Variant report

Variant	nsv889087
Chromosome Location	chr7:117226766-117246315
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:188)
CpG islands
(count:61)
Chromatin interactive
region (count:7)
LncRNA
region (count:1)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:188 , 50 per page) page: 1 2 3 4

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF2	chr7:117228213-117228911	GM12878	blood:	n/a	n/a
2	ATF2	chr7:117228256-117228885	GM12878	blood:	n/a	n/a
3	ATF3	chr7:117228178-117228937	A549	lung:	n/a	n/a
4	BACH1	chr7:117245114-117245164	H1-hESC	embryonic stem cell:	n/a	n/a
5	BATF	chr7:117228364-117228827	GM12878	blood:	n/a	chr7:117228615-117228626
6	BCL11A	chr7:117228325-117228839	GM12878	blood:	n/a	n/a
7	BCL3	chr7:117228101-117228945	A549	lung:	n/a	n/a
8	BCL3	chr7:117228214-117228853	A549	lung:	n/a	n/a
9	BCL3	chr7:117245619-117246225	A549	lung:	n/a	n/a
10	BCLAF1	chr7:117228370-117228794	GM12878	blood:	n/a	n/a
11	BHLHE40	chr7:117228373-117228856	GM12878	blood:	n/a	n/a
12	BHLHE40	chr7:117243779-117244031	GM12878	blood:	n/a	n/a
13	BRCA1	chr7:117228113-117228980	Hela-S3	cervix:	n/a	chr7:117228650-117228657
14	BRCA1	chr7:117245834-117246047	Hela-S3	cervix:	n/a	n/a
15	CEBPB	chr7:117228036-117228960	A549	lung:	n/a	chr7:117228586-117228597
16	CEBPB	chr7:117245738-117246078	Hela-S3	cervix:	n/a	n/a
17	CEBPB	chr7:117228431-117228821	IMR90	lung:	n/a	chr7:117228586-117228597
18	CEBPB	chr7:117227809-117228967	Hela-S3	cervix:	n/a	chr7:117228586-117228597
19	CEBPB	chr7:117228349-117228788	MCF-7	breast:	n/a	chr7:117228586-117228597
20	CEBPB	chr7:117245562-117246203	A549	lung:	n/a	n/a
21	CEBPB	chr7:117228203-117228832	A549	lung:	n/a	chr7:117228586-117228597
22	CHD2	chr7:117228282-117228913	GM12878	blood:	n/a	n/a
23	CHD2	chr7:117228247-117228854	Hela-S3	cervix:	n/a	n/a
24	CTCF	chr7:117232469-117232518	MCF-7	breast:	n/a	n/a
25	CTCF	chr7:117232437-117232563	A549	lung:	n/a	n/a
26	CTCF	chr7:117242060-117242210	K562	blood:	n/a	n/a
27	CTCF	chr7:117236460-117236610	GM12866	blood:	n/a	n/a
28	CTCF	chr7:117232488-117232514	MCF-7	breast:	n/a	n/a
29	CTCF	chr7:117236439-117236509	Fibrobl	skin:	n/a	n/a
30	CTCF	chr7:117232459-117232519	MCF-7	breast:	n/a	n/a
31	CTCF	chr7:117232453-117232475	H1-hESC	embryonic stem cell:	n/a	n/a
32	CUX1	chr7:117228355-117228961	GM12878	blood:	n/a	chr7:117228518-117228529
33	E2F4	chr7:117241052-117241317	MCF10A-Er-Src	breast:	n/a	n/a
34	EBF1	chr7:117228332-117228863	GM12878	blood:	n/a	n/a
35	ELK1	chr7:117228418-117228860	Hela-S3	cervix:	n/a	n/a
36	EP300	chr7:117227989-117229014	A549	lung:	n/a	n/a
37	EP300	chr7:117228309-117228759	MCF-7	breast:	n/a	n/a
38	EP300	chr7:117227870-117229065	A549	lung:	n/a	n/a
39	EP300	chr7:117228365-117228805	GM12878	blood:	n/a	n/a
40	EP300	chr7:117241066-117241292	Hela-S3	cervix:	n/a	chr7:117241188-117241202 chr7:117241189-117241198
41	EP300	chr7:117245640-117246305	A549	lung:	n/a	n/a
42	EP300	chr7:117228233-117228878	GM12878	blood:	n/a	n/a
43	EP300	chr7:117228312-117228892	GM12878	blood:	n/a	n/a
44	EP300	chr7:117228294-117228819	MCF-7	breast:	n/a	n/a
45	EP300	chr7:117245448-117246403	A549	lung:	n/a	n/a
46	EP300	chr7:117245795-117246126	Hela-S3	cervix:	n/a	n/a
47	EP300	chr7:117228150-117228898	Hela-S3	cervix:	n/a	n/a
48	ETS1	chr7:117228178-117228827	A549	lung:	n/a	chr7:117228393-117228406
49	FOS	chr7:117228250-117228859	Hela-S3	cervix:	n/a	chr7:117228328-117228337
50	FOS	chr7:117228575-117228664	MCF10A-Er-Src	breast:	n/a	n/a

