Variant report

Variant	nsv883975
Chromosome Location	chr6:29917503-29937833
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1065)
CpG islands
(count:1712)
Chromatin interactive
region (count:32)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1065 , 50 per page) page: 1 2 3 4 5 6 7 ... 22

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr6:29937042-29937091	K562	blood:	n/a	n/a
2	ARID3A	chr6:29933748-29934309	K562	blood:	n/a	n/a
3	ARID3A	chr6:29922852-29922901	K562	blood:	n/a	n/a
4	ARID3A	chr6:29933775-29934240	HepG2	liver:	n/a	n/a
5	ARID3A	chr6:29935252-29935904	K562	blood:	n/a	n/a
6	ARID3A	chr6:29931139-29931164	K562	blood:	n/a	n/a
7	ARID3A	chr6:29932477-29933236	K562	blood:	n/a	n/a
8	ARID3A	chr6:29935249-29935871	HepG2	liver:	n/a	n/a
9	ARID3A	chr6:29934522-29934914	K562	blood:	n/a	n/a
10	ARID3A	chr6:29932290-29932954	HepG2	liver:	n/a	n/a
11	ATF1	chr6:29932584-29933076	K562	blood:	n/a	n/a
12	ATF1	chr6:29935286-29935585	K562	blood:	n/a	n/a
13	ATF2	chr6:29932488-29932978	GM12878	blood:	n/a	n/a
14	ATF2	chr6:29932433-29933091	GM12878	blood:	n/a	n/a
15	ATF3	chr6:29932539-29933023	K562	blood:	n/a	n/a
16	ATF3	chr6:29932615-29932943	K562	blood:	n/a	n/a
17	BACH1	chr6:29932453-29933278	H1-hESC	embryonic stem cell:	n/a	n/a
18	BACH1	chr6:29932608-29933062	K562	blood:	n/a	n/a
19	BATF	chr6:29932589-29933017	GM12878	blood:	n/a	chr6:29932797-29932808 chr6:29932798-29932808
20	BATF	chr6:29932612-29932987	GM12878	blood:	n/a	chr6:29932797-29932808 chr6:29932798-29932808
21	BCL11A	chr6:29932602-29932969	GM12878	blood:	n/a	chr6:29932797-29932806
22	BCL11A	chr6:29932639-29932881	GM12878	blood:	n/a	chr6:29932797-29932806
23	BCL3	chr6:29932533-29932943	GM12878	blood:	n/a	chr6:29932797-29932806
24	BCLAF1	chr6:29932428-29933119	GM12878	blood:	n/a	chr6:29932797-29932806
25	BCLAF1	chr6:29932494-29933203	GM12878	blood:	n/a	chr6:29932797-29932806
26	BHLHE40	chr6:29933866-29934118	GM12878	blood:	n/a	n/a
27	BHLHE40	chr6:29920783-29921023	A549	lung:	n/a	n/a
28	BHLHE40	chr6:29932569-29933159	K562	blood:	n/a	n/a
29	BHLHE40	chr6:29934607-29934610	GM12878	blood:	n/a	n/a
30	BHLHE40	chr6:29933714-29934091	HepG2	liver:	n/a	n/a
31	BHLHE40	chr6:29932548-29933279	GM12878	blood:	n/a	n/a
32	BHLHE40	chr6:29920974-29921274	K562	blood:	n/a	n/a
33	BHLHE40	chr6:29935166-29935758	K562	blood:	n/a	n/a
34	BHLHE40	chr6:29933686-29934301	K562	blood:	n/a	n/a
35	CBX3	chr6:29935905-29936437	HCT-116	colon:	n/a	n/a
36	CBX3	chr6:29933685-29934511	HCT-116	colon:	n/a	n/a
37	CBX3	chr6:29932504-29933475	K562	blood:	n/a	n/a
38	CBX3	chr6:29935109-29935665	K562	blood:	n/a	n/a
39	CBX3	chr6:29935860-29936460	HCT-116	colon:	n/a	n/a
40	CBX3	chr6:29932608-29932997	K562	blood:	n/a	n/a
41	CBX3	chr6:29932403-29933273	HCT-116	colon:	n/a	n/a
42	CBX3	chr6:29920575-29921454	HCT-116	colon:	n/a	n/a
43	CCNT2	chr6:29935317-29935569	K562	blood:	n/a	n/a
44	CCNT2	chr6:29932623-29932970	K562	blood:	n/a	n/a
45	CEBPB	chr6:29932451-29933116	GM12878	blood:	n/a	n/a
46	CEBPB	chr6:29932426-29933189	K562	blood:	n/a	n/a
47	CEBPB	chr6:29936002-29936359	Hela-S3	cervix:	n/a	n/a
48	CEBPB	chr6:29934230-29934543	IMR90	lung:	n/a	n/a
49	CEBPB	chr6:29935064-29935418	HepG2	liver:	n/a	chr6:29935249-29935260 chr6:29935210-29935221
50	CEBPB	chr6:29919167-29919420	K562	blood:	n/a	n/a

