Variant report

Variant	nsv890854
Chromosome Location	chr8:49738821-49838908
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1616)
CpG islands
(count:2931)
Chromatin interactive
region (count:63)
LncRNA
region (count:4)
Mature miRNA
region (count: 0)
miRNA target
sites (count:17)

(count:1616 , 50 per page) page: 1 2 3 4 5 6 7 ... 33

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr8:49832094-49832369	HepG2	liver:	n/a	n/a
2	ARID3A	chr8:49831104-49831451	HepG2	liver:	n/a	n/a
3	ARID3A	chr8:49786294-49786585	K562	blood:	n/a	n/a
4	ATF1	chr8:49838233-49838998	K562	blood:	n/a	n/a
5	ATF1	chr8:49786260-49786535	K562	blood:	n/a	n/a
6	ATF2	chr8:49838128-49838736	GM12878	blood:	n/a	n/a
7	ATF2	chr8:49838148-49838726	GM12878	blood:	n/a	n/a
8	ATF3	chr8:49838189-49838725	K562	blood:	n/a	chr8:49838570-49838583 chr8:49838574-49838581 chr8:49838570-49838585 chr8:49838574-49838584 chr8:49838574-49838582 chr8:49838574-49838585 chr8:49838573-49838581
9	ATF3	chr8:49777332-49777984	HCT-116	colon:	n/a	n/a
10	ATF3	chr8:49786232-49786555	K562	blood:	n/a	n/a
11	BACH1	chr8:49827696-49828046	H1-hESC	embryonic stem cell:	n/a	n/a
12	BACH1	chr8:49777644-49777699	H1-hESC	embryonic stem cell:	n/a	n/a
13	BACH1	chr8:49782970-49783069	H1-hESC	embryonic stem cell:	n/a	n/a
14	BACH1	chr8:49786229-49786494	K562	blood:	n/a	n/a
15	BACH1	chr8:49827717-49828064	K562	blood:	n/a	n/a
16	BACH1	chr8:49834416-49834667	H1-hESC	embryonic stem cell:	n/a	n/a
17	BATF	chr8:49815533-49815791	GM12878	blood:	n/a	chr8:49815622-49815633 chr8:49815627-49815637
18	BCLAF1	chr8:49834385-49834660	GM12878	blood:	n/a	chr8:49834606-49834619
19	BHLHE40	chr8:49814871-49815058	HepG2	liver:	n/a	n/a
20	BHLHE40	chr8:49831235-49831493	HepG2	liver:	n/a	n/a
21	BHLHE40	chr8:49792593-49792935	K562	blood:	n/a	n/a
22	BHLHE40	chr8:49834517-49834710	GM12878	blood:	n/a	n/a
23	BHLHE40	chr8:49811988-49812002	K562	blood:	n/a	n/a
24	BHLHE40	chr8:49838240-49838563	GM12878	blood:	n/a	n/a
25	BRCA1	chr8:49835249-49836593	Hela-S3	cervix:	n/a	n/a
26	BRCA1	chr8:49838080-49838775	Hela-S3	cervix:	n/a	n/a
27	BRCA1	chr8:49833443-49834169	Hela-S3	cervix:	n/a	n/a
28	BRCA1	chr8:49831282-49831327	HepG2	liver:	n/a	n/a
29	BRCA1	chr8:49816554-49816716	H1-hESC	embryonic stem cell:	n/a	n/a
30	BRCA1	chr8:49834450-49834773	H1-hESC	embryonic stem cell:	n/a	n/a
31	BRCA1	chr8:49838202-49838581	H1-hESC	embryonic stem cell:	n/a	n/a
32	BRCA1	chr8:49838446-49838653	GM12878	blood:	n/a	n/a
33	BRCA1	chr8:49788634-49789024	Hela-S3	cervix:	n/a	n/a
34	BRCA1	chr8:49811374-49811380	GM12878	blood:	n/a	n/a
35	CBX3	chr8:49835761-49836456	HCT-116	colon:	n/a	n/a
36	CBX3	chr8:49777309-49777958	HCT-116	colon:	n/a	n/a
37	CCNT2	chr8:49786293-49786562	K562	blood:	n/a	n/a
38	CEBPB	chr8:49812638-49812857	IMR90	lung:	n/a	n/a
39	CEBPB	chr8:49788641-49788899	IMR90	lung:	n/a	chr8:49788775-49788788
40	CEBPB	chr8:49833980-49834004	K562	blood:	n/a	n/a
41	CEBPB	chr8:49835150-49835495	IMR90	lung:	n/a	chr8:49835322-49835335
42	CEBPB	chr8:49803759-49804506	IMR90	lung:	n/a	n/a
43	CEBPB	chr8:49831165-49831608	A549	lung:	n/a	chr8:49831354-49831365
44	CEBPB	chr8:49830975-49831654	MCF-7	breast:	n/a	chr8:49831354-49831365
45	CEBPB	chr8:49833890-49834176	H1-hESC	embryonic stem cell:	n/a	n/a
46	CEBPB	chr8:49833795-49834243	MCF-7	breast:	n/a	n/a
47	CEBPB	chr8:49831147-49831572	HepG2	liver:	n/a	chr8:49831354-49831365
48	CEBPB	chr8:49825298-49825609	IMR90	lung:	n/a	chr8:49825462-49825473
49	CEBPB	chr8:49838113-49838796	A549	lung:	n/a	chr8:49838410-49838421 chr8:49838411-49838422
50	CEBPB	chr8:49788548-49789068	Hela-S3	cervix:	n/a	chr8:49788775-49788788

