Variant report

Variant	nsv885799
Chromosome Location	chr6:35378778-35442397
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:2675)
CpG islands
(count:2197)
Chromatin interactive
region (count:183)
LncRNA
region (count:3)
Mature miRNA
region (count: 2)
miRNA target
sites (count:0)

(count:2675 , 50 per page) page: 1 2 3 4 5 6 7 ... 54

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr6:35420069-35420086	K562	blood:	n/a	n/a
2	ARID3A	chr6:35382989-35383735	HepG2	liver:	n/a	n/a
3	ARID3A	chr6:35417234-35417536	HepG2	liver:	n/a	n/a
4	ARID3A	chr6:35396271-35396729	HepG2	liver:	n/a	n/a
5	ATF2	chr6:35438459-35439359	H1-hESC	embryonic stem cell:	n/a	n/a
6	ATF2	chr6:35435747-35436494	H1-hESC	embryonic stem cell:	n/a	n/a
7	ATF2	chr6:35437128-35437647	H1-hESC	embryonic stem cell:	n/a	n/a
8	ATF2	chr6:35440827-35441371	H1-hESC	embryonic stem cell:	n/a	n/a
9	ATF2	chr6:35438515-35439298	H1-hESC	embryonic stem cell:	n/a	n/a
10	ATF2	chr6:35435840-35436516	GM12878	blood:	n/a	n/a
11	ATF2	chr6:35435861-35437199	H1-hESC	embryonic stem cell:	n/a	n/a
12	ATF2	chr6:35435797-35436505	GM12878	blood:	n/a	n/a
13	ATF2	chr6:35436497-35436967	H1-hESC	embryonic stem cell:	n/a	n/a
14	ATF2	chr6:35441432-35441842	H1-hESC	embryonic stem cell:	n/a	n/a
15	ATF2	chr6:35439423-35440708	H1-hESC	embryonic stem cell:	n/a	n/a
16	ATF2	chr6:35440124-35440725	H1-hESC	embryonic stem cell:	n/a	n/a
17	ATF2	chr6:35437521-35438018	H1-hESC	embryonic stem cell:	n/a	n/a
18	ATF2	chr6:35441450-35442069	H1-hESC	embryonic stem cell:	n/a	n/a
19	ATF3	chr6:35435862-35436352	A549	lung:	n/a	n/a
20	ATF3	chr6:35407157-35407351	K562	blood:	n/a	n/a
21	ATF3	chr6:35435875-35436437	A549	lung:	n/a	n/a
22	BACH1	chr6:35435387-35436423	H1-hESC	embryonic stem cell:	n/a	n/a
23	BATF	chr6:35435954-35436320	GM12878	blood:	n/a	n/a
24	BCL11A	chr6:35435953-35436377	GM12878	blood:	n/a	n/a
25	BCL3	chr6:35441429-35441982	A549	lung:	n/a	n/a
26	BCL3	chr6:35435848-35436505	A549	lung:	n/a	n/a
27	BCL3	chr6:35435817-35436444	GM12878	blood:	n/a	n/a
28	BCL3	chr6:35439691-35440589	A549	lung:	n/a	n/a
29	BCL3	chr6:35440860-35442286	K562	blood:	n/a	chr6:35441115-35441122
30	BCL3	chr6:35438539-35439323	A549	lung:	n/a	n/a
31	BCL3	chr6:35440833-35441341	GM12878	blood:	n/a	chr6:35441115-35441122
32	BCL3	chr6:35439588-35439989	A549	lung:	n/a	n/a
33	BCL3	chr6:35440027-35440409	K562	blood:	n/a	n/a
34	BCL3	chr6:35439364-35440722	K562	blood:	n/a	n/a
35	BCL3	chr6:35435670-35436519	A549	lung:	n/a	n/a
36	BCL3	chr6:35441519-35441852	A549	lung:	n/a	n/a
37	BCLAF1	chr6:35439566-35440584	K562	blood:	n/a	n/a
38	BCLAF1	chr6:35440824-35441244	GM12878	blood:	n/a	chr6:35441115-35441122
39	BCLAF1	chr6:35439957-35440332	GM12878	blood:	n/a	n/a
40	BCLAF1	chr6:35435736-35436639	GM12878	blood:	n/a	n/a
41	BCLAF1	chr6:35435812-35436622	GM12878	blood:	n/a	n/a
42	BCLAF1	chr6:35439581-35440342	GM12878	blood:	n/a	n/a
43	BHLHE40	chr6:35417246-35417608	K562	blood:	n/a	n/a
44	BHLHE40	chr6:35435377-35436695	K562	blood:	n/a	chr6:35435946-35435962
45	BHLHE40	chr6:35438196-35438779	K562	blood:	n/a	n/a
46	BHLHE40	chr6:35439921-35440306	K562	blood:	n/a	n/a
47	BHLHE40	chr6:35437509-35437927	K562	blood:	n/a	n/a
48	BHLHE40	chr6:35436943-35437771	GM12878	blood:	n/a	n/a
49	BHLHE40	chr6:35420869-35421061	GM12878	blood:	n/a	n/a
50	BHLHE40	chr6:35396260-35396788	HepG2	liver:	n/a	n/a