(count:1712 , 50 per page) page: 1 2 3 4 5 6 7 ... 35

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:29924407-29924457	GM12878	blood:	n/a
2	chr6:29922522-29922572	K562	blood:	n/a
3	chr6:29923954-29924004	GM12878	blood:	n/a
4	chr6:29924475-29924525	AoSMC	blood vessel:	n/a
5	chr6:29924407-29924457	GM12878	blood:	n/a
6	chr6:29922522-29922572	K562	blood:	n/a
7	chr6:29923954-29924004	GM12878	blood:	n/a
8	chr6:29924475-29924525	AoSMC	blood vessel:	n/a
9	chr6:29924404-29924454	Caco-2	colon:	n/a
10	chr6:29924310-29924360	U87	brain:	n/a
11	chr6:29924247-29924297	BE2_C	brain:	n/a
12	chr6:29920309-29920359	NHBE	bronchial:	n/a
13	chr6:29924202-29924252	SAEC	small airway:	n/a
14	chr6:29923695-29923745	H1-hESC	embryonic stem cell:	embryo
15	chr6:29924475-29924525	NT2-D1	testis:	n/a
16	chr6:29933511-29933561	HepG2	liver:	n/a
17	chr6:29933971-29934021	K562	blood:	n/a
18	chr6:29932621-29932671	HRPEpiC	eye:	n/a
19	chr6:29924475-29924525	HMEC	breast:	n/a
20	chr6:29921779-29921829	SK-N-SH	brain:	n/a
21	chr6:29933411-29933461	ProgFib	skin:	n/a
22	chr6:29923913-29923963	NT2-D1	testis:	n/a
23	chr6:29924475-29924525	T-47D	breast:	n/a
24	chr6:29933971-29934021	HPAEpiC	pulmonary alveolar:	n/a
25	chr6:29923913-29923963	GM12891	blood:	n/a
26	chr6:29922522-29922572	SK-N-SH_RA	brain:	n/a
27	chr6:29933915-29933965	Jurkat	blood:	n/a
28	chr6:29920309-29920359	ProgFib	skin:	n/a
29	chr6:29924247-29924297	AG10803	skin:	n/a
30	chr6:29933915-29933965	PFSK-1	brain:	n/a
31	chr6:29924247-29924297	GM19239	blood:	n/a
32	chr6:29933697-29933747	A549	lung:	n/a
33	chr6:29933925-29933975	BE2_C	brain:	n/a
34	chr6:29923695-29923745	LNCaP	prostate:	n/a
35	chr6:29924404-29924454	HCM	heart:	n/a
36	chr6:29924404-29924454	BE2_C	brain:	n/a
37	chr6:29932743-29932793	NB4	blood:	n/a
38	chr6:29932621-29932671	BJ	skin:	n/a
39	chr6:29923954-29924004	AoSMC	blood vessel:	n/a
40	chr6:29924202-29924252	NT2-D1	testis:	n/a
41	chr6:29921779-29921829	SK-N-SH_RA	brain:	n/a
42	chr6:29923913-29923963	BE2_C	brain:	n/a
43	chr6:29923695-29923745	AG09319	gingival:	n/a
44	chr6:29920309-29920359	NB4	blood:	n/a
45	chr6:29923954-29924004	HL-60	blood:	n/a
46	chr6:29933411-29933461	LNCaP	prostate:	n/a
47	chr6:29933511-29933561	SK-N-SH	brain:	n/a
48	chr6:29920309-29920359	AG09319	gingival:	n/a
49	chr6:29924202-29924252	PFSK-1	brain:	n/a
50	chr6:29923954-29924004	HCF	heart:	n/a

