Variant report

Variant	nsv892583
Chromosome Location	chr9:13166139-13350478
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1125)
CpG islands
(count:671)
Chromatin interactive
region (count:45)
LncRNA
region (count:4)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1125 , 50 per page) page: 1 2 3 4 5 6 7 ... 23

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr9:13213428-13213512	HepG2	liver:	n/a	n/a
2	ARID3A	chr9:13175891-13176097	HepG2	liver:	n/a	n/a
3	ARID3A	chr9:13268423-13268869	K562	blood:	n/a	n/a
4	ARID3A	chr9:13267952-13268141	K562	blood:	n/a	n/a
5	ARID3A	chr9:13203148-13203482	HepG2	liver:	n/a	n/a
6	ARID3A	chr9:13269505-13269999	K562	blood:	n/a	n/a
7	ATF1	chr9:13268465-13268833	K562	blood:	n/a	n/a
8	ATF1	chr9:13177283-13177369	K562	blood:	n/a	n/a
9	ATF1	chr9:13267768-13268030	K562	blood:	n/a	n/a
10	ATF1	chr9:13278032-13278621	K562	blood:	n/a	n/a
11	ATF3	chr9:13268444-13268740	K562	blood:	n/a	n/a
12	BACH1	chr9:13278144-13278639	H1-hESC	embryonic stem cell:	n/a	n/a
13	BACH1	chr9:13279363-13279954	H1-hESC	embryonic stem cell:	n/a	n/a
14	BHLHE40	chr9:13278045-13278680	K562	blood:	n/a	n/a
15	BHLHE40	chr9:13203194-13203515	K562	blood:	n/a	n/a
16	BHLHE40	chr9:13175800-13176124	HepG2	liver:	n/a	n/a
17	BHLHE40	chr9:13279384-13279648	K562	blood:	n/a	n/a
18	BHLHE40	chr9:13315456-13315474	K562	blood:	n/a	n/a
19	CBX3	chr9:13268543-13268820	K562	blood:	n/a	n/a
20	CCNT2	chr9:13279271-13279892	K562	blood:	n/a	chr9:13279622-13279631
21	CCNT2	chr9:13278210-13278873	K562	blood:	n/a	n/a
22	CEBPB	chr9:13181417-13182153	MCF-7	breast:	n/a	chr9:13181756-13181767 chr9:13181757-13181766 chr9:13181755-13181766
23	CEBPB	chr9:13205908-13206104	HepG2	liver:	n/a	chr9:13206038-13206049
24	CEBPB	chr9:13205890-13206225	ECC-1	luminal epithelium:	n/a	chr9:13206038-13206049
25	CEBPB	chr9:13205844-13206218	H1-hESC	embryonic stem cell:	n/a	chr9:13206038-13206049
26	CEBPB	chr9:13175810-13176048	HepG2	liver:	n/a	chr9:13175974-13175985
27	CEBPB	chr9:13205849-13206236	HepG2	liver:	n/a	chr9:13206038-13206049
28	CEBPB	chr9:13205853-13206230	Hela-S3	cervix:	n/a	chr9:13206038-13206049
29	CEBPB	chr9:13214924-13215198	HepG2	liver:	n/a	chr9:13215050-13215061
30	CEBPB	chr9:13175757-13176177	HepG2	liver:	n/a	chr9:13175974-13175985
31	CEBPB	chr9:13205845-13206243	IMR90	lung:	n/a	chr9:13206038-13206049
32	CEBPB	chr9:13219866-13220096	K562	blood:	n/a	chr9:13219944-13219955
33	CEBPB	chr9:13235169-13235395	A549	lung:	n/a	n/a
34	CEBPB	chr9:13203092-13203460	HepG2	liver:	n/a	n/a
35	CEBPB	chr9:13171335-13171637	IMR90	lung:	n/a	n/a
36	CEBPB	chr9:13205761-13206341	A549	lung:	n/a	chr9:13206038-13206049
37	CEBPB	chr9:13205844-13206281	MCF-7	breast:	n/a	chr9:13206038-13206049
38	CEBPB	chr9:13205869-13206152	K562	blood:	n/a	chr9:13206038-13206049
39	CEBPB	chr9:13219830-13220061	A549	lung:	n/a	chr9:13219944-13219955
40	CEBPB	chr9:13226942-13227210	A549	lung:	n/a	chr9:13227118-13227129 chr9:13227118-13227131 chr9:13227195-13227207
41	CEBPB	chr9:13219778-13220078	IMR90	lung:	n/a	chr9:13219944-13219955
42	CEBPB	chr9:13205927-13206130	HepG2	liver:	n/a	chr9:13206038-13206049
43	CEBPB	chr9:13181543-13181945	A549	lung:	n/a	chr9:13181756-13181767 chr9:13181757-13181766 chr9:13181755-13181766
44	CEBPB	chr9:13181521-13182077	Hela-S3	cervix:	n/a	chr9:13181756-13181767 chr9:13181757-13181766 chr9:13181755-13181766
45	CEBPB	chr9:13205797-13206237	MCF-7	breast:	n/a	chr9:13206038-13206049
46	CEBPB	chr9:13205850-13206222	ECC-1	luminal epithelium:	n/a	chr9:13206038-13206049
47	CEBPB	chr9:13205855-13206234	A549	lung:	n/a	chr9:13206038-13206049
48	CEBPB	chr9:13203176-13203354	HepG2	liver:	n/a	n/a
49	CEBPB	chr9:13181509-13182068	A549	lung:	n/a	chr9:13181756-13181767 chr9:13181757-13181766 chr9:13181755-13181766
50	CEBPB	chr9:13205852-13206261	K562	blood:	n/a	chr9:13206038-13206049

