Variant report

Variant	nsv884465
Chromosome Location	chr6:31805389-31818580
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:40)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:40 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr6:31812766..31815515-chr6:31830788..31832645,2	K562	blood:
2	chr6:31803990..31806815-chr6:31815888..31817775,2	MCF-7	breast:
3	chr6:31805278..31808004-chr6:31924712..31926962,2	K562	blood:
4	chr6:31812540..31817762-chr6:31828557..31832875,6	MCF-7	breast:
5	chr6:31811833..31815343-chr6:31817409..31821248,7	K562	blood:
6	chr6:31737226..31750413-chr6:31786206..31805473,50	MCF-7	breast:
7	chr6:31808421..31810311-chr6:31817022..31818530,2	MCF-7	breast:
8	chr6:31815431..31818520-chr6:31828570..31831003,3	K562	blood:
9	chr6:31815422..31817421-chr6:31818452..31821417,3	K562	blood:
10	chr6:31801616..31806746-chr6:31865132..31870777,8	MCF-7	breast:
11	chr6:31804952..31806985-chr6:32013616..32015353,2	K562	blood:
12	chr6:31810060..31812740-chr6:32077542..32080082,2	K562	blood:
13	chr6:31702549..31706090-chr6:31802474..31805993,4	MCF-7	breast:
14	chr6:31811833..31815343-chr6:31817409..31821248,7	K562	blood:
15	chr6:31815422..31817421-chr6:31818452..31821417,3	K562	blood:
16	chr6:31807124..31808732-chr6:31933080..31935143,2	K562	blood:
17	chr6:31800755..31815108-chr6:31823340..31833266,54	K562	blood:
18	chr6:31812854..31815463-chr6:31856420..31858260,2	K562	blood:
19	chr6:31813640..31815639-chr6:31868886..31870466,2	MCF-7	breast:
20	chr6:31808421..31810311-chr6:31817022..31818530,2	MCF-7	breast:
21	chr6:31810854..31812545-chr6:31814196..31816031,2	MCF-7	breast:
22	chr6:31802543..31804424-chr6:31810927..31813867,2	MCF-7	breast:
23	chr6:31801090..31813654-chr6:31824519..31834411,41	MCF-7	breast:
24	chr6:31696408..31700150-chr6:31800226..31805691,5	MCF-7	breast:
25	chr6:31800867..31807275-chr6:31862460..31868132,16	K562	blood:
26	chr6:31800580..31812447-chr6:31823435..31837480,47	K562	blood:
27	chr6:31810854..31812545-chr6:31814196..31816031,2	MCF-7	breast:
28	chr6:31813210..31815471-chr6:31820927..31823318,2	MCF-7	breast:
29	chr6:31800806..31810142-chr6:31827604..31833040,24	MCF-7	breast:
30	chr6:31630921..31635353-chr6:31802314..31807064,6	MCF-7	breast:
31	chr6:31508602..31511012-chr6:31803135..31806104,3	K562	blood:
32	chr6:31735011..31745595-chr6:31798203..31806127,22	MCF-7	breast:
33	chr1:154830014..154831577-chr6:31809567..31811071,2	K562	blood:
34	chr6:31812130..31814477-chr6:31875072..31877975,2	K562	blood:
35	chr6:31810968..31813614-chr6:31853441..31855643,2	MCF-7	breast:
36	chr6:31817673..31819263-chr6:31821738..31824406,2	MCF-7	breast:
37	chr6:31812462..31817546-chr6:31826667..31830345,6	K562	blood:
38	chr6:31509889..31512472-chr6:31802635..31805585,2	MCF-7	breast:
39	chr6:31805576..31807275-chr6:31863517..31866443,2	K562	blood:
40	chr6:31761835..31764284-chr6:31804973..31807554,3	MCF-7	breast:

No data

Variant related genes	Relation type
ENSG00000213719	chromatin interactions
ENSG00000263020	chromatin interactions
ENSG00000204366	chromatin interactions
ENSG00000265236	chromatin interactions
ENSG00000204438	chromatin interactions
ENSG00000204356	chromatin interactions
ENSG00000204385	chromatin interactions
ENSG00000201823	chromatin interactions
ENSG00000204435	chromatin interactions
ENSG00000221267	chromatin interactions
ENSG00000204371	chromatin interactions
ENSG00000234006	chromatin interactions
ENSG00000201754	chromatin interactions
ENSG00000204351	chromatin interactions
ENSG00000201207	chromatin interactions
ENSG00000166278	chromatin interactions
ENSG00000168477	chromatin interactions
ENSG00000204387	chromatin interactions
ENSG00000204396	chromatin interactions
ENSG00000201555	chromatin interactions
ENSG00000198563	chromatin interactions