(count:2931 , 50 per page) page: 1 2 3 4 5 6 7 ... 59

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr8:49833833-49833883	HPAEpiC	pulmonary alveolar:	n/a
2	chr8:49812564-49812614	ECC-1	luminal epithelium:	n/a
3	chr8:49836160-49836210	HEEpiC	esophagus:	n/a
4	chr8:49833833-49833883	HPAEpiC	pulmonary alveolar:	n/a
5	chr8:49812564-49812614	ECC-1	luminal epithelium:	n/a
6	chr8:49836160-49836210	HEEpiC	esophagus:	n/a
7	chr8:49745160-49745210	HCF	heart:	n/a
8	chr8:49823497-49823547	HCT-116	colon:	n/a
9	chr8:49747620-49747670	ovcar-3	ovarian:	n/a
10	chr8:49783505-49783555	HNPCEpiC	eye:	n/a
11	chr8:49815934-49815984	HL-60	blood:	n/a
12	chr8:49783269-49783319	CMK	blood:	n/a
13	chr8:49834618-49834668	AG09309	skin:	n/a
14	chr8:49834618-49834668	GM12891	blood:	n/a
15	chr8:49783056-49783106	NHDF-neo	bronchial:	n/a
16	chr8:49833833-49833883	PANC-1	pancreas:	n/a
17	chr8:49823497-49823547	SK-N-MC	brain:	n/a
18	chr8:49833685-49833735	K562	blood:	n/a
19	chr8:49830937-49830987	H1-hESC	embryonic stem cell:	embryo
20	chr8:49826049-49826099	K562	blood:	n/a
21	chr8:49785517-49785567	HCT-116	colon:	n/a
22	chr8:49834543-49834593	HPAEpiC	pulmonary alveolar:	n/a
23	chr8:49746558-49746608	HL-60	blood:	n/a
24	chr8:49834643-49834693	HMEC	breast:	n/a
25	chr8:49782592-49782642	AG04449	skin:	fetal
26	chr8:49776492-49776542	AG04450	lung:	fetal
27	chr8:49783269-49783319	HCT-116	colon:	n/a
28	chr8:49833279-49833329	SK-N-MC	brain:	n/a
29	chr8:49815934-49815984	GM12891	blood:	n/a
30	chr8:49820761-49820811	HNPCEpiC	eye:	n/a
31	chr8:49782592-49782642	NHDF-neo	bronchial:	n/a
32	chr8:49783056-49783106	HUVEC	blood vessel:	n/a
33	chr8:49783505-49783555	T-47D	breast:	n/a
34	chr8:49779136-49779186	HPAEpiC	pulmonary alveolar:	n/a
35	chr8:49836230-49836280	BE2_C	brain:	n/a
36	chr8:49823357-49823407	HCPEpiC	choroid plexus:	n/a
37	chr8:49783269-49783319	MCF-7	breast:	n/a
38	chr8:49783652-49783702	Hepatocyte	liver:	n/a
39	chr8:49783056-49783106	Caco-2	colon:	n/a
40	chr8:49826049-49826099	H1-hESC	embryonic stem cell:	embryo
41	chr8:49813855-49813905	GM12892	blood:	n/a
42	chr8:49747745-49747795	AG09309	skin:	n/a
43	chr8:49823433-49823483	CMK	blood:	n/a
44	chr8:49783505-49783555	NHDF-neo	bronchial:	n/a
45	chr8:49837680-49837730	NB4	blood:	n/a
46	chr8:49830937-49830987	HL-60	blood:	n/a
47	chr8:49801972-49802022	NHDF-neo	bronchial:	n/a
48	chr8:49804177-49804227	Jurkat	blood:	n/a
49	chr8:49782694-49782744	HEK293	kidney:	embryo
50	chr8:49832881-49832931	AG09309	skin:	n/a

