Variant report

Variant	nsv885815
Chromosome Location	chr6:36915906-36979583
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr6:36953849-36954297	HepG2	liver:	n/a	n/a
2	ARID3A	chr6:36953882-36954358	K562	blood:	n/a	n/a
3	ARID3A	chr6:36921134-36921148	K562	blood:	n/a	n/a
4	ARID3A	chr6:36921881-36922254	K562	blood:	n/a	n/a
5	ARID3A	chr6:36952751-36952758	HepG2	liver:	n/a	n/a
6	ATF1	chr6:36921885-36922333	K562	blood:	n/a	n/a
7	ATF1	chr6:36953805-36954407	K562	blood:	n/a	n/a
8	ATF2	chr6:36952366-36953109	H1-hESC	embryonic stem cell:	n/a	n/a
9	ATF2	chr6:36972239-36972765	GM12878	blood:	n/a	n/a
10	ATF2	chr6:36975311-36976028	GM12878	blood:	n/a	n/a
11	ATF2	chr6:36953752-36954392	GM12878	blood:	n/a	n/a
12	ATF3	chr6:36921849-36922293	K562	blood:	n/a	n/a
13	ATF3	chr6:36953708-36954161	H1-hESC	embryonic stem cell:	n/a	chr6:36954012-36954021 chr6:36953976-36953996 chr6:36953976-36953985
14	ATF3	chr6:36953729-36954147	H1-hESC	embryonic stem cell:	n/a	chr6:36954012-36954021 chr6:36953976-36953996 chr6:36953976-36953985
15	ATF3	chr6:36927060-36927323	K562	blood:	n/a	n/a
16	ATF3	chr6:36954222-36954583	K562	blood:	n/a	chr6:36954234-36954243
17	ATF3	chr6:36928277-36928729	K562	blood:	n/a	n/a
18	ATF3	chr6:36953709-36954310	HepG2	liver:	n/a	chr6:36954012-36954021 chr6:36953976-36953996 chr6:36953976-36953985 chr6:36954234-36954243
19	ATF3	chr6:36953708-36954212	GM12878	blood:	n/a	chr6:36954012-36954021 chr6:36953976-36953996 chr6:36953976-36953985
20	ATF3	chr6:36928406-36928624	K562	blood:	n/a	n/a
21	ATF3	chr6:36953834-36954138	K562	blood:	n/a	chr6:36954012-36954021 chr6:36953976-36953996 chr6:36953976-36953985
22	ATF3	chr6:36953716-36954157	K562	blood:	n/a	chr6:36954012-36954021 chr6:36953976-36953996 chr6:36953976-36953985
23	ATF3	chr6:36953764-36954186	HepG2	liver:	n/a	chr6:36953976-36953996 chr6:36953976-36953985 chr6:36954012-36954021
24	ATF3	chr6:36953783-36954204	K562	blood:	n/a	chr6:36954012-36954021 chr6:36953976-36953996 chr6:36953976-36953985
25	ATF3	chr6:36953803-36954026	GM12878	blood:	n/a	chr6:36954012-36954021 chr6:36953976-36953996 chr6:36953976-36953985
26	BACH1	chr6:36953937-36954469	H1-hESC	embryonic stem cell:	n/a	n/a
27	BACH1	chr6:36927024-36927224	H1-hESC	embryonic stem cell:	n/a	n/a
28	BACH1	chr6:36948845-36949027	H1-hESC	embryonic stem cell:	n/a	n/a
29	BCL3	chr6:36917435-36917755	GM12878	blood:	n/a	n/a
30	BCLAF1	chr6:36973184-36973691	GM12878	blood:	n/a	n/a
31	BCLAF1	chr6:36953697-36954586	K562	blood:	n/a	chr6:36954128-36954141 chr6:36954177-36954185 chr6:36954182-36954195 chr6:36954152-36954165 chr6:36954188-36954201 chr6:36954016-36954029
32	BCLAF1	chr6:36953567-36954167	GM12878	blood:	n/a	chr6:36954128-36954141 chr6:36954152-36954165 chr6:36954016-36954029
33	BHLHE40	chr6:36975123-36975848	GM12878	blood:	n/a	n/a
34	BHLHE40	chr6:36973353-36973682	K562	blood:	n/a	n/a
35	BHLHE40	chr6:36928341-36928752	K562	blood:	n/a	n/a
36	BHLHE40	chr6:36954760-36954955	GM12878	blood:	n/a	n/a
37	BHLHE40	chr6:36953594-36955050	HepG2	liver:	n/a	chr6:36954127-36954143 chr6:36953970-36953991 chr6:36953977-36953986 chr6:36953976-36953985 chr6:36954542-36954558 chr6:36954191-36954207 chr6:36953974-36953987 chr6:36953976-36953985 chr6:36953975-36953984
38	BHLHE40	chr6:36953726-36954528	GM12878	blood:	n/a	chr6:36954127-36954143 chr6:36953970-36953991 chr6:36953977-36953986 chr6:36953976-36953985 chr6:36954191-36954207 chr6:36953974-36953987 chr6:36953976-36953985 chr6:36953975-36953984
39	BHLHE40	chr6:36953810-36954036	HepG2	liver:	n/a	chr6:36953970-36953991 chr6:36953977-36953986 chr6:36953976-36953985 chr6:36953974-36953987 chr6:36953976-36953985 chr6:36953975-36953984