(count:2197 , 50 per page) page: 1 2 3 4 5 6 7 ... 44

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:35436047-35436097	HRCEpiC	kidney:	n/a
2	chr6:35436047-35436097	HRCEpiC	kidney:	n/a
3	chr6:35437101-35437151	PANC-1	pancreas:	n/a
4	chr6:35436792-35436842	PFSK-1	brain:	n/a
5	chr6:35436252-35436302	RPTEC	kidney:	n/a
6	chr6:35435985-35436035	HEK293	kidney:	embryo
7	chr6:35436252-35436302	Jurkat	blood:	n/a
8	chr6:35436891-35436941	HPAEpiC	pulmonary alveolar:	n/a
9	chr6:35419793-35419843	A549	lung:	n/a
10	chr6:35437101-35437151	AG10803	skin:	n/a
11	chr6:35395209-35395259	HCF	heart:	n/a
12	chr6:35419591-35419641	U87	brain:	n/a
13	chr6:35441048-35441098	RPTEC	kidney:	n/a
14	chr6:35437101-35437151	AG09319	gingival:	n/a
15	chr6:35392246-35392296	HCF	heart:	n/a
16	chr6:35420754-35420804	SK-N-SH_RA	brain:	n/a
17	chr6:35436165-35436215	IMR90	lung:	fetal
18	chr6:35435693-35435743	PANC-1	pancreas:	n/a
19	chr6:35436165-35436215	HNPCEpiC	eye:	n/a
20	chr6:35419997-35420047	HMEC	breast:	n/a
21	chr6:35419979-35420029	NB4	blood:	n/a
22	chr6:35395209-35395259	HMEC	breast:	n/a
23	chr6:35436189-35436239	Hela-S3	cervix:	n/a
24	chr6:35392306-35392356	PrEC	prostate:	n/a
25	chr6:35392246-35392296	SK-N-MC	brain:	n/a
26	chr6:35435861-35435911	HCT-116	colon:	n/a
27	chr6:35418721-35418771	NHBE	bronchial:	n/a
28	chr6:35436792-35436842	HCM	heart:	n/a
29	chr6:35392736-35392786	NT2-D1	testis:	n/a
30	chr6:35442288-35442338	ProgFib	skin:	n/a
31	chr6:35436891-35436941	HepG2	liver:	n/a
32	chr6:35436136-35436186	IMR90	lung:	fetal
33	chr6:35392246-35392296	Hepatocyte	liver:	n/a
34	chr6:35435852-35435902	HepG2	liver:	n/a
35	chr6:35434728-35434778	HEK293	kidney:	embryo
36	chr6:35420303-35420353	SKMC	muscle:	n/a
37	chr6:35420754-35420804	AG09319	gingival:	n/a
38	chr6:35436189-35436239	SK-N-SH_RA	brain:	n/a
39	chr6:35392736-35392786	LNCaP	prostate:	n/a
40	chr6:35387204-35387254	NHBE	bronchial:	n/a
41	chr6:35436023-35436073	SK-N-MC	brain:	n/a
42	chr6:35420754-35420804	T-47D	breast:	n/a
43	chr6:35437101-35437151	GM12878	blood:	n/a
44	chr6:35436165-35436215	CMK	blood:	n/a
45	chr6:35403738-35403788	AoSMC	blood vessel:	n/a
46	chr6:35392736-35392786	SK-N-SH_RA	brain:	n/a
47	chr6:35436023-35436073	AoSMC	blood vessel:	n/a
48	chr6:35436023-35436073	Jurkat	blood:	n/a
49	chr6:35420754-35420804	Caco-2	colon:	n/a
50	chr6:35436159-35436209	H1-hESC	embryonic stem cell:	embryo