ENSG00000213722	chromatin interactions
ENSG00000204386	chromatin interactions
ENSG00000204394	chromatin interactions

Extended variants
information (count: 481 )
Associated
traits (count: 132 )

Variant overlapped rSNPs/rCNVs (count:481 , 50 per page) page: 1 2 3 4 5 6 7 ... 10

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs535847770	chr6:31805390-31805391	Transcr. at gene 5' and 3' Weak transcription Active TSS Genic enhancers Flanking Active TSS Strong transcription Enhancers	Chromatin interactive region	21 gene(s)	Overlapped CNVs	n/a
2	rs550949156	chr6:31805392-31805393	Transcr. at gene 5' and 3' Weak transcription Active TSS Genic enhancers Flanking Active TSS Strong transcription Enhancers	Chromatin interactive region	21 gene(s)	Overlapped CNVs	n/a
3	rs191377069	chr6:31805398-31805399	Transcr. at gene 5' and 3' Weak transcription Active TSS Genic enhancers Flanking Active TSS Strong transcription Enhancers	Chromatin interactive region	21 gene(s)	Overlapped CNVs	n/a
4	rs539640030	chr6:31805420-31805421	Genic enhancers Weak transcription Transcr. at gene 5' and 3' Active TSS Strong transcription Flanking Active TSS	Chromatin interactive region	21 gene(s)	Overlapped CNVs	n/a
5	rs558410853	chr6:31805471-31805472	Genic enhancers Weak transcription Transcr. at gene 5' and 3' Active TSS Strong transcription Flanking Active TSS	Chromatin interactive region	21 gene(s)	Overlapped CNVs	n/a
6	rs576996923	chr6:31805513-31805514	Genic enhancers Weak transcription Transcr. at gene 5' and 3' Active TSS Strong transcription Flanking Active TSS	Chromatin interactive region	20 gene(s)	Overlapped CNVs	n/a
7	rs183902104	chr6:31805553-31805554	Genic enhancers Weak transcription Transcr. at gene 5' and 3' Active TSS Strong transcription Flanking Active TSS	Chromatin interactive region	20 gene(s)	Overlapped CNVs	n/a
8	rs115035968	chr6:31805593-31805594	Genic enhancers Weak transcription Transcr. at gene 5' and 3' Active TSS Strong transcription Flanking Active TSS	Chromatin interactive region	20 gene(s)	Overlapped CNVs	n/a
9	rs115487693	chr6:31805600-31805601	Genic enhancers Weak transcription Transcr. at gene 5' and 3' Active TSS Strong transcription Flanking Active TSS Enhancers	Chromatin interactive region	20 gene(s)	Overlapped CNVs	n/a
10	rs541851449	chr6:31805636-31805637	Genic enhancers Weak transcription Transcr. at gene 5' and 3' Active TSS Strong transcription Flanking Active TSS Enhancers	Chromatin interactive region	20 gene(s)	Overlapped CNVs	n/a
11	rs188574271	chr6:31805692-31805693	Genic enhancers Weak transcription Transcr. at gene 5' and 3' Active TSS Strong transcription Flanking Active TSS Enhancers	Chromatin interactive region	19 gene(s)	Overlapped CNVs	n/a
12	rs542217072	chr6:31805693-31805694	Genic enhancers Weak transcription Transcr. at gene 5' and 3' Active TSS Strong transcription Flanking Active TSS Enhancers	Chromatin interactive region	19 gene(s)	Overlapped CNVs	n/a
13	rs150426110	chr6:31805757-31805758	Genic enhancers Weak transcription Transcr. at gene 5' and 3' Active TSS Strong transcription Flanking Active TSS Enhancers	Chromatin interactive region	19 gene(s)	Overlapped CNVs	n/a
14	rs138297208	chr6:31805780-31805781	Genic enhancers Weak transcription Transcr. at gene 5' and 3' Active TSS Strong transcription Flanking Active TSS Enhancers	Chromatin interactive region	19 gene(s)	Overlapped CNVs	n/a
15	rs371687317	chr6:31805807-31805808	Strong transcription Weak transcription Transcr. at gene 5' and 3' Active TSS Genic enhancers Enhancers Flanking Active TSS	Chromatin interactive region	19 gene(s)	Overlapped CNVs	n/a
16	rs181335065	chr6:31805831-31805832	Strong transcription Weak transcription Transcr. at gene 5' and 3' Active TSS Genic enhancers Enhancers Flanking Active TSS	Chromatin interactive region	19 gene(s)	Overlapped CNVs	n/a