40	BHLHE40	chr6:36953686-36955044	K562	blood:	n/a	chr6:36954127-36954143 chr6:36953970-36953991 chr6:36953977-36953986 chr6:36953976-36953985 chr6:36954542-36954558 chr6:36954191-36954207 chr6:36953974-36953987 chr6:36953976-36953985 chr6:36953975-36953984
41	BHLHE40	chr6:36952725-36953145	GM12878	blood:	n/a	n/a
42	BHLHE40	chr6:36972439-36972669	GM12878	blood:	n/a	n/a
43	BHLHE40	chr6:36927035-36927280	K562	blood:	n/a	n/a
44	BHLHE40	chr6:36973273-36973560	GM12878	blood:	n/a	n/a
45	BHLHE40	chr6:36967394-36967480	K562	blood:	n/a	n/a
46	BHLHE40	chr6:36971830-36972133	GM12878	blood:	n/a	n/a
47	BHLHE40	chr6:36953805-36954235	A549	lung:	n/a	chr6:36954127-36954143 chr6:36953970-36953991 chr6:36953977-36953986 chr6:36953976-36953985 chr6:36954191-36954207 chr6:36953974-36953987 chr6:36953976-36953985 chr6:36953975-36953984
48	BHLHE40	chr6:36921873-36922370	K562	blood:	n/a	n/a
49	BRCA1	chr6:36972329-36972426	GM12878	blood:	n/a	n/a
50	BRCA1	chr6:36953704-36954301	GM12878	blood:	n/a	n/a

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:36926947-36926997	SK-N-SH_RA	brain:	n/a
2	chr6:36954133-36954183	NT2-D1	testis:	n/a
3	chr6:36934311-36934361	HUVEC	blood vessel:	n/a
4	chr6:36927100-36927150	HRCEpiC	kidney:	n/a
5	chr6:36926947-36926997	IMR90	lung:	fetal
6	chr6:36954170-36954220	NT2-D1	testis:	n/a
7	chr6:36926947-36926997	AG09319	gingival:	n/a
8	chr6:36926947-36926997	SK-N-SH_RA	brain:	n/a
9	chr6:36954133-36954183	NT2-D1	testis:	n/a
10	chr6:36934311-36934361	HUVEC	blood vessel:	n/a
11	chr6:36927100-36927150	HRCEpiC	kidney:	n/a
12	chr6:36926947-36926997	IMR90	lung:	fetal
13	chr6:36954170-36954220	NT2-D1	testis:	n/a
14	chr6:36926947-36926997	AG09319	gingival:	n/a
15	chr6:36954133-36954183	HRCEpiC	kidney:	n/a
16	chr6:36973448-36973498	RPTEC	kidney:	n/a
17	chr6:36972163-36972213	PANC-1	pancreas:	n/a
18	chr6:36929190-36929240	HEK293	kidney:	embryo
19	chr6:36954249-36954299	HCT-116	colon:	n/a
20	chr6:36954695-36954745	Jurkat	blood:	n/a
21	chr6:36930062-36930112	AG09319	gingival:	n/a
22	chr6:36954138-36954188	CMK	blood:	n/a
23	chr6:36926828-36926878	Caco-2	colon:	n/a
24	chr6:36972163-36972213	GM19239	blood:	n/a
25	chr6:36956891-36956941	PANC-1	pancreas:	n/a
26	chr6:36954695-36954745	HCM	heart:	n/a
27	chr6:36972027-36972077	AG09319	gingival:	n/a
28	chr6:36930021-36930071	H1-hESC	embryonic stem cell:	embryo
29	chr6:36926947-36926997	HMEC	breast:	n/a
30	chr6:36935591-36935641	HNPCEpiC	eye:	n/a
31	chr6:36928572-36928622	NHBE	bronchial:	n/a
32	chr6:36953694-36953744	GM12891	blood:	n/a
33	chr6:36953962-36954012	Hela-S3	cervix:	n/a
34	chr6:36954133-36954183	HCF	heart:	n/a
35	chr6:36972027-36972077	CMK	blood:	n/a
36	chr6:36951411-36951461	HCPEpiC	choroid plexus:	n/a
37	chr6:36936560-36936610	SKMC	muscle:	n/a
38	chr6:36953962-36954012	ovcar-3	ovarian:	n/a
39	chr6:36972127-36972177	PrEC	prostate:	n/a
40	chr6:36951411-36951461	U87	brain:	n/a
41	chr6:36972027-36972077	HPAEpiC	pulmonary alveolar:	n/a
42	chr6:36947277-36947327	HepG2	liver:	n/a
43	chr6:36972163-36972213	PrEC	prostate:	n/a
44	chr6:36973448-36973498	BJ	skin:	n/a
45	chr6:36930062-36930112	AG10803	skin:	n/a
46	chr6:36973518-36973568	GM12891	blood:	n/a
47	chr6:36948816-36948866	SAEC	small airway:	n/a
48	chr6:36922415-36922465	GM06990	blood:	n/a
49	chr6:36926947-36926997	HCF	heart:	n/a
50	chr6:36922415-36922465	NHBE	bronchial:	n/a

No.	Distal block	Cell Line	Cell type
1	chr5:179233344..179233858-chr6:36953828..36954636,2	Hela-S3	cervix:
2	chr6:36936791..36939065-chr6:36954271..36955828,2	MCF-7	breast:
3	chr6:36911927..36913902-chr6:36952339..36954357,2	MCF-7	breast:
4	chr6:36959704..36962585-chr6:36968931..36971107,3	K562	blood:
5	chr6:36929829..36933522-chr6:36953197..36956380,5	MCF-7	breast:
6	chr6:36920733..36923639-chr6:36925448..36929945,7	K562	blood:
7	chr6:36951360..36957548-chr6:36964706..36970928,10	K562	blood:
8	chr6:36924148..36928087-chr6:36953132..36955395,4	MCF-7	breast:
9	chr6:36954231..36957100-chr6:36969352..36972549,3	K562	blood:
10	chr6:36930754..36936310-chr6:36950773..36956274,7	MCF-7	breast:
11	chr6:36960761..36964631-chr6:36974795..36978853,3	MCF-7	breast:
12	chr6:36886112..36887958-chr6:36978149..36979897,2	MCF-7	breast:
13	chr6:36915747..36919680-chr6:36919787..36923449,3	K562	blood:
14	chr6:36928176..36930778-chr6:36931482..36933887,2	MCF-7	breast:
15	chr6:36852677..36854280-chr6:36961747..36964273,2	K562	blood:
16	chr6:36977300..36979509-chr6:36984947..36986503,2	K562	blood:
17	chr6:36949230..36952224-chr6:37136925..37139369,2	K562	blood:
18	chr6:36942964..36945268-chr6:37137836..37139724,2	K562	blood:
19	chr6:36882074..36882765-chr6:36946753..36947291,2	MCF-7	breast:
20	chr6:36927877..36929590-chr6:36935143..36936751,2	MCF-7	breast:
21	chr6:36903375..36906327-chr6:36934903..36936989,2	MCF-7	breast:
22	chr6:36943380..36943959-chr6:36986086..36986598,2	MCF-7	breast:
23	chr6:36905749..36908241-chr6:36957017..36958838,2	K562	blood:
24	chr6:36939940..36941614-chr6:36949156..36950933,2	MCF-7	breast:
25	chr6:36851693..36853649-chr6:36966892..36968803,2	MCF-7	breast:
26	chr6:36976679..36978826-chr6:37225784..37227399,2	K562	blood:
27	chr6:36838369..36843263-chr6:36951921..36955568,5	MCF-7	breast:
28	chr6:36853681..36855481-chr6:36934818..36937310,2	K562	blood:
29	chr6:36921663..36923883-chr6:36924908..36926432,2	MCF-7	breast:
30	chr6:36951556..36954050-chr6:36967032..36970466,4	K562	blood:
31	chr6:36944786..36946944-chr6:36988246..36989759,2	MCF-7	breast:
32	chr6:36561584..36563964-chr6:36951421..36953213,2	MCF-7	breast:
33	chr6:36928588..36930558-chr6:36986253..36988587,2	K562	blood:
34	chr6:36953981..36954715-chr9:94185943..94186578,2	Hela-S3	cervix:
35	chr6:36970572..36972473-chr6:36980077..36981597,2	MCF-7	breast:
36	chr6:36962998..36965678-chr6:36969207..36971647,3	K562	blood:
37	chr6:36952261..36954341-chr6:37137585..37140214,3	K562	blood:
38	chr17:7760801..7761678-chr6:36953555..36954417,2	Hela-S3	cervix:
39	chr6:36571817..36573634-chr6:36968977..36971484,2	K562	blood:
40	chr6:36937337..36939324-chr6:36946513..36949209,3	MCF-7	breast:
41	chr6:36881755..36882648-chr6:36946922..36947744,2	MCF-7	breast:
42	chr6:36724390..36726745-chr6:36953555..36956553,2	K562	blood:
43	chr6:36929829..36933522-chr6:36953197..36956380,5	MCF-7	breast:
44	chr6:36953075..36956165-chr6:36961962..36964625,3	MCF-7	breast:
45	chr6:36938832..36941814-chr6:36942476..36945654,4	MCF-7	breast:
46	chr6:36921333..36923898-chr6:36932868..36934927,2	K562	blood:
47	chr19:55918204..55919099-chr6:36954269..36955029,2	Hela-S3	cervix:
48	chr6:36952431..36954730-chr6:36980411..36983158,3	MCF-7	breast:
49	chr6:36852138..36856054-chr6:36953606..36956862,5	K562	blood:
50	chr6:36926514..36929766-chr6:36952495..36955671,4	MCF-7	breast:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-PPIL1-2	chr6:36937832-36937890	NONHSAT112245
2	lnc-MTCH1-1	chr6:36924199-36924378	ucscGeneNc_uc003omt_1
3	lnc-C6orf89-3	chr6:36932162-36932443	NONHSAT112243
4	lnc-PPIL1-2	chr6:36938182-36938470	NONHSAT112245
5	lnc-C6orf89-3	chr6:36930766-36930809	NONHSAT112243
6	lnc-C6orf89-3	chr6:36931599-36931738	NONHSAT112243
7	lnc-MTCH1-1	chr6:36915528-36916894	ucscGeneNc_uc003omt_1
8	lnc-FGD2-1	chr6:36976610-36977807	NONHSAT112246
