Variant report

Variant	nsv886694
Chromosome Location	chr6:140701423-141001420
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:2168)
CpG islands
(count:245)
Chromatin interactive
region (count:99)
LncRNA
region (count:2)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:2168 , 50 per page) page: 1 2 3 4 5 6 7 ... 44

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr6:140807254-140807732	K562	blood:	n/a	n/a
2	ARID3A	chr6:140701186-140702617	HepG2	liver:	n/a	chr6:140702117-140702133 chr6:140702116-140702132
3	ARID3A	chr6:140905921-140905975	K562	blood:	n/a	n/a
4	ARID3A	chr6:140762454-140762798	HepG2	liver:	n/a	n/a
5	ARID3A	chr6:140858961-140859228	HepG2	liver:	n/a	n/a
6	ARID3A	chr6:140709298-140710346	HepG2	liver:	n/a	n/a
7	ATF1	chr6:140799707-140799907	K562	blood:	n/a	n/a
8	ATF1	chr6:140893405-140893685	K562	blood:	n/a	n/a
9	ATF1	chr6:140762553-140762766	K562	blood:	n/a	n/a
10	ATF1	chr6:140726769-140726776	K562	blood:	n/a	n/a
11	ATF1	chr6:140807261-140807567	K562	blood:	n/a	n/a
12	ATF2	chr6:140893204-140893707	GM12878	blood:	n/a	n/a
13	ATF2	chr6:140962459-140962964	GM12878	blood:	n/a	n/a
14	ATF2	chr6:140907528-140908482	GM12878	blood:	n/a	n/a
15	ATF2	chr6:140907544-140908522	GM12878	blood:	n/a	n/a
16	ATF3	chr6:140807193-140807621	K562	blood:	n/a	n/a
17	ATF3	chr6:140858819-140859264	A549	lung:	n/a	n/a
18	BACH1	chr6:140931711-140931747	K562	blood:	n/a	n/a
19	BACH1	chr6:140731255-140731274	H1-hESC	embryonic stem cell:	n/a	n/a
20	BATF	chr6:140999274-140999525	GM12878	blood:	n/a	n/a
21	BATF	chr6:140863996-140864422	GM12878	blood:	n/a	chr6:140864160-140864171 chr6:140864147-140864155
22	BATF	chr6:140957343-140957787	GM12878	blood:	n/a	n/a
23	BATF	chr6:140807295-140807491	GM12878	blood:	n/a	chr6:140807425-140807436
24	BATF	chr6:140962532-140962960	GM12878	blood:	n/a	n/a
25	BATF	chr6:140861953-140862210	GM12878	blood:	n/a	n/a
26	BATF	chr6:140867729-140867987	GM12878	blood:	n/a	n/a
27	BATF	chr6:140863995-140864370	GM12878	blood:	n/a	chr6:140864160-140864171 chr6:140864147-140864155
28	BATF	chr6:140861965-140862170	GM12878	blood:	n/a	n/a
29	BATF	chr6:140962571-140962917	GM12878	blood:	n/a	n/a
30	BATF	chr6:140893208-140893582	GM12878	blood:	n/a	chr6:140893374-140893385
31	BATF	chr6:140907813-140908309	GM12878	blood:	n/a	n/a
32	BATF	chr6:140907543-140908374	GM12878	blood:	n/a	n/a
33	BCL11A	chr6:140863926-140864415	GM12878	blood:	n/a	chr6:140864143-140864152
34	BCL11A	chr6:140962665-140962965	GM12878	blood:	n/a	n/a
35	BCL11A	chr6:140861939-140862202	GM12878	blood:	n/a	n/a
36	BCL11A	chr6:140737695-140737927	GM12878	blood:	n/a	n/a
37	BCL11A	chr6:140907600-140908344	GM12878	blood:	n/a	n/a
38	BCL11A	chr6:140907738-140908243	GM12878	blood:	n/a	n/a
39	BCL11A	chr6:140957373-140957725	GM12878	blood:	n/a	n/a
40	BCL11A	chr6:140757676-140757957	H1-hESC	embryonic stem cell:	n/a	n/a
41	BCL11A	chr6:140962597-140962976	GM12878	blood:	n/a	n/a
42	BCL11A	chr6:140757546-140757919	H1-hESC	embryonic stem cell:	n/a	n/a
43	BCL11A	chr6:140863867-140864442	GM12878	blood:	n/a	chr6:140864143-140864152
44	BCL11A	chr6:140867698-140868023	GM12878	blood:	n/a	n/a
45	BCL3	chr6:140907733-140908269	GM12878	blood:	n/a	n/a
46	BCL3	chr6:140858834-140859296	A549	lung:	n/a	n/a
47	BCL3	chr6:140863964-140864467	GM12878	blood:	n/a	chr6:140864143-140864152
48	BCL3	chr6:140861957-140862188	GM12878	blood:	n/a	n/a
49	BCL3	chr6:140907648-140908396	GM12878	blood:	n/a	n/a
50	BCL3	chr6:140923817-140924135	GM12878	blood:	n/a	n/a