17	rs13218682	chr6:31805888-31805889	Strong transcription Weak transcription Transcr. at gene 5' and 3' Active TSS Genic enhancers Enhancers Flanking Active TSS	Chromatin interactive region	19 gene(s)	Overlapped CNVs	n/a
18	rs563616167	chr6:31805901-31805902	Strong transcription Weak transcription Transcr. at gene 5' and 3' Active TSS Genic enhancers Enhancers Flanking Active TSS	Chromatin interactive region	19 gene(s)	Overlapped CNVs	n/a
19	rs528293842	chr6:31805902-31805903	Strong transcription Weak transcription Transcr. at gene 5' and 3' Active TSS Genic enhancers Enhancers Flanking Active TSS	Chromatin interactive region	19 gene(s)	Overlapped CNVs	n/a
20	rs55670660	chr6:31805903-31805904	Strong transcription Weak transcription Transcr. at gene 5' and 3' Active TSS Genic enhancers Enhancers Flanking Active TSS	Chromatin interactive region	19 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
21	rs200269212	chr6:31805918-31805919	Strong transcription Weak transcription Transcr. at gene 5' and 3' Active TSS Genic enhancers Enhancers Flanking Active TSS	Chromatin interactive region	19 gene(s)	Overlapped CNVs	n/a
22	rs529260810	chr6:31805952-31805953	Strong transcription Weak transcription Transcr. at gene 5' and 3' Active TSS Genic enhancers Enhancers Flanking Active TSS	Chromatin interactive region	19 gene(s)	Overlapped CNVs	n/a
23	rs146912935	chr6:31806000-31806001	Strong transcription Weak transcription Transcr. at gene 5' and 3' Active TSS Genic enhancers Enhancers Flanking Active TSS	Chromatin interactive region	18 gene(s)	Overlapped CNVs	n/a
24	rs569425825	chr6:31806004-31806005	Strong transcription Weak transcription Transcr. at gene 5' and 3' Active TSS Genic enhancers Enhancers Flanking Active TSS	Chromatin interactive region	18 gene(s)	Overlapped CNVs	n/a
25	rs139374839	chr6:31806025-31806026	Strong transcription Weak transcription Transcr. at gene 5' and 3' Active TSS Genic enhancers Enhancers Flanking Active TSS	Chromatin interactive region	18 gene(s)	Overlapped CNVs	n/a
26	rs552117637	chr6:31806036-31806037	Strong transcription Weak transcription Transcr. at gene 5' and 3' Active TSS Genic enhancers Enhancers Flanking Active TSS	Chromatin interactive region	18 gene(s)	Overlapped CNVs	n/a
27	rs373181841	chr6:31806075-31806076	Strong transcription Weak transcription Transcr. at gene 5' and 3' Active TSS Genic enhancers Enhancers Flanking Active TSS	Chromatin interactive region	18 gene(s)	Overlapped CNVs	n/a
28	rs567042107	chr6:31806098-31806099	Strong transcription Weak transcription Transcr. at gene 5' and 3' Active TSS Genic enhancers Enhancers Flanking Active TSS	Chromatin interactive region	18 gene(s)	Overlapped CNVs	n/a
29	rs143271592	chr6:31806152-31806153	Strong transcription Weak transcription Transcr. at gene 5' and 3' Active TSS Genic enhancers Enhancers Flanking Active TSS	Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
30	rs553063007	chr6:31806153-31806154	Strong transcription Weak transcription Transcr. at gene 5' and 3' Active TSS Genic enhancers Enhancers Flanking Active TSS	Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
31	rs568195971	chr6:31806177-31806178	Strong transcription Weak transcription Transcr. at gene 5' and 3' Active TSS Genic enhancers Enhancers Flanking Active TSS	Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
32	rs567991858	chr6:31806224-31806225	Strong transcription Weak transcription Transcr. at gene 5' and 3' Active TSS Genic enhancers Enhancers	Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
33	rs143878283	chr6:31806225-31806226	Strong transcription Weak transcription Transcr. at gene 5' and 3' Active TSS Genic enhancers Enhancers	Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