9	lnc-MTCH1-1	chr6:36919589-36919685	ucscGeneNc_uc003omt_1
10	lnc-FGD2-1	chr6:36973422-36973661	NONHSAT112246
11	lnc-MTCH1-1	chr6:36917155-36917266	ucscGeneNc_uc003omt_1
12	lnc-MTCH1-1	chr6:36918721-36918844	ucscGeneNc_uc003omt_1
13	lnc-PPIL1-2	chr6:36940428-36940452	NONHSAT112245

Variant related genes	Relation type
MTCH1	TF binding region
PI16	TF binding region
FGD2	TF binding region
ENSG00000232598	TF binding region
MTCH1	CpG island
PI16	CpG island
FGD2	CpG island
ENSG00000232598	CpG island
ENSG00000124772	chromatin interactions
ENSG00000164530	chromatin interactions
ENSG00000168209	chromatin interactions
ENSG00000146192	chromatin interactions
ENSG00000161013	chromatin interactions
ENSG00000198663	chromatin interactions
ENSG00000161011	chromatin interactions
ENSG00000137168	chromatin interactions
ENSG00000112081	chromatin interactions
ENSG00000182224	chromatin interactions
ENSG00000137449	chromatin interactions
ENSG00000111229	chromatin interactions
ENSG00000256268	chromatin interactions
ENSG00000100116	chromatin interactions
ENSG00000108106	chromatin interactions
ENSG00000172738	chromatin interactions
ENSG00000137409	chromatin interactions
ENSG00000137193	chromatin interactions
ENSG00000232598	chromatin interactions
ENSG00000165030	chromatin interactions
ENSG00000183011	chromatin interactions
ENSG00000137200	chromatin interactions
ENSG00000162783	chromatin interactions

Extended variants
information (count: 2829 )
Associated
traits (count: 92 )

Variant overlapped rSNPs/rCNVs (count:2829 , 50 per page) page: 1 2 3 4 5 6 7 ... 57

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs7740320	chr6:36915906-36915907	Enhancers Flanking Active TSS Bivalent Enhancer Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs11450091	chr6:36915923-36915924	Enhancers Flanking Active TSS Bivalent Enhancer Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
3	rs539574854	chr6:36915934-36915935	Enhancers Flanking Active TSS Bivalent Enhancer Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
4	rs74467740	chr6:36915953-36915954	Enhancers Flanking Active TSS Bivalent Enhancer Weak transcription	TF binding region Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
5	rs1023037	chr6:36915954-36915955	Enhancers Flanking Active TSS Bivalent Enhancer Weak transcription	TF binding region Chromatin interactive region lncRNA	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
6	rs138628799	chr6:36915965-36915966	Enhancers Flanking Active TSS Bivalent Enhancer Weak transcription	TF binding region Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
7	rs113514271	chr6:36915972-36915973	Enhancers Flanking Active TSS Bivalent Enhancer Weak transcription	TF binding region Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
8	rs567238029	chr6:36916008-36916009	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS	TF binding region Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
9	rs575574279	chr6:36916014-36916015	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS	TF binding region Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
10	rs191842364	chr6:36916016-36916017	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS	TF binding region Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
11	rs4711475	chr6:36916019-36916020	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS	TF binding region Chromatin interactive region lncRNA	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
12	rs7740478	chr6:36916041-36916042	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS	TF binding region Chromatin interactive region lncRNA	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