(count:32 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr6:29921960..29924230-chr6:29934596..29936833,2	K562	blood:
2	chr6:29921960..29924230-chr6:29934596..29936833,2	K562	blood:
3	chr6:29917413..29919975-chr6:29932108..29934788,2	K562	blood:
4	chr6:29927397..29931336-chr6:29932208..29936273,8	K562	blood:
5	chr6:29933916..29936718-chr6:29943405..29945040,3	MCF-7	breast:
6	chr6:29820931..29821695-chr6:29935492..29936150,2	MCF-7	breast:
7	chr6:29931492..29933251-chr6:30034694..30036479,2	K562	blood:
8	chr6:29820057..29821697-chr6:29920603..29922626,2	K562	blood:
9	chr6:29937696..29939359-chr6:30032545..30034517,2	K562	blood:
10	chr6:29917426..29919477-chr6:29924161..29925991,2	K562	blood:
11	chr6:29929604..29934270-chr6:29942846..29948120,6	K562	blood:
12	chr6:29927397..29931336-chr6:29932208..29936273,8	K562	blood:
13	chr6:29917150..29919030-chr6:29920403..29922798,2	MCF-7	breast:
14	chr6:29764926..29767618-chr6:29920990..29923179,3	MCF-7	breast:
15	chr6:29917413..29919975-chr6:29932108..29934788,2	K562	blood:
16	chr6:29926306..29930004-chr6:29943804..29947247,3	K562	blood:
17	chr6:29815528..29816550-chr6:29935117..29936165,4	MCF-7	breast:
18	chr6:29937339..29939716-chr6:29942275..29944965,3	MCF-7	breast:
19	chr6:29917977..29920432-chr6:29924161..29926474,2	K562	blood:
20	chr6:29920547..29922811-chr6:29925895..29928597,2	MCF-7	breast:
21	chr6:29932263..29935141-chr6:29936079..29939709,3	K562	blood:
22	chr6:29920527..29922060-chr6:29926055..29928693,2	K562	blood:
23	chr6:29920547..29922811-chr6:29925895..29928597,2	MCF-7	breast:
24	chr6:29931972..29934794-chr6:30027595..30029471,2	K562	blood:
25	chr6:29931653..29934276-chr6:29943760..29946372,5	K562	blood:
26	chr6:29920527..29922060-chr6:29926055..29928693,2	K562	blood:
27	chr6:29820786..29821478-chr6:29935191..29935715,2	MCF-7	breast:
28	chr6:29937399..29939324-chr6:29949163..29951713,2	K562	blood:
29	chr6:29932263..29935141-chr6:29936079..29939709,3	K562	blood:
30	chr6:29892582..29894711-chr6:29932418..29935205,2	K562	blood:
31	chr6:29917150..29919030-chr6:29920403..29922798,2	MCF-7	breast:
32	chr14:77247003..77248532-chr6:29931290..29933642,2	K562	blood:

No data

Variant related genes	Relation type
HLA-W	TF binding region
HLA-W	CpG island
ENSG00000230795	chromatin interactions
ENSG00000235290	chromatin interactions
ENSG00000204619	chromatin interactions
ENSG00000204625	chromatin interactions
ENSG00000259081	chromatin interactions
ENSG00000066379	chromatin interactions
ENSG00000204623	chromatin interactions
ENSG00000233265	chromatin interactions

Extended variants
information (count: 1471 )
Associated
traits (count: 113 )

Variant overlapped rSNPs/rCNVs (count:1471 , 50 per page) page: 1 2 3 4 5 6 7 ... 30

