:	n/a
48	chr3:135870058-135870108	ovcar-3	ovarian:	n/a
49	chr3:135870058-135870108	MCF10A-Er-Src	breast:	n/a
50	chr3:135864939-135864989	T-47D	breast:	n/a

(count:36 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr3:135866754..135872495-chr3:135912205..135917619,11	MCF-7	breast:
2	chr3:135861871..135867047-chr3:135867816..135873226,7	K562	blood:
3	chr3:135861871..135864342-chr3:135869780..135872731,2	K562	blood:
4	chr3:135861871..135864342-chr3:135869780..135872731,2	K562	blood:
5	chr3:135884038..135885594-chr3:135912255..135915096,2	MCF-7	breast:
6	chr3:135881427..135883402-chr3:135892260..135894929,2	MCF-7	breast:
7	chr3:135860397..135862816-chr3:135864365..135866011,2	MCF-7	breast:
8	chr3:135874998..135877491-chr3:135913896..135916002,2	MCF-7	breast:
9	chr3:135861871..135867047-chr3:135867816..135873226,7	K562	blood:
10	chr3:135876607..135878545-chr3:135883402..135885999,2	K562	blood:
11	chr3:135868191..135870649-chr3:135873014..135875419,2	K562	blood:
12	chr3:135871355..135873070-chr3:135914710..135916565,2	K562	blood:
13	chr3:135871018..135872662-chr3:135874899..135876560,2	MCF-7	breast:
14	chr3:135858417..135861749-chr3:135914176..135916591,4	MCF-7	breast:
15	chr3:135867388..135869019-chr3:135870114..135872076,2	K562	blood:
16	chr3:135883996..135885511-chr3:135967463..135969334,2	MCF-7	breast:
17	chr3:135863083..135865842-chr3:135914024..135917115,3	MCF-7	breast:
18	chr3:135865547..135867656-chr3:135871463..135873226,2	K562	blood:
19	chr3:135865547..135867656-chr3:135871463..135873226,2	K562	blood:
20	chr3:135868668..135870435-chr3:135888609..135890822,2	MCF-7	breast:
21	chr3:135860291..135862678-chr3:135891863..135894559,2	MCF-7	breast:
22	chr3:135866344..135868240-chr3:135873680..135876570,2	K562	blood:
23	chr3:135870333..135872175-chr3:135909037..135911378,2	MCF-7	breast:
24	chr3:135870250..135872855-chr3:135914710..135917326,2	K562	blood:
25	chr3:135884006..135886547-chr3:135914260..135916079,2	K562	blood:
26	chr3:135874306..135876384-chr3:135885061..135886909,2	MCF-7	breast:
27	chr3:135879587..135883583-chr3:135913683..135917123,7	MCF-7	breast:
28	chr3:135876657..135878200-chr3:135910756..135912522,2	K562	blood:
29	chr3:135871018..135872662-chr3:135874899..135876560,2	MCF-7	breast:
30	chr3:135883267..135885538-chr3:135968468..135971038,3	K562	blood:
31	chr3:135881085..135883253-chr3:135914338..135916372,2	MCF-7	breast:
32	chr3:135873199..135876113-chr3:135913654..135915671,2	K562	blood:
33	chr3:135883267..135884888-chr3:135968468..135971038,2	K562	blood:
34	chr3:135867388..135869019-chr3:135870114..135872076,2	K562	blood:
35	chr3:135860397..135862816-chr3:135864365..135866011,2	MCF-7	breast:
36	chr3:135876607..135878545-chr3:135883402..135885999,2	K562	blood:

(count:1 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-PPP2R3A-1	chr3:135874391-135874838	NONHSAT092274

No data

(count:2 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location	mirBase accession
1	MSL2	hsa-miR-30a-5p	chr3:135869395-135869416
2	MSL2	hsa-miR-30d-5p	chr3:135869395-135869416

Variant related genes	Relation type
TDGF1P6	TF binding region
TDGF1P6	CpG island
ENSG00000174579	chromatin interactions
ENSG00000114054	chromatin interactions
ENSG00000241438	chromatin interactions

Extended variants
information (count: 1040 )
Associated
traits (count: 53 )

Variant overlapped rSNPs/rCNVs (count:1040 , 50 per page) page: 1 2 3 4 5 6 7 ... 21