(count:63 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr8:49788058..49791254-chr8:49794477..49797938,3	MCF-7	breast:
2	chr8:49778368..49779890-chr8:49833727..49835856,2	MCF-7	breast:
3	chr8:49780791..49782303-chr8:49784724..49787609,2	MCF-7	breast:
4	chr8:49764914..49766964-chr8:49767999..49770983,2	MCF-7	breast:
5	chr8:49084592..49085141-chr8:49837959..49838538,2	MCF-7	breast:
6	chr8:49670019..49671921-chr8:49828868..49831772,2	MCF-7	breast:
7	chr8:49823789..49827076-chr8:49829140..49832248,4	MCF-7	breast:
8	chr8:49178987..49179896-chr8:49837365..49838730,6	MCF-7	breast:
9	chr8:49784576..49787352-chr8:49790973..49793435,2	K562	blood:
10	chr8:49231028..49232049-chr8:49837754..49838644,8	MCF-7	breast:
11	chr8:49746979..49749701-chr8:49758776..49761273,2	MCF-7	breast:
12	chr8:49778159..49780891-chr8:49797440..49799639,2	MCF-7	breast:
13	chr8:49795847..49799230-chr8:49800890..49804060,3	K562	blood:
14	chr8:49737146..49740078-chr8:49743348..49745585,2	K562	blood:
15	chr8:49777643..49779526-chr8:49780548..49782346,2	MCF-7	breast:
16	chr8:49758119..49760348-chr8:49762512..49764848,2	MCF-7	breast:
17	chr8:49779071..49781772-chr8:49783662..49786146,3	K562	blood:
18	chr8:49737146..49740078-chr8:49743348..49745585,2	K562	blood:
19	chr8:49776905..49778799-chr8:49782300..49784837,2	K562	blood:
20	chr8:49823570..49825612-chr8:49827229..49829086,2	MCF-7	breast:
21	chr8:49541767..49544762-chr8:49827612..49829547,2	MCF-7	breast:
22	chr8:49764914..49766964-chr8:49767999..49770983,2	MCF-7	breast:
23	chr8:49758119..49760348-chr8:49762512..49764848,2	MCF-7	breast:
24	chr8:49745146..49747245-chr8:49832436..49833968,2	MCF-7	breast:
25	chr8:49796061..49798020-chr8:49808059..49810348,2	K562	blood:
26	chr8:49780791..49782303-chr8:49784724..49787609,2	MCF-7	breast:
27	chr8:49084485..49085310-chr8:49837868..49838738,3	K562	blood:
28	chr8:49837099..49839896-chr8:49842697..49845711,3	K562	blood:
29	chr8:49183296..49184181-chr8:49838030..49838650,2	MCF-7	breast:
30	chr8:49776905..49778799-chr8:49782300..49784837,2	K562	blood:
31	chr8:49378679..49379249-chr8:49837885..49838414,2	MCF-7	breast:
32	chr8:49668073..49669071-chr8:49837841..49838748,4	MCF-7	breast:
33	chr8:49232603..49233354-chr8:49837851..49838387,2	MCF-7	breast:
34	chr8:49795847..49799230-chr8:49800890..49804060,3	K562	blood:
35	chr8:49784576..49787352-chr8:49790973..49793435,2	K562	blood:
36	chr8:49788058..49791254-chr8:49794477..49797938,3	MCF-7	breast:
37	chr8:49773374..49774880-chr8:49787693..49789657,2	K562	blood:
38	chr8:49776108..49777646-chr8:49810328..49812918,2	MCF-7	breast:
39	chr8:49665639..49667989-chr8:49831682..49833769,2	MCF-7	breast:
40	chr8:49831508..49833855-chr8:49836023..49837709,2	K562	blood:
41	chr8:49732830..49734878-chr8:49829641..49831417,2	MCF-7	breast:
42	chr8:49233283..49233917-chr8:49838000..49838703,2	MCF-7	breast:
43	chr8:49779071..49781772-chr8:49783662..49786146,3	K562	blood:
44	chr8:49823570..49825612-chr8:49827229..49829086,2	MCF-7	breast:
45	chr8:48795937..48796818-chr8:49837936..49838689,2	MCF-7	breast:
46	chr8:49235083..49235906-chr8:49837806..49838740,2	MCF-7	breast:
47	chr8:49778159..49780891-chr8:49797440..49799639,2	MCF-7	breast:
48	chr8:49728902..49731441-chr8:49740004..49742138,2	MCF-7	breast:
49	chr8:49227294..49228250-chr8:49837799..49838312,2	MCF-7	breast:
50	chr12:120729967..120732356-chr8:49740833..49742773,2	MCF-7	breast:

(count:4 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-C8orf22-7	chr8:49826475-49826939	NONHSAT126500
2	lnc-C8orf22-8	chr8:49823462-49823482	NONHSAT126498
3	lnc-C8orf22-8	chr8:49823039-49823221	NONHSAT126498
4	lnc-C8orf22-7	chr8:49826419-49826822	NONHSAT126499

No data

(count:17 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location
1	SNAI2	hsa-miR-203a	chr8:49831008-49831030
2	SNAI2	hsa-miR-203a	chr8:49831014-49831007
3	SNAI2	hsa-miR-181a-5p	chr8:49830455-49830477
4	SNAI2	hsa-miR-203a	chr8:49830646-49830667
5	SNAI2	hsa-miR-203a	chr8:49830563-49830585
6	SNAI2	hsa-miR-1	chr8:49830686-49830710
7	SNAI2	hsa-miR-124-3p	chr8:49830920-49830939
8	SNAI2	hsa-miR-124-3p	chr8:49830516-49830535
9	SNAI2	hsa-miR-181a-5p	chr8:49830773-49830795
10	SNAI2	hsa-miR-124-3p	chr8:49830726-49830720
11	SNAI2	hsa-miR-1	chr8:49830692-49830686
12	SNAI2	hsa-miR-182-5p	chr8:49830737-49830760
13	SNAI2	hsa-miR-124-3p	chr8:49830720-49830741
14	SNAI2	hsa-miR-124-3p	chr8:49830522-49830516
15	SNAI2	hsa-miR-124-3p	chr8:49830926-49830919
16	SNAI2	hsa-miR-182-5p	chr8:49831017-49831040
17	SNAI2	hsa-miR-204-5p	chr8:49830809-49830829

Variant related genes	Relation type
ENSG00000233109	TF binding region
SNAI2	TF binding region
ENSG00000233109	CpG island
SNAI2	CpG island
ENSG00000200795	chromatin interactions
ENSG00000115109	chromatin interactions
ENSG00000019549	chromatin interactions
ENSG00000233109	chromatin interactions

Extended variants
information (count: 3895 )
Associated
traits (count: 88 )

Variant overlapped rSNPs/rCNVs (count:3895 , 50 per page) page: 1 2 3 4 5 6 7 ... 78