(count:245 , 50 per page) page: 1 2 3 4 5

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:140923112-140923162	NH-A	brain:	n/a
2	chr6:140923112-140923162	NH-A	brain:	n/a
3	chr6:140762224-140762274	AG09319	gingival:	n/a
4	chr6:140923112-140923162	HNPCEpiC	eye:	n/a
5	chr6:140759213-140759263	HCT-116	colon:	n/a
6	chr6:140957775-140957825	GM12891	blood:	n/a
7	chr6:140762224-140762274	H1-hESC	embryonic stem cell:	embryo
8	chr6:140759213-140759263	AG10803	skin:	n/a
9	chr6:140759213-140759263	HL-60	blood:	n/a
10	chr6:140762224-140762274	SAEC	small airway:	n/a
11	chr6:140923112-140923162	GM12892	blood:	n/a
12	chr6:140762224-140762274	LNCaP	prostate:	n/a
13	chr6:140762224-140762274	Hela-S3	cervix:	n/a
14	chr6:140957775-140957825	AG09309	skin:	n/a
15	chr6:140759213-140759263	SK-N-MC	brain:	n/a
16	chr6:140923112-140923162	MCF-7	breast:	n/a
17	chr6:140957775-140957825	SK-N-SH_RA	brain:	n/a
18	chr6:140759213-140759263	Jurkat	blood:	n/a
19	chr6:140759213-140759263	AoSMC	blood vessel:	n/a
20	chr6:140762224-140762274	AG04450	lung:	fetal
21	chr6:140762224-140762274	PFSK-1	brain:	n/a
22	chr6:140923112-140923162	HEK293	kidney:	embryo
23	chr6:140759213-140759263	NT2-D1	testis:	n/a
24	chr6:140759213-140759263	BE2_C	brain:	n/a
25	chr6:140759213-140759263	PANC-1	pancreas:	n/a
26	chr6:140762224-140762274	AG09309	skin:	n/a
27	chr6:140759213-140759263	HMEC	breast:	n/a
28	chr6:140923112-140923162	RPTEC	kidney:	n/a
29	chr6:140762224-140762274	SK-N-SH	brain:	n/a
30	chr6:140762224-140762274	HAEpiC	amniotic membrane:	n/a
31	chr6:140759213-140759263	BJ	skin:	n/a
32	chr6:140957775-140957825	HCPEpiC	choroid plexus:	n/a
33	chr6:140957775-140957825	PrEC	prostate:	n/a
34	chr6:140923112-140923162	Hepatocyte	liver:	n/a
35	chr6:140957775-140957825	LNCaP	prostate:	n/a
36	chr6:140759213-140759263	AG04449	skin:	fetal
37	chr6:140762224-140762274	NHBE	bronchial:	n/a
38	chr6:140762224-140762274	HNPCEpiC	eye:	n/a
39	chr6:140762224-140762274	Jurkat	blood:	n/a
40	chr6:140923112-140923162	Hela-S3	cervix:	n/a
41	chr6:140762224-140762274	U87	brain:	n/a
42	chr6:140923112-140923162	HUVEC	blood vessel:	n/a
43	chr6:140923112-140923162	AG04450	lung:	fetal
44	chr6:140762224-140762274	HRPEpiC	eye:	n/a
45	chr6:140957775-140957825	HRE	kidney:	n/a
46	chr6:140759213-140759263	HepG2	liver:	n/a
47	chr6:140759213-140759263	GM06990	blood:	n/a
48	chr6:140762224-140762274	HCPEpiC	choroid plexus:	n/a
49	chr6:140957775-140957825	ProgFib	skin:	n/a
50	chr6:140762224-140762274	HRCEpiC	kidney:	n/a