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr7:117228958-117229008	PFSK-1	brain:	n/a
2	chr7:117228958-117229008	ProgFib	skin:	n/a
3	chr7:117228958-117229008	Caco-2	colon:	n/a
4	chr7:117228958-117229008	HCF	heart:	n/a
5	chr7:117228958-117229008	LNCaP	prostate:	n/a
6	chr7:117228958-117229008	T-47D	breast:	n/a
7	chr7:117228958-117229008	PrEC	prostate:	n/a
8	chr7:117228958-117229008	CMK	blood:	n/a
9	chr7:117228958-117229008	HRCEpiC	kidney:	n/a
10	chr7:117228958-117229008	HRPEpiC	eye:	n/a
11	chr7:117228958-117229008	MCF10A-Er-Src	breast:	n/a
12	chr7:117228958-117229008	NH-A	brain:	n/a
13	chr7:117228958-117229008	GM19239	blood:	n/a
14	chr7:117228958-117229008	AG10803	skin:	n/a
15	chr7:117228958-117229008	ovcar-3	ovarian:	n/a
16	chr7:117228958-117229008	HCM	heart:	n/a
17	chr7:117228958-117229008	NB4	blood:	n/a
18	chr7:117228958-117229008	SAEC	small airway:	n/a
19	chr7:117228958-117229008	HMEC	breast:	n/a
20	chr7:117228958-117229008	GM12878	blood:	n/a
21	chr7:117228958-117229008	HEEpiC	esophagus:	n/a
22	chr7:117228958-117229008	GM12891	blood:	n/a
23	chr7:117228958-117229008	SK-N-SH_RA	brain:	n/a
24	chr7:117228958-117229008	HL-60	blood:	n/a
25	chr7:117228958-117229008	HRE	kidney:	n/a
26	chr7:117228958-117229008	GM06990	blood:	n/a
27	chr7:117228958-117229008	Jurkat	blood:	n/a
28	chr7:117228958-117229008	HNPCEpiC	eye:	n/a
29	chr7:117228958-117229008	HPAEpiC	pulmonary alveolar:	n/a
30	chr7:117228958-117229008	HCT-116	colon:	n/a
31	chr7:117228958-117229008	AG04450	lung:	fetal
32	chr7:117228958-117229008	SK-N-SH	brain:	n/a
33	chr7:117228958-117229008	BE2_C	brain:	n/a
34	chr7:117228958-117229008	A549	lung:	n/a
35	chr7:117228958-117229008	H1-hESC	embryonic stem cell:	embryo
36	chr7:117228958-117229008	K562	blood:	n/a
37	chr7:117228958-117229008	NT2-D1	testis:	n/a
38	chr7:117228958-117229008	AG04449	skin:	fetal
39	chr7:117228958-117229008	BJ	skin:	n/a
40	chr7:117228958-117229008	U87	brain:	n/a
41	chr7:117228958-117229008	HUVEC	blood vessel:	n/a
42	chr7:117228958-117229008	AG09309	skin:	n/a
43	chr7:117228958-117229008	HAEpiC	amniotic membrane:	n/a
44	chr7:117228958-117229008	HCPEpiC	choroid plexus:	n/a
45	chr7:117228958-117229008	NHBE	bronchial:	n/a
46	chr7:117228958-117229008	AG09319	gingival:	n/a
47	chr7:117228958-117229008	IMR90	lung:	fetal
48	chr7:117228958-117229008	MCF-7	breast:	n/a
49	chr7:117228958-117229008	SKMC	muscle:	n/a
50	chr7:117228958-117229008	Hela-S3	cervix:	n/a