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs2916805	chr6:29917503-29917504	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs56232426	chr6:29917505-29917506	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
3	rs147070312	chr6:29917516-29917517	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
4	rs568668790	chr6:29917519-29917520	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
5	rs114832186	chr6:29917535-29917536	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	mRNA abundance
6	rs185636123	chr6:29917566-29917567	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
7	rs9260364	chr6:29917568-29917569	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
8	rs564987409	chr6:29917571-29917572	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
9	rs372106947	chr6:29917573-29917574	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
10	rs1632880	chr6:29917610-29917611	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
11	rs2975044	chr6:29917673-29917674	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
12	rs373560639	chr6:29917692-29917693	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
13	rs566908297	chr6:29917694-29917695	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
14	rs375936986	chr6:29917695-29917696	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
15	rs9280802	chr6:29917696-29917697	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
16	rs386698588	chr6:29917701-29917702	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
17	rs113747743	chr6:29917702-29917703	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs1632879	chr6:29917703-29917704	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
19	rs76748682	chr6:29917723-29917724	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs546020186	chr6:29917728-29917729	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs552116185	chr6:29917760-29917761	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
22	rs369708086	chr6:29917768-29917769	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs9260367	chr6:29917783-29917784	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
24	rs2735093	chr6:29917800-29917801	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
25	rs9260368	chr6:29917801-29917802	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
26	rs9260369	chr6:29917810-29917811	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
27	rs116798559	chr6:29917833-29917834	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs576449269	chr6:29917855-29917856	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs370524407	chr6:29917856-29917857	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs9280803	chr6:29917857-29917858	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs540620731	chr6:29917865-29917866	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs2517714	chr6:29917881-29917882	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
33	rs112206517	chr6:29917882-29917883	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
34	rs9260370	chr6:29917899-29917900	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
35	rs200220324	chr6:29917904-29917905	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
36	rs9278483	chr6:29917906-29917907	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs9260371	chr6:29917913-29917914	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
38	rs558919238	chr6:29917914-29917915	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs386698589	chr6:29917924-29917925	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
40	rs9260373	chr6:29917925-29917926	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
41	rs548486040	chr6:29917936-29917937	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs577382908	chr6:29917940-29917941	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs533979133	chr6:29917947-29917948	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs9260374	chr6:29917974-29917975	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
45	rs559493318	chr6:29917983-29917984	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
46	rs9260375	chr6:29917991-29917992	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
47	rs141928059	chr6:29918011-29918012	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
48	rs556594855	chr6:29918013-29918014	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
49	rs150251128	chr6:29918014-29918015	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
50	rs9260376	chr6:29918019-29918020	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a

Variant related diseases (count:113)

Disease	PMID	Source
Acute lymphoblastic leukemia	22237106	CNVD
Follicular lymphoma	20505157	CNVD
Glioblastoma multiforme	21080181	CNVD
Ewing''s sarcoma	21437220	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Leukemia	21518781	CNVD
Cancer	21637783	CNVD
Facial dysmorphism	22105932	CNVD
Medulloblastoma	21979893	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Endometrial cancer	22040021	CNVD
Acute myeloid leukemia	16864856	CNVD
Breast cancer	21264507	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	16751803	CNVD
Bladder cancer	19088036	CNVD
Wilms tumour	21544195	CNVD
Uveal melanoma	21693616	CNVD
Biliary cancer	19435499	CNVD
Malaria	21533027	CNVD
Retinoblastoma	19183342	CNVD
Acute myeloid leukemia	20729466	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	21858162	CNVD
Lung cancer	18438408	CNVD
Ewing''s sarcoma	17952124	CNVD
Lung cancer	20668451	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Autism	21448237	CNVD
Cancer	20164919	CNVD
Melanoma	18172304	CNVD
Breast cancer	22844521	CNVD
HIV/AIDS	22844521	CNVD
Ovarian cancer	22844521	CNVD
Prostate cancer	22844521	CNVD
Psoriasis	22844521	CNVD
Rheumatoid arthritis	22844521	CNVD
Sclerosis systemic	22844521	CNVD
Systemic lupus erythematosus	22844521	CNVD
Breast cancer	22522925	CNVD
Ovarian cancer	21781307	CNVD
Breast cancer	21552322	CNVD
Immune disease	21076436	CNVD
Autoimmune disease	19135723	CNVD
Systemic lupus erythematosus	17953491	CNVD
Recurrent Infections	22737222	CNVD
Systemic lupus erythematosus	21904924	CNVD
Ependymoma	19289631	CNVD
Gestational infection	22844521	CNVD
Head circumference	22844521	CNVD
Infertility	22844521	CNVD
Recurrent birth weight diabetes	22844521	CNVD
Obesity	22844521	CNVD
Recurrent pregnancy loss	22844521	CNVD
Intellectual disability	21811512	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Congenital anomalies of the kidney and urinary tract	18694510	CNVD
Nasopharyngeal cancer	22815911	CNVD
Hepatocellular carcinoma	16750200	CNVD
Basal cell lymphoma	21115979	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Breast cancer	17133270	CNVD
Autism	22495311	CNVD
Cancer	16790693	CNVD
Cervical cancer	21062161	CNVD
Breast cancer	21785460	CNVD
Retinoblastoma	16790693	CNVD
Esophageal adenocarcinoma	18820669	CNVD
Systemic lupus erythematosus	17503323	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Urothelial carcinoma	18382360	CNVD
Cancer	21183584	CNVD
Hodgkin''s lymphoma	17606441	CNVD
small cell lung cancer	20016488	CNVD
Renal cell carcinoma	18765545	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Gastric cancer	17908304	CNVD
Metanephric adenoma	20802469	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Schizophrenia	19571809	CNVD
Schizophrenia	19571808	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Neuroblastoma	16790693	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
abnormal development	18461090	CNVD
Breast cancer	21509527	CNVD
Melanoma	17363583	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	16397240	CNVD
Retinoblastoma	22278416	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Systemic lupus erythematosus	20877625	CNVD
Cleidocranial dysplasia	18696259	CNVD
Holoprosencephaly	21359414	CNVD
Liposarcoma	21253554	CNVD
Uveal melanoma	20484589	CNVD
Fibroblasts	20926602	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Non-syndromic sensorineural hearing loss	17289997	CNVD
Pancreatic cancer	17952125	CNVD
Glioma	20126413	CNVD