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs10093573	chr8:49738821-49738822	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs140630358	chr8:49738880-49738881	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs187014135	chr8:49738896-49738897	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs530887710	chr8:49738899-49738900	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs562858006	chr8:49738954-49738955	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs549599698	chr8:49738962-49738963	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs376859310	chr8:49738963-49738964	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs370274428	chr8:49739003-49739004	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs531785061	chr8:49739079-49739080	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs535762868	chr8:49739105-49739106	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs369023559	chr8:49739183-49739184	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs547326569	chr8:49739186-49739187	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs565957292	chr8:49739193-49739194	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs539108732	chr8:49739203-49739204	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs144382965	chr8:49739234-49739235	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs146619675	chr8:49739243-49739244	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs537111900	chr8:49739262-49739263	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs77877603	chr8:49739333-49739334	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs558796298	chr8:49739334-49739335	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs572311334	chr8:49739335-49739336	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs541224975	chr8:49739336-49739337	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs548641693	chr8:49739362-49739363	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs556020550	chr8:49739413-49739414	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs552798446	chr8:49739458-49739459	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs574105066	chr8:49739499-49739500	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs74888552	chr8:49739540-49739541	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs559834456	chr8:49739547-49739548	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs78338378	chr8:49739554-49739555	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs191401491	chr8:49739565-49739566	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs77340007	chr8:49739642-49739643	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs530927306	chr8:49739651-49739652	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs368750920	chr8:49739668-49739669	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs549036351	chr8:49739697-49739698	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs141091646	chr8:49739743-49739744	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs183349329	chr8:49739747-49739748	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs547566845	chr8:49739769-49739770	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs546501474	chr8:49739815-49739816	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs187833178	chr8:49739820-49739821	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs566384171	chr8:49739898-49739899	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs373549781	chr8:49739935-49739936	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs189974085	chr8:49739944-49739945	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs115017992	chr8:49739954-49739955	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs555463588	chr8:49739961-49739962	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs567344305	chr8:49739970-49739971	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs534951161	chr8:49739980-49739981	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs553507092	chr8:49740028-49740029	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs182188299	chr8:49740070-49740071	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs552094181	chr8:49740076-49740077	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs150260080	chr8:49740083-49740084	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs554287301	chr8:49740100-49740101	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:88)

Disease	PMID	Source
Cancer	16751803	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Wilms tumour	21544195	CNVD
Gastric cancer	17908304	CNVD
Melanoma	18172304	CNVD
Medulloblastoma	21979893	CNVD
Ewing''s sarcoma	21437220	CNVD
Autism	19415332	CNVD
Malaria	21533027	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Esophageal cancer	21851588	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Breast cancer	21245420	CNVD
Thoracic aortic aneurysm	21092924	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
lymphocytic leukemia	21291569	CNVD
Liver carcinoma	19366792	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Seminomas	18059402	CNVD
Autism	22495311	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Lung cancer	18438408	CNVD
Pancreatic cancer	21811587	CNVD
Multiple myeloma	16461302	CNVD
Developmental delay	21373258	CNVD
Thyroid cancer	19087340	CNVD
Myelofibrosis	22110671	CNVD
Glioblastoma multiforme	21080181	CNVD
Breast cancer	17603634	CNVD
Pancreatic endocrine tumor	17639061	CNVD
Disorders of sex development	21048976	CNVD
Testicular cancer	18059402	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Salivary gland tumor	18059337	CNVD
Breast cancer	17133270	CNVD
Breast cancer	21509527	CNVD
Acute myeloid leukemia	20729466	CNVD
Breast cancer	21858162	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Cancer	20164919	CNVD
primary effusion lymphomas	17116491	CNVD
Esophageal cancer	20955586	CNVD
abnormal development	18461090	CNVD
Cancer	20164920	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Oral cancer	21386901	CNVD
Uveal melanoma	21693616	CNVD
Langer-Giedion syndrome	22283845	CNVD
Cancer	21637783	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Breast cancer	20632083	CNVD
Breast cancer	19602461	CNVD
Cancer	22429812	CNVD
Endometrial cancer	22040021	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oral cancer	19627613	CNVD
Prostate cancer	21088497	CNVD
colon cancer	17210682	CNVD
Breast cancer	21264507	CNVD
Breast cancer	22028636	CNVD
Acute myeloid leukemia	16864856	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Gastric cancer	17167181	CNVD
Colorectal cancer	19359472	CNVD
Breast cancer	16461572	CNVD
Human rectal carcinomas	16397240	CNVD
Medulloblastoma	16968546	CNVD
head and neck squamous cell carcinoma	18028549	CNVD
Breast cancer	17001317	CNVD
Ewing''s sarcoma	17952124	CNVD
Urothelial carcinoma	21177765	CNVD
small cell lung cancer	20016488	CNVD
Acute myeloid leukemia	21251322	CNVD
Glioblastoma multiforme	22286061	CNVD
Prostate cancer	16461572	CNVD
Breast cancer	16608533	CNVD
Metanephric adenoma	20802469	CNVD
Hepatocellular carcinoma	18803288	CNVD
Melanoma	17363583	CNVD
Prostate cancer	18632612	CNVD
Glioblastoma multiforme	18628472	CNVD
Colorectal cancer	21645411	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Renal cell carcinoma	21215367	CNVD

