Variant report

Variant nsv882526
Chromosome Location chr5:103390664-103478518
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:62 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:103395600-103397000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
2 chr5:103396800-103397200 ZNF genes & repeats HUES48 Cell Line embryonic stem cell
3 chr5:103397200-103402000 Weak transcription HUES48 Cell Line embryonic stem cell
4 chr5:103397800-103398400 Enhancers iPS-15b Cell Line embryonic stem cell
5 chr5:103398400-103398600 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
6 chr5:103398400-103398800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr5:103398400-103398800 Active TSS Rectal Mucosa Donor 29 rectum
8 chr5:103398400-103404000 Weak transcription iPS-15b Cell Line embryonic stem cell
9 chr5:103398600-103398800 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr5:103398600-103399000 ZNF genes & repeats ES-I3 Cell Line embryonic stem cell
11 chr5:103398600-103399000 Enhancers iPS-20b Cell Line embryonic stem cell
12 chr5:103398600-103399000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
13 chr5:103398600-103399000 Enhancers Rectal Mucosa Donor 31 rectum
14 chr5:103398600-103399000 Enhancers Osteobl bone
15 chr5:103398600-103399200 Enhancers HUES64 Cell Line embryonic stem cell
16 chr5:103399000-103400800 Weak transcription ES-I3 Cell Line embryonic stem cell
17 chr5:103400000-103400400 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
18 chr5:103400400-103400600 Weak transcription HUES6 Cell Line embryonic stem cell
19 chr5:103400600-103402800 Strong transcription HUES6 Cell Line embryonic stem cell
20 chr5:103400800-103401000 Strong transcription ES-I3 Cell Line embryonic stem cell
21 chr5:103401000-103401200 ZNF genes & repeats ES-I3 Cell Line embryonic stem cell
22 chr5:103401200-103407000 Weak transcription ES-I3 Cell Line embryonic stem cell
23 chr5:103402000-103404200 Strong transcription HUES48 Cell Line embryonic stem cell
24 chr5:103402800-103403800 Weak transcription HUES6 Cell Line embryonic stem cell
25 chr5:103403800-103405400 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
26 chr5:103404000-103404400 Active TSS iPS-15b Cell Line embryonic stem cell
27 chr5:103404200-103406000 Weak transcription HUES48 Cell Line embryonic stem cell
28 chr5:103407200-103407400 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
29 chr5:103415600-103416800 Active TSS ES-I3 Cell Line embryonic stem cell
30 chr5:103416000-103417600 Active TSS K562 blood
31 chr5:103416200-103416800 Active TSS A549 lung
32 chr5:103416200-103417000 Active TSS HepG2 liver
33 chr5:103416400-103416800 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr5:103416800-103419200 Weak transcription ES-I3 Cell Line embryonic stem cell
35 chr5:103417600-103417800 Transcr. at gene 5' and 3' K562 blood
36 chr5:103417800-103418000 Active TSS K562 blood
37 chr5:103418000-103423400 Weak transcription K562 blood
38 chr5:103418800-103419000 Enhancers HUES6 Cell Line embryonic stem cell
39 chr5:103419200-103419600 Enhancers ES-I3 Cell Line embryonic stem cell
40 chr5:103419200-103420800 Enhancers iPS-15b Cell Line embryonic stem cell
41 chr5:103419600-103425000 Weak transcription ES-I3 Cell Line embryonic stem cell
42 chr5:103420200-103422800 Enhancers Pancreatic Islets Pancreatic Islet
43 chr5:103422800-103424800 Weak transcription Pancreatic Islets Pancreatic Islet
44 chr5:103423400-103424800 Enhancers K562 blood
45 chr5:103424800-103425200 Flanking Active TSS K562 blood
46 chr5:103425000-103425200 Enhancers Pancreatic Islets Pancreatic Islet
47 chr5:103425000-103425200 Enhancers NH-A brain
48 chr5:103425000-103425400 Enhancers Cortex derived primary cultured neurospheres brain
49 chr5:103425000-103425800 Enhancers ES-I3 Cell Line embryonic stem cell
50 chr5:103425200-103425400 Active TSS K562 blood

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