(count:183 , 50 per page) page: 1 2 3 4

No.	Distal block	Cell Line	Cell type
1	chr6:35309635..35310651-chr6:35382719..35383608,12	MCF-7	breast:
2	chr6:35419539..35422466-chr6:35438622..35441201,2	MCF-7	breast:
3	chr18:3261385..3261959-chr6:35436177..35436756,2	HCT-116	colon:
4	chr6:35384923..35387386-chr6:35435041..35437575,2	MCF-7	breast:
5	chr6:35385294..35388987-chr6:35389022..35393579,4	K562	blood:
6	chr6:35414374..35416172-chr6:35418455..35420674,2	K562	blood:
7	chr6:35419072..35421261-chr6:35429401..35431880,2	K562	blood:
8	chr6:35308378..35313609-chr6:35433550..35439145,12	K562	blood:
9	chr6:35237573..35240091-chr6:35439792..35442859,3	K562	blood:
10	chr18:45406363..45407026-chr6:35439781..35440543,2	Hela-S3	cervix:
11	chr6:35405229..35407792-chr6:35409420..35411171,2	MCF-7	breast:
12	chr10:114711341..114712330-chr6:35436015..35436846,2	Hela-S3	cervix:
13	chr6:35380537..35383478-chr6:35394277..35398227,3	K562	blood:
14	chr6:35259275..35263852-chr6:35441869..35446640,5	K562	blood:
15	chr6:35386287..35387905-chr6:35391814..35393487,2	MCF-7	breast:
16	chr6:35433822..35437754-chr6:35703135..35706478,6	K562	blood:
17	chr6:35259383..35261485-chr6:35435927..35437799,2	MCF-7	breast:
18	chr6:35260655..35262977-chr6:35418464..35420099,2	K562	blood:
19	chr6:35423275..35426107-chr6:35428625..35431307,2	MCF-7	breast:
20	chr6:35415017..35416617-chr6:35436362..35437925,2	MCF-7	breast:
21	chr6:35413046..35416291-chr6:35417429..35420462,4	K562	blood:
22	chr6:35419142..35422512-chr6:35424570..35429105,6	MCF-7	breast:
23	chr6:35259972..35262009-chr6:35419216..35421184,2	MCF-7	breast:
24	chr6:35436322..35437059-chr9:75766687..75767366,2	Hela-S3	cervix:
25	chr6:35227094..35229802-chr6:35433183..35436613,4	K562	blood:
26	chr6:35379744..35382549-chr6:35384456..35386159,2	K562	blood:
27	chr6:35418617..35424875-chr6:35434196..35438070,12	MCF-7	breast:
28	chr22:50356076..50356888-chr6:35439099..35439828,2	Hela-S3	cervix:
29	chr6:26045293..26047313-chr6:35435617..35437589,2	MCF-7	breast:
30	chr6:35435945..35437939-chr6:35694170..35698146,4	MCF-7	breast:
31	chr6:35264065..35266185-chr6:35435418..35437067,2	MCF-7	breast:
32	chr1:157015112..157015779-chr6:35419871..35420809,2	Hela-S3	cervix:
33	chr6:35417496..35419930-chr6:35463187..35465266,3	MCF-7	breast:
34	chr6:35395055..35396641-chr6:35399730..35402095,2	MCF-7	breast:
35	chr6:35374379..35377300-chr6:35379343..35382186,2	K562	blood:
36	chr6:35401564..35403389-chr6:35434322..35438039,3	K562	blood:
37	chr6:35415818..35424678-chr6:35432486..35440672,36	K562	blood:
38	chr6:35412651..35414194-chr6:35442637..35444257,2	MCF-7	breast:
39	chr6:35435616..35437664-chrX:153627963..153630833,2	K562	blood:
40	chr6:35385294..35388987-chr6:35389022..35393579,4	K562	blood:
41	chr6:35403150..35406143-chr6:35419979..35421585,2	MCF-7	breast:
42	chr20:45317919..45318811-chr6:35441135..35441693,2	Hela-S3	cervix:
43	chr6:35309118..35313462-chr6:35418133..35422102,7	MCF-7	breast:
44	chr6:35395055..35396641-chr6:35399730..35402095,2	MCF-7	breast:
45	chr6:35410705..35412521-chr6:35414398..35415976,2	MCF-7	breast:
46	chr6:35328136..35331103-chr6:35385311..35387478,2	MCF-7	breast:
47	chr6:35438538..35440763-chr6:35753826..35756739,2	K562	blood:
48	chr6:35429000..35431728-chr6:35441899..35443827,3	K562	blood:
49	chr6:35265049..35266094-chr6:35416870..35417859,12	K562	blood:
50	chr6:35389714..35392038-chr6:35454944..35457241,2	K562	blood:

(count:3 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-PPARD-2	chr6:35399993-35400219	NONHSAT112181
2	lnc-FANCE-1	chr6:35394662-35394997	NONHSAT112179
3	lnc-PPARD-1	chr6:35397970-35398533	NONHSAT112180

miRNA name	Chromosome Location	mirBase accession
hsa-miR-7111-5p	chr6:35438286-35438307	MIMAT0028119
hsa-miR-7111-3p	chr6:35438335-35438356	MIMAT0028120

No data

Variant related genes	Relation type
ENSG00000227154	TF binding region
RPL10A	TF binding region
FANCE	TF binding region
ENSG00000227154	CpG island
RPL10A	CpG island
FANCE	CpG island
ENSG00000110651	chromatin interactions
ENSG00000233547	chromatin interactions
ENSG00000198755	chromatin interactions
ENSG00000116560	chromatin interactions
ENSG00000260790	chromatin interactions
ENSG00000261652	chromatin interactions
ENSG00000104824	chromatin interactions
ENSG00000207165	chromatin interactions
ENSG00000096060	chromatin interactions
ENSG00000135046	chromatin interactions
ENSG00000204140	chromatin interactions
ENSG00000118680	chromatin interactions
ENSG00000122566	chromatin interactions
ENSG00000172315	chromatin interactions
ENSG00000064995	chromatin interactions
ENSG00000062716	chromatin interactions
ENSG00000232909	chromatin interactions
ENSG00000147403	chromatin interactions
ENSG00000108946	chromatin interactions
ENSG00000080546	chromatin interactions
ENSG00000157343	chromatin interactions
ENSG00000096063	chromatin interactions
ENSG00000264235	chromatin interactions
ENSG00000164808	chromatin interactions
ENSG00000123388	chromatin interactions
ENSG00000102547	chromatin interactions
ENSG00000260625	chromatin interactions
ENSG00000112039	chromatin interactions
ENSG00000183137	chromatin interactions
ENSG00000196532	chromatin interactions
ENSG00000260916	chromatin interactions
ENSG00000271784	chromatin interactions
ENSG00000196235	chromatin interactions
ENSG00000132694	chromatin interactions
ENSG00000140688	chromatin interactions
ENSG00000238184	chromatin interactions
ENSG00000090686	chromatin interactions
ENSG00000261717	chromatin interactions
ENSG00000112033	chromatin interactions
ENSG00000064999	chromatin interactions
ENSG00000131469	chromatin interactions
ENSG00000260068	chromatin interactions
ENSG00000166822	chromatin interactions
ENSG00000065029	chromatin interactions
ENSG00000166971	chromatin interactions
ENSG00000227154	chromatin interactions
ENSG00000023892	chromatin interactions
ENSG00000187837	chromatin interactions
ENSG00000105193	chromatin interactions
ENSG00000117335	chromatin interactions
ENSG00000204568	chromatin interactions
ENSG00000140743	chromatin interactions
ENSG00000134186	chromatin interactions
ENSG00000007866	chromatin interactions