Chromatin state (count:1709 , 50 per page) page: 1 2 3 4 5 6 7 ... 35

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:49731000-49740200	Weak transcription	HSMMtube	muscle
2	chr8:49734000-49748200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr8:49734600-49742400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
4	chr8:49734600-49747800	Weak transcription	NHEK	skin
5	chr8:49736000-49739000	Enhancers	NHLF	lung
6	chr8:49736400-49739200	Enhancers	NHDF-Ad	bronchial
7	chr8:49737600-49747800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
8	chr8:49737800-49740400	Weak transcription	Fetal Lung	lung
9	chr8:49738400-49739400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
10	chr8:49738600-49739000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
11	chr8:49738600-49739200	Enhancers	Muscle Satellite Cultured Cells	--
12	chr8:49738600-49739200	Enhancers	Fetal Muscle Leg	muscle
13	chr8:49738800-49739000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
14	chr8:49738800-49739000	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
15	chr8:49738800-49740400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
16	chr8:49739200-49739600	Weak transcription	Fetal Muscle Leg	muscle
17	chr8:49739600-49740800	Enhancers	Fetal Muscle Leg	muscle
18	chr8:49740200-49740800	Enhancers	HSMMtube	muscle
19	chr8:49740400-49740600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
20	chr8:49740400-49740800	Enhancers	Fetal Lung	lung
21	chr8:49740800-49745000	Weak transcription	HSMMtube	muscle
22	chr8:49740800-49746000	Weak transcription	Fetal Lung	lung
23	chr8:49742400-49743600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
24	chr8:49744400-49744600	Bivalent Enhancer	Fetal Muscle Trunk	muscle
25	chr8:49744600-49744800	Enhancers	Fetal Muscle Trunk	muscle
26	chr8:49744800-49746600	Weak transcription	Fetal Muscle Trunk	muscle
27	chr8:49745000-49745400	Enhancers	HSMMtube	muscle
28	chr8:49745800-49746200	Enhancers	Fetal Kidney	kidney
29	chr8:49745800-49746400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
30	chr8:49746000-49746600	Enhancers	Fetal Lung	lung
31	chr8:49746200-49751000	Weak transcription	Fetal Kidney	kidney
32	chr8:49746400-49746800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
33	chr8:49746400-49746800	Enhancers	Fetal Stomach	stomach
34	chr8:49746400-49746800	Enhancers	Pancreas	Pancrea
35	chr8:49746600-49746800	Enhancers	Esophagus	oesophagus
36	chr8:49746600-49748000	Weak transcription	Fetal Lung	lung
37	chr8:49746600-49748600	Enhancers	Fetal Muscle Trunk	muscle
38	chr8:49746800-49747400	Weak transcription	Esophagus	oesophagus
39	chr8:49746800-49751000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
40	chr8:49746800-49751600	Weak transcription	Pancreas	Pancrea
41	chr8:49747000-49748000	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
42	chr8:49747400-49748000	Enhancers	Esophagus	oesophagus
43	chr8:49747400-49748600	Enhancers	Spleen	Spleen
44	chr8:49747600-49748000	Enhancers	Brain Germinal Matrix	brain
45	chr8:49747600-49748600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
46	chr8:49747600-49748600	Enhancers	Fetal Muscle Leg	muscle
47	chr8:49747600-49748600	Bivalent Enhancer	Fetal Stomach	stomach
48	chr8:49747600-49748800	Enhancers	Placenta Amnion	Placenta Amnion
49	chr8:49747800-49748400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
50	chr8:49747800-49748400	Enhancers	NHEK	skin

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links