13	rs552001325	chr6:36916043-36916044	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS	TF binding region Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
14	rs4714025	chr6:36916099-36916100	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS	TF binding region Chromatin interactive region lncRNA	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
15	rs538949554	chr6:36916102-36916103	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
16	rs147980830	chr6:36916130-36916131	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS	CpG island Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
17	rs183256540	chr6:36916131-36916132	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS	CpG island Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
18	rs568350039	chr6:36916202-36916203	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
19	rs75957637	chr6:36916236-36916237	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
20	rs550927726	chr6:36916246-36916247	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
21	rs7759265	chr6:36916277-36916278	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS	Chromatin interactive region lncRNA	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
22	rs539884050	chr6:36916294-36916295	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
23	rs369748282	chr6:36916349-36916350	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
24	rs201798988	chr6:36916379-36916380	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
25	rs553055842	chr6:36916394-36916395	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
26	rs112113561	chr6:36916403-36916404	Weak transcription Enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
27	rs376605611	chr6:36916405-36916406	Weak transcription Enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
28	rs112518785	chr6:36916409-36916410	Weak transcription Enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
29	rs113365957	chr6:36916410-36916411	Weak transcription Enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
30	rs113334587	chr6:36916430-36916431	Weak transcription Enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
31	rs13207217	chr6:36916432-36916433	Weak transcription Enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
32	rs145525936	chr6:36916435-36916436	Weak transcription Enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
33	rs140233175	chr6:36916438-36916439	Weak transcription Enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
34	rs138879166	chr6:36916439-36916440	Weak transcription Enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
35	rs144207148	chr6:36916443-36916444	Weak transcription Enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
36	rs62406497	chr6:36916449-36916450	Weak transcription Enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
37	rs138767404	chr6:36916453-36916454	Weak transcription Enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
38	rs13193199	chr6:36916479-36916480	Weak transcription Enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
39	rs529311143	chr6:36916488-36916489	Weak transcription Enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
40	rs147076815	chr6:36916495-36916496	Weak transcription Enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
41	rs142273965	chr6:36916496-36916497	Weak transcription Enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
42	rs139570820	chr6:36916497-36916498	Weak transcription Enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