Extended variants
information (count: 2858 )
Associated
traits (count: 105 )

Variant overlapped rSNPs/rCNVs (count:2858 , 50 per page) page: 1 2 3 4 5 6 7 ... 58

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs2016520	chr6:35378778-35378779	Strong transcription Genic enhancers Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3'	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs9658134	chr6:35378798-35378799	Strong transcription Genic enhancers Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3'	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
3	rs201208157	chr6:35378811-35378812	Strong transcription Genic enhancers Weak transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
4	rs140654709	chr6:35378812-35378813	Strong transcription Genic enhancers Weak transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
5	rs201971336	chr6:35378844-35378845	Strong transcription Genic enhancers Weak transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
6	rs532299968	chr6:35378849-35378850	Strong transcription Genic enhancers Weak transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
7	rs373903534	chr6:35378850-35378851	Strong transcription Genic enhancers Weak transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
8	rs200600159	chr6:35378898-35378899	Strong transcription Genic enhancers Weak transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
9	rs201482797	chr6:35378899-35378900	Strong transcription Genic enhancers Weak transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
10	rs144940143	chr6:35378930-35378931	Strong transcription Genic enhancers Weak transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
11	rs202017798	chr6:35378936-35378937	Strong transcription Genic enhancers Weak transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
12	rs546984488	chr6:35378946-35378947	Strong transcription Genic enhancers Weak transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
13	rs149040923	chr6:35378953-35378954	Strong transcription Genic enhancers Weak transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
14	rs144202664	chr6:35378969-35378970	Strong transcription Genic enhancers Weak transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
15	rs9658135	chr6:35378997-35378998	Strong transcription Genic enhancers Weak transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
16	rs201297022	chr6:35379007-35379008	Strong transcription Weak transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
17	rs199826149	chr6:35379008-35379009	Strong transcription Weak transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
18	rs201567460	chr6:35379021-35379022	Strong transcription Weak transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
19	rs567822200	chr6:35379022-35379023	Strong transcription Weak transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
20	rs200790838	chr6:35379029-35379030	Strong transcription Weak transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
21	rs201525969	chr6:35379033-35379034	Strong transcription Weak transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
22	rs375154689	chr6:35379088-35379089	Strong transcription Weak transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
23	rs538459093	chr6:35379120-35379121	Strong transcription Weak transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
24	rs556832493	chr6:35379183-35379184	Strong transcription Weak transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
25	rs578244795	chr6:35379193-35379194	Strong transcription Weak transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
26	rs184387886	chr6:35379200-35379201	Strong transcription Weak transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
27	rs554127294	chr6:35379207-35379208	Strong transcription Weak transcription Enhancers Genic enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
28	rs373224156	chr6:35379235-35379236	Strong transcription Weak transcription Enhancers Genic enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
29	rs75330807	chr6:35379254-35379255	Strong transcription Weak transcription Enhancers Genic enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
30	rs9658136	chr6:35379346-35379347	Strong transcription Weak transcription Enhancers Genic enhancers Transcr. at gene 5' and 3'	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
31	rs148218937	chr6:35379396-35379397	Strong transcription Weak transcription Enhancers Genic enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
32	rs543189338	chr6:35379400-35379401	Strong transcription Weak transcription Enhancers Genic enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
33	rs564783996	chr6:35379436-35379437	Strong transcription Weak transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs532261748	chr6:35379452-35379453	Strong transcription Weak transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs538329377	chr6:35379528-35379529	Strong transcription Weak transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs558633093	chr6:35379535-35379536	Strong transcription Weak transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs189873461	chr6:35379543-35379544	Strong transcription Weak transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs9658137	chr6:35379555-35379556	Strong transcription Weak transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs9658138	chr6:35379571-35379572	Strong transcription Weak transcription Genic enhancers Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
40	rs548235245	chr6:35379618-35379619	Strong transcription Weak transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs565718805	chr6:35379622-35379623	Strong transcription Weak transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs376070786	chr6:35379623-35379624	Strong transcription Weak transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs534844660	chr6:35379630-35379631	Strong transcription Weak transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs569638043	chr6:35379636-35379637	Strong transcription Weak transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs35954971	chr6:35379694-35379695	Strong transcription Weak transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs9658139	chr6:35379718-35379719	Strong transcription Weak transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs9296151	chr6:35379770-35379771	Strong transcription Weak transcription Genic enhancers Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
48	rs571910188	chr6:35379867-35379868	Strong transcription Weak transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs539298757	chr6:35379880-35379881	Strong transcription Weak transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs181721225	chr6:35379932-35379933	Strong transcription Weak transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:105)