34	rs575148561	chr6:31806289-31806290	Strong transcription Weak transcription Transcr. at gene 5' and 3' Active TSS Genic enhancers Enhancers	Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
35	rs148609831	chr6:31806305-31806306	Strong transcription Weak transcription Transcr. at gene 5' and 3' Active TSS Genic enhancers Enhancers	Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
36	rs141229953	chr6:31806341-31806342	Strong transcription Weak transcription Transcr. at gene 5' and 3' Active TSS Genic enhancers Enhancers	Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
37	rs186816694	chr6:31806359-31806360	Strong transcription Weak transcription Transcr. at gene 5' and 3' Active TSS Genic enhancers Enhancers	Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
38	rs150739667	chr6:31806428-31806429	Strong transcription Weak transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' Enhancers	Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
39	rs562036584	chr6:31806441-31806442	Strong transcription Weak transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' Enhancers	Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
40	rs139341962	chr6:31806473-31806474	Strong transcription Weak transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' Enhancers	Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
41	rs62395832	chr6:31806483-31806484	Strong transcription Weak transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' Enhancers	Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
42	rs368067096	chr6:31806530-31806531	Strong transcription Weak transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' Enhancers	Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
43	rs533192773	chr6:31806543-31806544	Strong transcription Weak transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' Enhancers	Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
44	rs567180044	chr6:31806631-31806632	Strong transcription Weak transcription Active TSS Genic enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
45	rs559692233	chr6:31806655-31806656	Strong transcription Weak transcription Active TSS Genic enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
46	rs146478182	chr6:31806659-31806660	Strong transcription Weak transcription Active TSS Genic enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
47	rs549627387	chr6:31806717-31806718	Strong transcription Weak transcription Active TSS Genic enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
48	rs139973522	chr6:31806727-31806728	Strong transcription Weak transcription Active TSS Genic enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
49	rs553093400	chr6:31806742-31806743	Strong transcription Weak transcription Active TSS Genic enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
50	rs535500850	chr6:31806797-31806798	Strong transcription Weak transcription Active TSS Genic enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:132)

Disease	PMID	Source
Follicular lymphoma	20505157	CNVD
Glioblastoma multiforme	21080181	CNVD
Ewing''s sarcoma	21437220	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Leukemia	21518781	CNVD
Cancer	21637783	CNVD
Facial dysmorphism	22105932	CNVD
Medulloblastoma	21979893	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Endometrial cancer	22040021	CNVD
Acute myeloid leukemia	16864856	CNVD
Breast cancer	21264507	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	16751803	CNVD
Bladder cancer	19088036	CNVD
Wilms tumour	21544195	CNVD
Uveal melanoma	21693616	CNVD
Biliary cancer	19435499	CNVD
Malaria	21533027	CNVD
Retinoblastoma	19183342	CNVD
Acute myeloid leukemia	20729466	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	21858162	CNVD