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs9881400	chr3:135861666-135861667	Bivalent Enhancer Enhancers Weak transcription Strong transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs555440105	chr3:135861692-135861693	Bivalent Enhancer Enhancers Weak transcription Strong transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
3	rs375924171	chr3:135861696-135861697	Bivalent Enhancer Enhancers Weak transcription Strong transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
4	rs557014142	chr3:135861699-135861700	Bivalent Enhancer Enhancers Weak transcription Strong transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
5	rs370035579	chr3:135861730-135861731	Bivalent Enhancer Enhancers Weak transcription Strong transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
6	rs568345693	chr3:135861750-135861751	Bivalent Enhancer Enhancers Weak transcription Strong transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
7	rs78248315	chr3:135861751-135861752	Bivalent Enhancer Enhancers Weak transcription Strong transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
8	rs572279825	chr3:135861817-135861818	Enhancers Weak transcription Strong transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
9	rs188844458	chr3:135861851-135861852	Enhancers Weak transcription Strong transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
10	rs539120852	chr3:135861872-135861873	Enhancers Weak transcription Strong transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
11	rs138158437	chr3:135861877-135861878	Enhancers Weak transcription Strong transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
12	rs562840283	chr3:135861888-135861889	Enhancers Weak transcription Strong transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
13	rs572551859	chr3:135861942-135861943	Enhancers Weak transcription Strong transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
14	rs143517444	chr3:135861964-135861965	Enhancers Weak transcription Strong transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
15	rs147173443	chr3:135861969-135861970	Enhancers Weak transcription Strong transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
16	rs541203362	chr3:135861972-135861973	Enhancers Weak transcription Strong transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
17	rs575501236	chr3:135861984-135861985	Enhancers Weak transcription Strong transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
18	rs193290330	chr3:135862021-135862022	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs148603886	chr3:135862129-135862130	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs571485709	chr3:135862152-135862153	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs540937978	chr3:135862163-135862164	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs141157687	chr3:135862168-135862169	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs546822685	chr3:135862197-135862198	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs116729096	chr3:135862206-135862207	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs527547875	chr3:135862299-135862300	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs150681650	chr3:135862322-135862323	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs562902482	chr3:135862355-135862356	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs139990584	chr3:135862357-135862358	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs543017453	chr3:135862461-135862462	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs530777788	chr3:135862484-135862485	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs550760019	chr3:135862496-135862497	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs530425604	chr3:135862501-135862502	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs547723506	chr3:135862536-135862537	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs539617135	chr3:135862539-135862540	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs6765530	chr3:135862546-135862547	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs566216349	chr3:135862564-135862565	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs184631981	chr3:135862568-135862569	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs563041093	chr3:135862612-135862613	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs554917637	chr3:135862620-135862621	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs187531801	chr3:135862623-135862624	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs560108357	chr3:135862643-135862644	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs113799200	chr3:135862651-135862652	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs532115427	chr3:135862690-135862691	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs146844070	chr3:135862707-135862708	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs192057983	chr3:135862761-135862762	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs567222802	chr3:135862780-135862781	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs75216765	chr3:135862845-135862846	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs184026368	chr3:135862878-135862879	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs189671398	chr3:135862889-135862890	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs529377067	chr3:135862890-135862891	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:53)

Disease	PMID	Source
Basal cell lymphoma	17053054	CNVD
Esophageal cancer	21851588	CNVD
Uveal melanoma	21693616	CNVD
Glioblastoma multiforme	21080181	CNVD
Retinoblastoma	21504564	CNVD
Medulloblastoma	21979893	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Lung cancer	18438408	CNVD
Cancer	21129771	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Cervical cancer	21062161	CNVD
Squamous cell cancer	20885788	CNVD
Melanoma	18172304	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Bipolar disorder	18458673	CNVD
Breast cancer	22032731	CNVD
Breast cancer	16461572	CNVD
Neuroblastoma	17533364	CNVD
Cervical Cancer	21857958	CNVD
Melanoma	21693616	CNVD
Lung cancer	21426551	CNVD
Cancer	21637783	CNVD
Cervical cancer	21063398	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Liposarcoma	21253554	CNVD
Oral cancer	21386901	CNVD
Renal cell carcinoma	19461508	CNVD
Cancer	22065749	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
microdeletion syndrome	22180640	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Multiple myeloma	17550852	CNVD
Basal cell lymphoma	21115979	CNVD
Ovarian cancer	22174824	CNVD
Colorectal cancer	18645599	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Hepatocellular carcinoma	16750200	CNVD
Intracranial aneurysm	16715129	CNVD
Lung cancer	16740712	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Myelodysplastic syndrome	21251322	CNVD
Blepharophimosis-ptosis-epicanthus inversus syndrome	22067867	CNVD
small cell lung cancer	20016488	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Developmental delay	21147756	CNVD
Myelofibrosis	22110671	CNVD
Schizophrenia	18511947	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD

Chromatin state (count:1013 , 50 per page) page: 1 2 3 4 5 6 7 ... 21

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:135822800-135870000	Weak transcription	Rectal Mucosa Donor 31	rectum
2	chr3:135823200-135868400	Weak transcription	Rectal Mucosa Donor 29	rectum
3	chr3:135831400-135869400	Weak transcription	Psoas Muscle	Psoas
4	chr3:135831400-135874800	Weak transcription	Fetal Brain Male	brain
5	chr3:135843400-135866400	Weak transcription	Brain Inferior Temporal Lobe	brain
6	chr3:135843800-135873800	Weak transcription	Colonic Mucosa	Colon
7	chr3:135845600-135863000	Weak transcription	Fetal Muscle Trunk	muscle
8	chr3:135845600-135864000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
9	chr3:135845600-135869600	Weak transcription	Fetal Lung	lung
10	chr3:135845600-135880400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
11	chr3:135845800-135861800	Weak transcription	Fetal Stomach	stomach
12	chr3:135845800-135864000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
13	chr3:135845800-135866000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
14	chr3:135846200-135863600	Weak transcription	Brain Germinal Matrix	brain
15	chr3:135846200-135864200	Weak transcription	Skeletal Muscle Male	skeletal muscle
16	chr3:135850800-135866000	Weak transcription	Brain Hippocampus Middle	brain
17	chr3:135852400-135868000	Weak transcription	Fetal Brain Female	brain
18	chr3:135854200-135863600	Weak transcription	Fetal Intestine Large	intestine
19	chr3:135854200-135870000	Weak transcription	Spleen	Spleen
20	chr3:135854600-135863600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
21	chr3:135854600-135868400	Weak transcription	Thymus	Thymus
22	chr3:135854600-135870000	Weak transcription	Fetal Intestine Small	intestine
23	chr3:135855800-135865200	Weak transcription	Fetal Thymus	thymus
24	chr3:135855800-135866000	Weak transcription	Brain Cingulate Gyrus	brain
25	chr3:135855800-135868000	Weak transcription	K562	blood
26	chr3:135855800-135870800	Weak transcription	Fetal Kidney	kidney
27	chr3:135856400-135866000	Weak transcription	Lung	lung
28	chr3:135857400-135863600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
29	chr3:135857400-135866600	Weak transcription	Primary hematopoietic stem cells	blood
30	chr3:135857600-135862600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
31	chr3:135858000-135866200	Weak transcription	Monocytes-CD14+_RO01746	blood
32	chr3:135858200-135864400	Weak transcription	Dnd41	blood
33	chr3:135858200-135869200	Weak transcription	Primary neutrophils fromperipheralblood	blood
34	chr3:135858400-135864000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
35	chr3:135859200-135868000	Weak transcription	Primary B cells from cord blood	blood
36	chr3:135859600-135862200	Enhancers	Breast Myoepithelial Primary Cells	Breast
37	chr3:135859600-135863200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
38	chr3:135859600-135863200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
39	chr3:135859600-135864000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
40	chr3:135859800-135862000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
41	chr3:135859800-135862000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
42	chr3:135859800-135862000	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
43	chr3:135859800-135862200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
44	chr3:135859800-135862400	Enhancers	HSMM	muscle
45	chr3:135859800-135862600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
46	chr3:135860000-135862000	Enhancers	Fetal Heart	heart
47	chr3:135860000-135862000	Enhancers	NHLF	lung
48	chr3:135860000-135862200	Enhancers	NH-A	brain
49	chr3:135860000-135862200	Enhancers	Osteobl	bone
50	chr3:135860200-135861800	Enhancers	Gastric	stomach

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links