Disease	PMID	Source
Follicular lymphoma	20505157	CNVD
Glioblastoma multiforme	21080181	CNVD
Ewing''s sarcoma	21437220	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Leukemia	21518781	CNVD
Cancer	21637783	CNVD
Facial dysmorphism	22105932	CNVD
Medulloblastoma	21979893	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Endometrial cancer	22040021	CNVD
Acute myeloid leukemia	16864856	CNVD
Breast cancer	21264507	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	16751803	CNVD
Bladder cancer	19088036	CNVD
Wilms tumour	21544195	CNVD
Uveal melanoma	21693616	CNVD
Biliary cancer	19435499	CNVD
Malaria	21533027	CNVD
Retinoblastoma	19183342	CNVD
Acute myeloid leukemia	20729466	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	21858162	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	21448237	CNVD
Melanoma	18172304	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Hepatocellular carcinoma	16750200	CNVD
Autism	22495311	CNVD
Cancer	16790693	CNVD
Cervical cancer	21062161	CNVD
Esophageal adenocarcinoma	18820669	CNVD
Systemic lupus erythematosus	17503323	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Urothelial carcinoma	18382360	CNVD
Cancer	21183584	CNVD
Hodgkin''s lymphoma	17606441	CNVD
small cell lung cancer	20016488	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Gastric cancer	17908304	CNVD
Metanephric adenoma	20802469	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Schizophrenia	19571808	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Neuroblastoma	16790693	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Breast cancer	16397240	CNVD
Retinoblastoma	22278416	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Systemic lupus erythematosus	20877625	CNVD
Cleidocranial dysplasia	18696259	CNVD
Holoprosencephaly	21359414	CNVD
Liposarcoma	21253554	CNVD
Uveal melanoma	20484589	CNVD
Fibroblasts	20926602	CNVD
Systemic lupus erythematosus	19279649	CNVD
Retinoblastoma	16790693	CNVD
Acute myocardial infarction	18032375	CNVD
Renal cell carcinoma	19150565	CNVD
Systemic lupus erythematosus	19591781	CNVD
Attention deficit hyperactivity disorder	19287146	CNVD
Autism	19287146	CNVD
Erythema nodosum in leprosy	19287146	CNVD
Henoch-schoenlein purpura	19287146	CNVD
Liver cirrhosis	19287146	CNVD
Systemic lupus erythematosus	19287146	CNVD
Autoimmune disease	19135723	CNVD
Congenital adrenal hyperplasia	18478071	CNVD
Systemic lupus erythematosus	19287147	CNVD
Osteosarcoma	16790693	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Cancer	22183965	CNVD
Melanoma	22183965	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Lung cancer	18438408	CNVD
Glioblastoma multiforme	21138945	CNVD
Breast cancer	21364760	CNVD
Basal cell lymphoma	19029149	CNVD
Diffuse large b-cell lymphoma	19029149	CNVD
Myelofibrosis	22110671	CNVD
Liver carcinoma	19366792	CNVD
Chronic lymphocytic leukemia	22228453	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:3429 , 50 per page) page: 1 2 3 4 5 6 7 ... 69