(count:7 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	7:115847372-115857098..7:117228556-117233275	H1-hESC	embryonic stem cell:	embryo
2	chr7:117244166..117245859-chr7:117250473..117252926,2	MCF-7	breast:
3	7:117100350-117112126..7:117245849-117249704	H1-hESC	embryonic stem cell:	embryo
4	7:116544149-116547624..7:117245849-117249704	H1-hESC	embryonic stem cell:	embryo
5	7:116754962-116765597..7:117228556-117233275	Hela-S3	cervix:
6	7:115861595-115870968..7:117245849-117249704	H1-hESC	embryonic stem cell:	embryo
7	chr12:58237960..58239522-chr7:117246298..117249075,2	MCF-7	breast:

(count:1 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-CTTNBP2-1	chr7:117244845-117245043	ENSG00000083622.8

No data

Variant related genes	Relation type
ENSG00000234001	TF binding region
ENSG00000234001	CpG island
ENSG00000001626	chromatin interactions
ENSG00000175215	chromatin interactions
ENSG00000004866	chromatin interactions
ENSG00000135269	chromatin interactions

Extended variants
information (count: 921 )
Associated
traits (count: 85 )

Variant overlapped rSNPs/rCNVs (count:921 , 50 per page) page: 1 2 3 4 5 6 7 ... 19

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs4148710	chr7:117226766-117226767	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
2	rs545840658	chr7:117226829-117226830	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs3216281	chr7:117226840-117226841	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs184604201	chr7:117226869-117226870	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs371735330	chr7:117226873-117226874	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs17547853	chr7:117226904-117226905	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
7	rs148822953	chr7:117226916-117226917	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs75107848	chr7:117226938-117226939	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs577088138	chr7:117226952-117226953	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs188962921	chr7:117226974-117226975	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs544155413	chr7:117226997-117226998	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs181288662	chr7:117227006-117227007	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs186345990	chr7:117227052-117227053	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs35463889	chr7:117227059-117227060	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs542531322	chr7:117227062-117227063	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs376247179	chr7:117227120-117227121	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs541571940	chr7:117227146-117227147	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs35641133	chr7:117227175-117227176	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs527919992	chr7:117227183-117227184	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs527358122	chr7:117227199-117227200	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs540839513	chr7:117227238-117227239	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs144925469	chr7:117227285-117227286	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs140904990	chr7:117227365-117227366	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs150946515	chr7:117227444-117227445	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs550979746	chr7:117227458-117227459	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs369231577	chr7:117227475-117227476	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs79526136	chr7:117227481-117227482	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs180877927	chr7:117227613-117227614	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
29	rs34114986	chr7:117227641-117227642	Weak transcription Enhancers	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
30	rs138956250	chr7:117227654-117227655	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
31	rs142177283	chr7:117227657-117227658	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
32	rs566985320	chr7:117227666-117227667	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
33	rs143807881	chr7:117227721-117227722	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
34	rs528498285	chr7:117227726-117227727	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
35	rs558743244	chr7:117227730-117227731	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
36	rs570538005	chr7:117227731-117227732	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
37	rs199672916	chr7:117227756-117227757	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
38	rs397508234	chr7:117227784-117227785	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
39	rs193922503	chr7:117227785-117227786	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
40	rs397508233	chr7:117227791-117227792	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
41	rs76713772	chr7:117227792-117227793	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
42	rs397508235	chr7:117227793-117227794	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
43	rs397508236	chr7:117227794-117227795	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
44	rs397508237	chr7:117227796-117227797	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
45	rs35032490	chr7:117227802-117227803	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
46	rs397508238	chr7:117227805-117227806	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
47	rs387906368	chr7:117227809-117227810	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
48	rs148173473	chr7:117227814-117227815	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
49	rs397508239	chr7:117227818-117227819	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
50	rs397508240	chr7:117227819-117227820	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:85)