Chromatin state (count:822 , 50 per page) page: 1 2 3 4 5 6 7 ... 17

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:29911200-29920200	Weak transcription	A549	lung
2	chr6:29911200-29921400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr6:29911600-29920400	Weak transcription	Fetal Brain Male	brain
4	chr6:29911800-29917600	Strong transcription	Fetal Intestine Large	intestine
5	chr6:29912400-29918000	Strong transcription	Fetal Intestine Small	intestine
6	chr6:29912600-29921000	Weak transcription	Psoas Muscle	Psoas
7	chr6:29912800-29924200	Weak transcription	Right Atrium	heart
8	chr6:29913000-29924000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
9	chr6:29913000-29924200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
10	chr6:29913400-29917800	Strong transcription	Breast Myoepithelial Primary Cells	Breast
11	chr6:29913400-29917800	Weak transcription	Hela-S3	cervix
12	chr6:29913400-29918800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
13	chr6:29913400-29919600	Weak transcription	Fetal Muscle Trunk	muscle
14	chr6:29913400-29920800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
15	chr6:29913400-29932200	Weak transcription	Brain Anterior Caudate	brain
16	chr6:29913400-29932600	Weak transcription	Brain Substantia Nigra	brain
17	chr6:29913600-29918800	Weak transcription	Muscle Satellite Cultured Cells	--
18	chr6:29913600-29919200	Weak transcription	HUES64 Cell Line	embryonic stem cell
19	chr6:29913600-29920400	Weak transcription	HMEC	breast
20	chr6:29913600-29921600	Weak transcription	NHEK	skin
21	chr6:29913600-29924400	Weak transcription	H1 Cell Line	embryonic stem cell
22	chr6:29913600-29925400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
23	chr6:29913800-29921000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
24	chr6:29913800-29932200	Weak transcription	Small Intestine	intestine
25	chr6:29914000-29917600	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
26	chr6:29914000-29918000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
27	chr6:29914000-29918200	Strong transcription	Rectal Mucosa Donor 29	rectum
28	chr6:29914000-29918200	Strong transcription	Thymus	Thymus
29	chr6:29914000-29920600	Weak transcription	NHLF	lung
30	chr6:29914000-29921000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
31	chr6:29914000-29923800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
32	chr6:29914000-29924200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
33	chr6:29914000-29932200	Weak transcription	Colon Smooth Muscle	Colon
34	chr6:29914200-29918000	Genic enhancers	Primary T cells fromperipheralblood	blood
35	chr6:29914200-29918000	Strong transcription	Monocytes-CD14+_RO01746	blood
36	chr6:29914200-29918200	Strong transcription	Primary monocytes fromperipheralblood	blood
37	chr6:29914200-29919000	Strong transcription	Primary B cells from cord blood	blood
38	chr6:29914200-29919200	Weak transcription	HUES48 Cell Line	embryonic stem cell
39	chr6:29914200-29920800	Weak transcription	Cortex derived primary cultured neurospheres	brain
40	chr6:29914400-29917800	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
41	chr6:29914600-29920200	Weak transcription	Osteobl	bone
42	chr6:29914600-29932200	Weak transcription	Colonic Mucosa	Colon
43	chr6:29914800-29918000	Genic enhancers	Primary T killer naive cells fromperipheralblood	blood
44	chr6:29914800-29932200	Weak transcription	Right Ventricle	heart
45	chr6:29915000-29918000	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
46	chr6:29915200-29918400	Strong transcription	Primary neutrophils fromperipheralblood	blood
47	chr6:29915200-29920600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
48	chr6:29915400-29918000	Strong transcription	Primary B cells from peripheral blood	blood
49	chr6:29915400-29918000	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
50	chr6:29915400-29920400	Weak transcription	HSMM	muscle

The 2.0 version of rSNPBase

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