(count:99 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr6:140781738..140784199-chr6:140901701..140903255,2	MCF-7	breast:
2	chr6:140784693..140787104-chr6:140862436..140865018,2	MCF-7	breast:
3	chr6:140983001..140985814-chr6:140986473..140989700,3	K562	blood:
4	chr6:140858084..140862104-chr6:140862610..140866313,5	MCF-7	breast:
5	chr6:140853689..140855207-chr6:140859396..140862006,2	MCF-7	breast:
6	chr6:140905427..140908857-chr6:140910975..140913769,3	K562	blood:
7	chr6:140714565..140716677-chr6:140717350..140719283,2	K562	blood:
8	chr6:140874402..140877217-chr6:140878375..140880350,3	K562	blood:
9	chr6:140912649..140915188-chr6:140915453..140918177,2	K562	blood:
10	chr6:140792430..140794846-chr6:140795298..140797502,2	K562	blood:
11	chr6:140858927..140861812-chr6:141885115..141886624,2	MCF-7	breast:
12	chr6:140857240..140860582-chr6:140860847..140863194,3	MCF-7	breast:
13	chr6:139694012..139695798-chr6:140707168..140709411,2	MCF-7	breast:
14	chr6:140757123..140759381-chr6:140760081..140761694,2	K562	blood:
15	chr6:140974220..140975794-chr6:140989570..140992507,2	K562	blood:
16	chr6:140905427..140908857-chr6:140910975..140913769,3	K562	blood:
17	chr6:140995862..140998424-chr6:141006767..141008386,2	K562	blood:
18	chr6:140786057..140787646-chr6:140788121..140789995,2	MCF-7	breast:
19	chr6:140976457..140978107-chr6:140978749..140981141,2	K562	blood:
20	chr6:139694299..139696526-chr6:140760601..140764243,4	MCF-7	breast:
21	chr6:140718875..140720983-chr6:140765864..140768587,2	K562	blood:
22	chr6:140833959..140835825-chr6:140838892..140841501,3	K562	blood:
23	chr6:140843664..140845926-chr6:140846487..140848219,2	MCF-7	breast:
24	chr6:140781738..140784199-chr6:140901701..140903255,2	MCF-7	breast:
25	chr6:140791961..140793647-chr6:140795431..140798241,2	K562	blood:
26	chr20:55766654..55769141-chr6:140857545..140859135,2	MCF-7	breast:
27	chr6:140847082..140849517-chr6:140851014..140853336,2	K562	blood:
28	chr6:139694080..139696813-chr6:140857145..140860019,3	MCF-7	breast:
29	chr6:140973276..140976134-chr6:140976580..140978655,2	MCF-7	breast:
30	chr6:140833959..140835825-chr6:140838892..140841501,3	K562	blood:
31	chr6:140783720..140785500-chr6:140814959..140816884,2	MCF-7	breast:
32	chr6:140874402..140877217-chr6:140878375..140880350,3	K562	blood:
33	chr6:140783720..140785500-chr6:140814959..140816884,2	MCF-7	breast:
34	chr6:140976457..140978107-chr6:140978749..140981141,2	K562	blood:
35	chr6:140912649..140915188-chr6:140915453..140918177,2	K562	blood:
36	chr6:140782673..140785251-chr6:140787404..140790151,3	K562	blood:
37	chr6:140770834..140773454-chr6:140778154..140780325,2	K562	blood:
38	chr6:140815482..140817234-chr6:140819152..140821288,2	MCF-7	breast:
39	chr6:140773150..140776945-chr6:140859067..140862028,3	MCF-7	breast:
40	chr6:140905860..140907615-chr6:140923172..140925767,2	K562	blood:
41	chr6:140837143..140838822-chr6:140841143..140842931,2	K562	blood:
42	chr6:140847082..140849517-chr6:140851014..140853336,2	K562	blood:
43	chr6:140853689..140855207-chr6:140859396..140862006,2	MCF-7	breast:
44	chr6:140857240..140860582-chr6:140860847..140863194,3	MCF-7	breast:
45	chr6:139979450..139981028-chr6:140707794..140709299,2	MCF-7	breast:
46	chr6:140843664..140845926-chr6:140846487..140848219,2	MCF-7	breast:
47	chr6:140784119..140785901-chr6:140788194..140790332,2	MCF-7	breast:
48	chr6:140837143..140838822-chr6:140841143..140842931,2	K562	blood:
49	chr6:140859536..140862097-chr6:140864058..140865635,2	K562	blood:
50	chr6:140773150..140776945-chr6:140859067..140862028,3	MCF-7	breast:

(count:2 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-HECA-10	chr6:140928455-140928491	l_3279_chr6:140928454-140973185_placenta
2	lnc-HECA-10	chr6:140972927-140973185	l_3279_chr6:140928454-140973185_placenta

No data

Variant related genes	Relation type
ENSG00000221336	TF binding region
MIR4465	TF binding region
ENSG00000221336	CpG island
MIR4465	CpG island
ENSG00000164442	chromatin interactions

Extended variants
information (count: 8626 )
Associated
traits (count: 85 )

Variant overlapped rSNPs/rCNVs (count:8626 , 50 per page) page: 1 2 3 4 5 6 7 ... 173

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs11155111	chr6:140701423-140701424	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs530491172	chr6:140701477-140701478	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
3	rs552191500	chr6:140701511-140701512	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
4	rs11155112	chr6:140701518-140701519	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
5	rs528315508	chr6:140701615-140701616	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
6	rs546813194	chr6:140701630-140701631	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
7	rs568594505	chr6:140701631-140701632	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
8	rs535935202	chr6:140701638-140701639	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
9	rs139354536	chr6:140701753-140701754	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
10	rs369076857	chr6:140701766-140701767	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
11	rs569177276	chr6:140701770-140701771	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
12	rs9495690	chr6:140701791-140701792	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
13	rs184549071	chr6:140701812-140701813	Enhancers Flanking Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs188962587	chr6:140701825-140701826	Enhancers Flanking Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs9484370	chr6:140701826-140701827	Enhancers Flanking Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs534171262	chr6:140701879-140701880	Enhancers Flanking Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs555520698	chr6:140701901-140701902	Enhancers Flanking Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs150048351	chr6:140701951-140701952	Enhancers Flanking Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs192577490	chr6:140701964-140701965	Enhancers Flanking Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs185060210	chr6:140701977-140701978	Enhancers Flanking Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs575140183	chr6:140701980-140701981	Enhancers Flanking Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs551366947	chr6:140701995-140701996	Enhancers Flanking Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs145396607	chr6:140702013-140702014	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
24	rs564269545	chr6:140702015-140702016	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
25	rs528372205	chr6:140702070-140702071	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
26	rs374436003	chr6:140702075-140702076	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
27	rs148807165	chr6:140702160-140702161	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
28	rs369485535	chr6:140702168-140702169	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
29	rs114636510	chr6:140702203-140702204	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs13214458	chr6:140702211-140702212	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
31	rs551101144	chr6:140702295-140702296	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs569296368	chr6:140702304-140702305	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs539492568	chr6:140702323-140702324	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs551750414	chr6:140702360-140702361	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs111688069	chr6:140702413-140702414	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs567081613	chr6:140702423-140702424	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs190557736	chr6:140702460-140702461	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs555606753	chr6:140702481-140702482	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs181073693	chr6:140702519-140702520	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs542417761	chr6:140702534-140702535	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs538008910	chr6:140702566-140702567	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs556818902	chr6:140702615-140702616	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs575294347	chr6:140702696-140702697	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs201900852	chr6:140702697-140702698	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs142820940	chr6:140702704-140702705	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs112286795	chr6:140702708-140702709	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs62429783	chr6:140702709-140702710	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs7756785	chr6:140702736-140702737	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs67648873	chr6:140702739-140702740	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs185915715	chr6:140702745-140702746	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:85)