Disease	PMID	Source
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Thyroid cancer	19087340	CNVD
Seminomas	18059402	CNVD
Testicular cancer	18059402	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Autism	19415332	CNVD
Medulloblastoma	21979893	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
T-cell lymphomas	19863542	CNVD
Malaria	21533027	CNVD
Melanoma	18172304	CNVD
Renal cell carcinoma	19461508	CNVD
head and neck squamous cell carcinoma	19289630	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	22495311	CNVD
Wilms tumour	21544195	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Squamous cell cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Glioblastoma multiforme	17387387	CNVD
Low-grade fibromyxoid sarcoma	0	CNVD
Oligodendroglial tumors	17285580	CNVD
Endometrial cancer	22040021	CNVD
Burkitt''s lymphoma	18698080	CNVD
Breast cancer	21264507	CNVD
Shwachman-Diamond syndrome	22934832	CNVD
Colorectal cancer	19359472	CNVD
Cutaneous malignant melanoma	17690212	CNVD
Leukemia	17361228	CNVD
Breast cancer	16461572	CNVD
Peripheral t-cell lymphoma	19118030	CNVD
Malignant melanoma	17690212	CNVD
Renal cell carcinoma	18592004	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Multiple myeloma	17550852	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Neurodevelopmental disorder	22521361	CNVD
abortions and stillbirths	19751515	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Acute myeloid leukemia	20729466	CNVD
Lung cancer	18438408	CNVD
Metanephric adenoma	20802469	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Burkitt''s lymphoma	19759907	CNVD
Myelodysplastic syndrome	21251322	CNVD
Acute myeloid leukemia	21251322	CNVD
Chronic myeloid leukemia	21384125	CNVD
Breast cancer	21858162	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
lymphocytic leukemia	21291569	CNVD
Basal cell lymphoma	17053054	CNVD
Prostate cancer	16573809	CNVD
Medulloblastoma	16783165	CNVD
Biliary cancer	19435499	CNVD
Non-small cell lung cancer	21829676	CNVD
Ovarian neoplasms	16753589	CNVD
Prostate cancer	23792589	CNVD
Adenocarcinoma	21044232	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Non-small cell lung cancer	19889201	CNVD
Acute myeloid leukemia	18000384	CNVD
Esophageal adenocarcinoma	18820669	CNVD
Metastatic melanoma	18483359	CNVD
Autism	18414403	CNVD
Autism	19401682	CNVD
Autism	19546859	CNVD
Schizophrenia	19546859	CNVD
Tourette syndrome	19546859	CNVD
Melanoma	19188590	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
small cell lung cancer	20016488	CNVD
Glioblastoma multiforme	22286061	CNVD
Glioblastoma multiforme	21922591	CNVD
Sudden cardiac death	19188705	CNVD
Hepatocellular carcinoma	16785998	CNVD
Glioblastoma multiforme	18628472	CNVD
Cancer	20164919	CNVD
Breast cancer	22522925	CNVD
Schizophrenia	21346763	CNVD
Myelofibrosis	22110671	CNVD