43	rs370394801	chr6:36916507-36916508	Weak transcription Enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
44	rs569288937	chr6:36916528-36916529	Weak transcription Enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
45	rs187786611	chr6:36916551-36916552	Weak transcription Enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
46	rs555575933	chr6:36916632-36916633	Weak transcription Enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
47	rs141651119	chr6:36916656-36916657	Weak transcription Enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
48	rs560767409	chr6:36916659-36916660	Weak transcription Enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
49	rs556880897	chr6:36916678-36916679	Weak transcription Enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
50	rs576771282	chr6:36916680-36916681	Weak transcription Enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:92)

Disease	PMID	Source
Follicular lymphoma	20505157	CNVD
Glioblastoma multiforme	21080181	CNVD
Ewing''s sarcoma	21437220	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Leukemia	21518781	CNVD
Cancer	21637783	CNVD
Facial dysmorphism	22105932	CNVD
Medulloblastoma	21979893	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Endometrial cancer	22040021	CNVD
Acute myeloid leukemia	16864856	CNVD
Breast cancer	21264507	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	16751803	CNVD
Bladder cancer	19088036	CNVD
Wilms tumour	21544195	CNVD
Uveal melanoma	21693616	CNVD
Biliary cancer	19435499	CNVD
Malaria	21533027	CNVD
Retinoblastoma	19183342	CNVD
Acute myeloid leukemia	20729466	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	21858162	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	21448237	CNVD
Melanoma	18172304	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Hepatocellular carcinoma	16750200	CNVD
Autism	22495311	CNVD
Cancer	16790693	CNVD
Cervical cancer	21062161	CNVD
Systemic lupus erythematosus	17503323	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Urothelial carcinoma	18382360	CNVD
Cancer	21183584	CNVD
Hodgkin''s lymphoma	17606441	CNVD
small cell lung cancer	20016488	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Gastric cancer	17908304	CNVD
Metanephric adenoma	20802469	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Neuroblastoma	16790693	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Cleidocranial dysplasia	18696259	CNVD
Holoprosencephaly	21359414	CNVD
Liposarcoma	21253554	CNVD
Uveal melanoma	20484589	CNVD
Fibroblasts	20926602	CNVD
Osteosarcoma	16790693	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Cancer	22183965	CNVD
Melanoma	22183965	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Lung cancer	18438408	CNVD
Glioblastoma multiforme	21138945	CNVD
Breast cancer	21364760	CNVD
Chronic lymphocytic leukemia	22228453	CNVD
Lung cancer	19153074	CNVD
Ovarian cancer	21720365	CNVD
Melanoma	21693616	CNVD
Myelofibrosis	22110671	CNVD
Mental retardation	21062444	CNVD
Breast cancer	16397240	CNVD
Barrett''s adenocarcinoma	18663352	CNVD
Osteosarcoma	21197465	CNVD
Gastric cancer	24379144	CNVD
Neuroblastoma	18923191	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Cancer	20164919	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD

Chromatin state (count:2401 , 50 per page) page: 1 2 3 4 5 6 7 ... 49

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:36898600-36922200	Weak transcription	Right Atrium	heart
2	chr6:36910800-36916000	Weak transcription	Hela-S3	cervix
3	chr6:36913200-36917000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
4	chr6:36913800-36916000	Enhancers	Fetal Thymus	thymus