Lung cancer	18438408	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	21448237	CNVD
Melanoma	18172304	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Breast cancer	21552322	CNVD
Immune disease	21076436	CNVD
Autoimmune disease	19135723	CNVD
Systemic lupus erythematosus	17953491	CNVD
Recurrent Infections	22737222	CNVD
Systemic lupus erythematosus	21904924	CNVD
Ovarian cancer	21781307	CNVD
Ependymoma	19289631	CNVD
Breast cancer	22844521	CNVD
Gestational infection	22844521	CNVD
HIV/AIDS	22844521	CNVD
Head circumference	22844521	CNVD
Infertility	22844521	CNVD
Ovarian cancer	22844521	CNVD
Prostate cancer	22844521	CNVD
Psoriasis	22844521	CNVD
Recurrent birth weight diabetes	22844521	CNVD
Rheumatoid arthritis	22844521	CNVD
Sclerosis systemic	22844521	CNVD
Systemic lupus erythematosus	22844521	CNVD
Obesity	22844521	CNVD
Recurrent pregnancy loss	22844521	CNVD
Intellectual disability	21811512	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Congenital anomalies of the kidney and urinary tract	18694510	CNVD
Nasopharyngeal cancer	22815911	CNVD
Hepatocellular carcinoma	16750200	CNVD
Basal cell lymphoma	21115979	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Autism	22495311	CNVD
Cancer	16790693	CNVD
Cervical cancer	21062161	CNVD
Esophageal adenocarcinoma	18820669	CNVD
Systemic lupus erythematosus	17503323	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Urothelial carcinoma	18382360	CNVD
Cancer	21183584	CNVD
Hodgkin''s lymphoma	17606441	CNVD
small cell lung cancer	20016488	CNVD
Renal cell carcinoma	18765545	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Gastric cancer	17908304	CNVD
Metanephric adenoma	20802469	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Schizophrenia	19571808	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Neuroblastoma	16790693	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
abnormal development	18461090	CNVD
Melanoma	17363583	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	16397240	CNVD
Retinoblastoma	22278416	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Systemic lupus erythematosus	20877625	CNVD
Cleidocranial dysplasia	18696259	CNVD
Holoprosencephaly	21359414	CNVD
Liposarcoma	21253554	CNVD
Uveal melanoma	20484589	CNVD
Fibroblasts	20926602	CNVD
Breast cancer	21364760	CNVD
Systemic lupus erythematosus	19279649	CNVD
Retinoblastoma	16790693	CNVD
Acute myocardial infarction	18032375	CNVD
Renal cell carcinoma	19150565	CNVD
Systemic lupus erythematosus	19591781	CNVD
Attention deficit hyperactivity disorder	19287146	CNVD
Autism	19287146	CNVD
Erythema nodosum in leprosy	19287146	CNVD
Henoch-schoenlein purpura	19287146	CNVD
Liver cirrhosis	19287146	CNVD
Systemic lupus erythematosus	19287146	CNVD
Congenital adrenal hyperplasia	18478071	CNVD
Systemic lupus erythematosus	19287147	CNVD
Osteosarcoma	16790693	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Urothelial carcinoma	21177765	CNVD
Oral cancer	21386901	CNVD
Cancer	22183965	CNVD
Melanoma	22183965	CNVD
Breast cancer	22522925	CNVD
Melanoma	20877625	CNVD
Pancreatic cancer	17952125	CNVD

Chromatin state (count:514 , 50 per page) page: 1 2 3 4 5 6 7 ... 11

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:31802000-31807000	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr6:31802200-31806400	Transcr. at gene 5' and 3'	Primary T helper 17 cells PMA-I stimulated	--
3	chr6:31802600-31806400	Transcr. at gene 5' and 3'	HUES6 Cell Line	embryonic stem cell
4	chr6:31802800-31806400	Transcr. at gene 5' and 3'	iPS-15b Cell Line	embryonic stem cell
5	chr6:31802800-31807400	Transcr. at gene 5' and 3'	iPS-20b Cell Line	embryonic stem cell
6	chr6:31803000-31807400	Transcr. at gene 5' and 3'	K562	blood
7	chr6:31803000-31817200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
8	chr6:31803200-31805400	Flanking Active TSS	Primary hematopoietic stem cells	blood