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:35359800-35378800	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
2	chr6:35360000-35379000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
3	chr6:35360000-35382600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
4	chr6:35361000-35378800	Weak transcription	Psoas Muscle	Psoas
5	chr6:35361800-35385800	Weak transcription	Small Intestine	intestine
6	chr6:35362200-35380000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
7	chr6:35366200-35386800	Weak transcription	H9 Cell Line	embryonic stem cell
8	chr6:35366400-35382800	Weak transcription	HUES6 Cell Line	embryonic stem cell
9	chr6:35369200-35378800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
10	chr6:35369200-35379000	Weak transcription	Muscle Satellite Cultured Cells	--
11	chr6:35369200-35382600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
12	chr6:35369400-35382600	Weak transcription	NH-A	brain
13	chr6:35370600-35393200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
14	chr6:35371000-35378800	Weak transcription	Duodenum Mucosa	Duodenum
15	chr6:35371000-35382400	Weak transcription	Right Atrium	heart
16	chr6:35371200-35378800	Weak transcription	Placenta Amnion	Placenta Amnion
17	chr6:35371200-35382400	Weak transcription	Pancreatic Islets	Pancreatic Islet
18	chr6:35371200-35382400	Weak transcription	Stomach Mucosa	stomach
19	chr6:35371200-35383200	Weak transcription	Fetal Kidney	kidney
20	chr6:35372000-35382400	Weak transcription	Fetal Heart	heart
21	chr6:35373200-35381400	Weak transcription	Fetal Brain Male	brain
22	chr6:35373400-35382400	Weak transcription	Brain Germinal Matrix	brain
23	chr6:35374000-35380400	Genic enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
24	chr6:35375200-35378800	Weak transcription	Right Ventricle	heart
25	chr6:35375200-35382600	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
26	chr6:35375600-35387000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
27	chr6:35376000-35380000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
28	chr6:35376400-35378800	Weak transcription	Brain Angular Gyrus	brain
29	chr6:35376400-35379000	Weak transcription	HMEC	breast
30	chr6:35376400-35379000	Weak transcription	HSMM	muscle
31	chr6:35376400-35379000	Strong transcription	NHEK	skin
32	chr6:35376400-35379200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
33	chr6:35377000-35378800	Weak transcription	Dnd41	blood
34	chr6:35377000-35379000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
35	chr6:35377400-35379000	Genic enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
36	chr6:35377400-35379000	Weak transcription	Fetal Brain Female	brain
37	chr6:35377400-35379200	Weak transcription	HUES64 Cell Line	embryonic stem cell
38	chr6:35377400-35379200	Weak transcription	Fetal Lung	lung
39	chr6:35377600-35379200	Genic enhancers	Placenta	Placenta
40	chr6:35377600-35380200	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
41	chr6:35377600-35381200	Strong transcription	Liver	Liver
42	chr6:35377600-35382400	Strong transcription	Fetal Muscle Leg	muscle
43	chr6:35377600-35382400	Strong transcription	Osteobl	bone
44	chr6:35377600-35386000	Weak transcription	HUVEC	blood vessel
45	chr6:35377800-35385600	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
46	chr6:35377800-35395000	Weak transcription	K562	blood
47	chr6:35378000-35378800	Strong transcription	Foreskin Fibroblast Primary Cells skin02	Skin
48	chr6:35378000-35379200	Enhancers	Primary T helper naive cells from peripheral blood	blood
49	chr6:35378000-35379600	Enhancers	Primary T killer naive cells fromperipheralblood	blood
50	chr6:35378000-35380000	Genic enhancers	Primary T helper cells fromperipheralblood	blood

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