5	chr6:36914200-36916600	Enhancers	Primary T cells from cord blood	blood
6	chr6:36914200-36916600	Enhancers	Dnd41	blood
7	chr6:36914200-36916800	Enhancers	Primary T regulatory cells fromperipheralblood	blood
8	chr6:36914400-36916200	Enhancers	Primary T helper naive cells from peripheral blood	blood
9	chr6:36914400-36916200	Enhancers	Primary T helper cells PMA-I stimulated	--
10	chr6:36914400-36916400	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
11	chr6:36914400-36916400	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
12	chr6:36914400-36917200	Enhancers	Primary T cells fromperipheralblood	blood
13	chr6:36914600-36916000	Enhancers	Primary hematopoietic stem cells short term culture	blood
14	chr6:36915000-36916200	Enhancers	Brain Hippocampus Middle	brain
15	chr6:36915000-36916400	Enhancers	Primary T killer naive cells fromperipheralblood	blood
16	chr6:36915000-36916600	Enhancers	Primary B cells from cord blood	blood
17	chr6:36915200-36916200	Enhancers	Brain Anterior Caudate	brain
18	chr6:36915200-36916400	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
19	chr6:36915200-36917000	Enhancers	Primary B cells from peripheral blood	blood
20	chr6:36915400-36916000	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
21	chr6:36915400-36916000	Bivalent Enhancer	Primary hematopoietic stem cells G-CSF-mobilized Male	--
22	chr6:36915400-36916000	Flanking Active TSS	Brain Inferior Temporal Lobe	brain
23	chr6:36915400-36916200	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
24	chr6:36915400-36916200	Flanking Active TSS	Primary T helper 17 cells PMA-I stimulated	--
25	chr6:36915400-36916200	Enhancers	Primary T killer memory cells from peripheral blood	blood
26	chr6:36915400-36916200	Enhancers	HMEC	breast
27	chr6:36915400-36917800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
28	chr6:36915400-36918000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
29	chr6:36915600-36916000	Enhancers	iPS-15b Cell Line	embryonic stem cell
30	chr6:36915600-36916000	Flanking Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
31	chr6:36915600-36916200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
32	chr6:36915600-36916200	Enhancers	Pancreas	Pancrea
33	chr6:36915600-36916400	Bivalent Enhancer	Primary hematopoietic stem cells G-CSF-mobilized Female	--
34	chr6:36915600-36917200	Weak transcription	NHEK	skin
35	chr6:36915800-36916000	Enhancers	ES-WA7 Cell Line	embryonic stem cell
36	chr6:36915800-36916000	Enhancers	Brain Substantia Nigra	brain
37	chr6:36915800-36916000	Enhancers	HUVEC	blood vessel
38	chr6:36915800-36916000	Enhancers	NH-A	brain
39	chr6:36915800-36916200	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
40	chr6:36915800-36916200	Enhancers	HUES64 Cell Line	embryonic stem cell
41	chr6:36915800-36916200	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
42	chr6:36915800-36916200	Flanking Active TSS	Primary T helper naive cells fromperipheralblood	blood
43	chr6:36915800-36916200	Flanking Active TSS	Primary T helper cells fromperipheralblood	blood
44	chr6:36915800-36916200	Enhancers	Cortex derived primary cultured neurospheres	brain
45	chr6:36915800-36916200	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
46	chr6:36915800-36916200	Enhancers	Primary mononuclear cells fromperipheralblood	Blood
47	chr6:36915800-36916200	Flanking Active TSS	Thymus	Thymus
48	chr6:36915800-36916400	Enhancers	Primary hematopoietic stem cells	blood
49	chr6:36915800-36916400	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
50	chr6:36915800-36917000	Weak transcription	Brain Cingulate Gyrus	brain

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