9	chr6:31803400-31805400	Transcr. at gene 5' and 3'	Fetal Muscle Leg	muscle
10	chr6:31803400-31806400	Transcr. at gene 5' and 3'	H1 Cell Line	embryonic stem cell
11	chr6:31803600-31805400	Transcr. at gene 5' and 3'	ES-I3 Cell Line	embryonic stem cell
12	chr6:31803600-31805400	Flanking Active TSS	Primary T helper memory cells from peripheral blood 1	blood
13	chr6:31803600-31805400	Flanking Active TSS	Brain Germinal Matrix	brain
14	chr6:31803600-31806200	Transcr. at gene 5' and 3'	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
15	chr6:31803600-31807000	Transcr. at gene 5' and 3'	HUES64 Cell Line	embryonic stem cell
16	chr6:31803800-31805400	Transcr. at gene 5' and 3'	Left Ventricle	heart
17	chr6:31803800-31805600	Transcr. at gene 5' and 3'	Fetal Muscle Trunk	muscle
18	chr6:31803800-31805800	Transcr. at gene 5' and 3'	H9 Derived Neuron Cultured Cells	ES cell derived
19	chr6:31803800-31805800	Transcr. at gene 5' and 3'	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
20	chr6:31803800-31805800	Transcr. at gene 5' and 3'	IMR90 fetal lung fibroblasts Cell Line	lung
21	chr6:31803800-31805800	Transcr. at gene 5' and 3'	Fetal Intestine Large	intestine
22	chr6:31803800-31805800	Transcr. at gene 5' and 3'	Fetal Intestine Small	intestine
23	chr6:31803800-31805800	Transcr. at gene 5' and 3'	NHEK	skin
24	chr6:31803800-31806000	Transcr. at gene 5' and 3'	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
25	chr6:31803800-31806000	Transcr. at gene 5' and 3'	ES-UCSF4 Cell Line	embryonic stem cell
26	chr6:31803800-31806400	Transcr. at gene 5' and 3'	H9 Cell Line	embryonic stem cell
27	chr6:31803800-31806400	Transcr. at gene 5' and 3'	Dnd41	blood
28	chr6:31803800-31806400	Transcr. at gene 5' and 3'	Osteobl	bone
29	chr6:31803800-31807200	Transcr. at gene 5' and 3'	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
30	chr6:31803800-31807200	Transcr. at gene 5' and 3'	HUES48 Cell Line	embryonic stem cell
31	chr6:31803800-31807200	Transcr. at gene 5' and 3'	Primary hematopoietic stem cells short term culture	blood
32	chr6:31803800-31807400	Transcr. at gene 5' and 3'	iPS-18 Cell Line	embryonic stem cell
33	chr6:31803800-31807400	Transcr. at gene 5' and 3'	Foreskin Keratinocyte Primary Cells skin03	Skin
34	chr6:31804000-31805600	Transcr. at gene 5' and 3'	Breast Myoepithelial Primary Cells	Breast
35	chr6:31804000-31805800	Transcr. at gene 5' and 3'	Duodenum Mucosa	Duodenum
36	chr6:31804000-31805800	Transcr. at gene 5' and 3'	HepG2	liver
37	chr6:31804000-31805800	Transcr. at gene 5' and 3'	NHDF-Ad	bronchial
38	chr6:31804000-31806000	Transcr. at gene 5' and 3'	Muscle Satellite Cultured Cells	--
39	chr6:31804000-31806000	Transcr. at gene 5' and 3'	Fetal Thymus	thymus
40	chr6:31804000-31806400	Transcr. at gene 5' and 3'	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
41	chr6:31804000-31806400	Transcr. at gene 5' and 3'	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
42	chr6:31804000-31806400	Transcr. at gene 5' and 3'	HSMM	muscle
43	chr6:31804000-31806400	Transcr. at gene 5' and 3'	NH-A	brain
44	chr6:31804000-31806600	Transcr. at gene 5' and 3'	Primary T helper cells PMA-I stimulated	--
45	chr6:31804000-31806600	Transcr. at gene 5' and 3'	HUVEC	blood vessel
46	chr6:31804000-31807000	Genic enhancers	Primary Natural Killer cells fromperipheralblood	blood
47	chr6:31804000-31807200	Transcr. at gene 5' and 3'	A549	lung
48	chr6:31804200-31805600	Transcr. at gene 5' and 3'	Cortex derived primary cultured neurospheres	brain
49	chr6:31804200-31805600	Transcr. at gene 5' and 3'	Ganglion Eminence derived primary cultured neurospheres	brain
50	chr6:31804200-31805600	Transcr. at gene 5' and 3'	Stomach Smooth Muscle	stomach

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links