Disease	PMID	Source
Uveal melanoma	21693616	CNVD
Glioblastoma multiforme	21080181	CNVD
Biliary cancer	19435499	CNVD
Medulloblastoma	21979893	CNVD
Malaria	21533027	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	21448237	CNVD
Autism	22495311	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Neuroblastoma	18923191	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Melanoma	18172304	CNVD
Cancer	21637783	CNVD
Gastric cancer	17908304	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Follicular lymphoma	19010834	CNVD
Non-small cell lung cancer	21044232	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	16608533	CNVD
Non-small cell lung cancer	21385341	CNVD
Prostate cancer	16705090	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Colorectal cancer	16272173	CNVD
Ependymoma	16718352	CNVD
High-proliferative meningiomas	17937814	CNVD
Intracranial tumor	16823260	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	16272173	CNVD
Wilms tumour	21544195	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Zellweger syndrome	21572526	CNVD
Follicular lymphoma	20505157	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Malignant melanoma	18718029	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Lung cancer	18438408	CNVD
Breast cancer	21858162	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Breast cancer	17603634	CNVD
Chondromyxoid Fibroma	20696777	CNVD
Cancer	21183584	CNVD
Developmental delay	19490664	CNVD
Burkitt''s lymphoma	18698080	CNVD
Follicular lymphoma	18703704	CNVD
Neurodevelopmental disorder	22521361	CNVD
small cell lung cancer	20016488	CNVD
Adenoid cystic carcinoma	18698036	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Leukemia	18688285	CNVD
Breast cancer	21364760	CNVD
Renal cell carcinoma	18592004	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Malignant melanoma	17260012	CNVD
Prostate cancer	18632612	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Acute myeloid leukemia	21251322	CNVD
Acute monocytic leukemia	16498392	CNVD
Endocrine pancreatic tumor	17914106	CNVD
Soft tissue tumor	16732325	CNVD
Myelofibrosis	22110671	CNVD
Intellectual disability	22045946	CNVD
craniofacial dysmorphism	21918468	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Schizophrenia	20967226	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD

Chromatin state (count:1377 , 50 per page) page: 1 2 3 4 5 6 7 ... 28

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:140700000-140704000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr6:140700200-140702800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
3	chr6:140700400-140702600	Enhancers	Fetal Intestine Small	intestine
4	chr6:140700400-140702600	Enhancers	Pancreatic Islets	Pancreatic Islet
5	chr6:140700600-140702000	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
6	chr6:140700600-140702400	Enhancers	NHDF-Ad	bronchial
7	chr6:140700800-140703600	Weak transcription	Placenta	Placenta
8	chr6:140701200-140701600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
9	chr6:140701200-140701600	Weak transcription	NHLF	lung
10	chr6:140701200-140701800	Enhancers	Liver	Liver
11	chr6:140701200-140702200	Enhancers	Muscle Satellite Cultured Cells	--
12	chr6:140701200-140702200	Flanking Active TSS	HepG2	liver
13	chr6:140701200-140702600	Enhancers	Osteobl	bone
14	chr6:140701200-140702800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
15	chr6:140701200-140703000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
16	chr6:140701400-140702200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
17	chr6:140701400-140702600	Enhancers	Fetal Intestine Large	intestine
18	chr6:140701400-140704200	Enhancers	Primary neutrophils fromperipheralblood	blood
19	chr6:140701600-140703800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
20	chr6:140701600-140703800	Enhancers	NHLF	lung
21	chr6:140701800-140702000	Flanking Active TSS	Liver	Liver
22	chr6:140701800-140702000	Enhancers	Pancreas	Pancrea
23	chr6:140701800-140702600	Enhancers	HMEC	breast
24	chr6:140702000-140702800	Enhancers	Primary monocytes fromperipheralblood	blood
25	chr6:140702000-140703000	Enhancers	Liver	Liver
26	chr6:140702200-140703600	Enhancers	HepG2	liver
27	chr6:140702400-140702800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
28	chr6:140702400-140708800	Weak transcription	NHDF-Ad	bronchial
29	chr6:140702600-140708800	Weak transcription	Pancreatic Islets	Pancreatic Islet
30	chr6:140702800-140703200	Weak transcription	Primary monocytes fromperipheralblood	blood
31	chr6:140702800-140703600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
32	chr6:140702800-140705800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
33	chr6:140703000-140703600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
34	chr6:140703200-140703800	Enhancers	Primary monocytes fromperipheralblood	blood
35	chr6:140703400-140704000	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
36	chr6:140703600-140703800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
37	chr6:140703600-140703800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
38	chr6:140703600-140704000	Enhancers	Placenta	Placenta
39	chr6:140703800-140706000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
40	chr6:140703800-140708600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
41	chr6:140704000-140706000	Weak transcription	Placenta	Placenta
42	chr6:140705800-140706400	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
43	chr6:140706000-140706800	ZNF genes & repeats	IMR90 fetal lung fibroblasts Cell Line	lung
44	chr6:140706000-140706800	ZNF genes & repeats	Liver	Liver
45	chr6:140706000-140709200	Enhancers	Placenta	Placenta
46	chr6:140706200-140706600	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
47	chr6:140706200-140707000	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell
48	chr6:140706400-140706600	ZNF genes & repeats	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
49	chr6:140706400-140727000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
50	chr6:140706600-140714600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links