Chromatin state (count:149 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:117208600-117232400	Weak transcription	Pancreas	Pancrea
2	chr7:117214000-117228000	Weak transcription	Rectal Mucosa Donor 31	rectum
3	chr7:117214400-117228000	Weak transcription	Rectal Mucosa Donor 29	rectum
4	chr7:117216800-117235600	Weak transcription	Sigmoid Colon	Sigmoid Colon
5	chr7:117218400-117228000	Weak transcription	Duodenum Mucosa	Duodenum
6	chr7:117223000-117226800	Weak transcription	HUES48 Cell Line	embryonic stem cell
7	chr7:117223000-117227000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
8	chr7:117223000-117227000	Weak transcription	HUES6 Cell Line	embryonic stem cell
9	chr7:117223000-117227800	Weak transcription	Liver	Liver
10	chr7:117223000-117228600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
11	chr7:117223200-117227800	Weak transcription	NHLF	lung
12	chr7:117223800-117228800	Enhancers	Dnd41	blood
13	chr7:117224600-117228000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
14	chr7:117225800-117228800	Enhancers	Fetal Thymus	thymus
15	chr7:117225800-117229000	Enhancers	Fetal Intestine Large	intestine
16	chr7:117226000-117227000	Enhancers	Placenta Amnion	Placenta Amnion
17	chr7:117226000-117227200	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
18	chr7:117226000-117230600	Enhancers	Hela-S3	cervix
19	chr7:117226200-117231000	Enhancers	Fetal Intestine Small	intestine
20	chr7:117226400-117226800	Weak transcription	iPS-20b Cell Line	embryonic stem cell
21	chr7:117226600-117227400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
22	chr7:117226600-117227600	Weak transcription	A549	lung
23	chr7:117226800-117227200	Enhancers	iPS-20b Cell Line	embryonic stem cell
24	chr7:117226800-117227400	Enhancers	HUES48 Cell Line	embryonic stem cell
25	chr7:117227000-117227400	Enhancers	ES-I3 Cell Line	embryonic stem cell
26	chr7:117227000-117227400	Enhancers	ES-WA7 Cell Line	embryonic stem cell
27	chr7:117227000-117227400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
28	chr7:117227000-117227400	Enhancers	HUES6 Cell Line	embryonic stem cell
29	chr7:117227000-117227400	Enhancers	HUES64 Cell Line	embryonic stem cell
30	chr7:117227000-117227400	Enhancers	iPS-18 Cell Line	embryonic stem cell
31	chr7:117227000-117227800	Enhancers	iPS-15b Cell Line	embryonic stem cell
32	chr7:117227000-117232000	Weak transcription	Placenta Amnion	Placenta Amnion
33	chr7:117227200-117227400	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
34	chr7:117227200-117228600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
35	chr7:117227400-117228400	Weak transcription	HUES48 Cell Line	embryonic stem cell
36	chr7:117227400-117228400	Weak transcription	HUES6 Cell Line	embryonic stem cell
37	chr7:117227600-117228600	Enhancers	A549	lung
38	chr7:117227800-117228000	Enhancers	NHLF	lung
39	chr7:117227800-117229400	Enhancers	Liver	Liver
40	chr7:117228000-117228400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
41	chr7:117228000-117228400	Enhancers	Rectal Mucosa Donor 29	rectum
42	chr7:117228000-117228800	Weak transcription	NHLF	lung
43	chr7:117228000-117229000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
44	chr7:117228000-117229000	Enhancers	HUVEC	blood vessel
45	chr7:117228000-117229400	Enhancers	Rectal Mucosa Donor 31	rectum
46	chr7:117228000-117231400	Enhancers	Duodenum Mucosa	Duodenum
47	chr7:117228200-117228400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
48	chr7:117228400-117228800	Flanking Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
49	chr7:117228400-117229400	Enhancers	HepG2	liver
50	chr7:117228400-117232000	Weak transcription	Rectal Mucosa Donor 29	rectum

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links