(count:671 , 50 per page) page: 1 2 3 4 5 6 7 ... 14

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr9:13323113-13323163	BJ	skin:	n/a
2	chr9:13284899-13284949	AoSMC	blood vessel:	n/a
3	chr9:13279482-13279532	Hepatocyte	liver:	n/a
4	chr9:13278512-13278562	GM12892	blood:	n/a
5	chr9:13278977-13279027	SK-N-SH_RA	brain:	n/a
6	chr9:13279482-13279532	T-47D	breast:	n/a
7	chr9:13278626-13278676	Caco-2	colon:	n/a
8	chr9:13278977-13279027	AG10803	skin:	n/a
9	chr9:13279482-13279532	CMK	blood:	n/a
10	chr9:13278626-13278676	AG09309	skin:	n/a
11	chr9:13323130-13323180	HCPEpiC	choroid plexus:	n/a
12	chr9:13278626-13278676	HEK293	kidney:	embryo
13	chr9:13278977-13279027	RPTEC	kidney:	n/a
14	chr9:13279482-13279532	MCF10A-Er-Src	breast:	n/a
15	chr9:13278977-13279027	AG09319	gingival:	n/a
16	chr9:13251228-13251278	HepG2	liver:	n/a
17	chr9:13278977-13279027	AG09309	skin:	n/a
18	chr9:13251431-13251481	GM06990	blood:	n/a
19	chr9:13251431-13251481	NHBE	bronchial:	n/a
20	chr9:13278512-13278562	BJ	skin:	n/a
21	chr9:13251431-13251481	HIPEpiC	eye:	n/a
22	chr9:13323113-13323163	SK-N-MC	brain:	n/a
23	chr9:13323113-13323163	MCF-7	breast:	n/a
24	chr9:13251228-13251278	RPTEC	kidney:	n/a
25	chr9:13251228-13251278	HMEC	breast:	n/a
26	chr9:13323113-13323163	NH-A	brain:	n/a
27	chr9:13284899-13284949	HepG2	liver:	n/a
28	chr9:13284899-13284949	AG09319	gingival:	n/a
29	chr9:13279482-13279532	MCF-7	breast:	n/a
30	chr9:13279482-13279532	SK-N-MC	brain:	n/a
31	chr9:13251228-13251278	GM19239	blood:	n/a
32	chr9:13251431-13251481	SAEC	small airway:	n/a
33	chr9:13279482-13279532	RPTEC	kidney:	n/a
34	chr9:13279482-13279532	ECC-1	luminal epithelium:	n/a
35	chr9:13323113-13323163	A549	lung:	n/a
36	chr9:13251431-13251481	HCT-116	colon:	n/a
37	chr9:13284899-13284949	ovcar-3	ovarian:	n/a
38	chr9:13278626-13278676	IMR90	lung:	fetal
39	chr9:13280025-13280075	HepG2	liver:	n/a
40	chr9:13279482-13279532	NT2-D1	testis:	n/a
41	chr9:13251228-13251278	SK-N-SH_RA	brain:	n/a
42	chr9:13284899-13284949	GM06990	blood:	n/a
43	chr9:13251431-13251481	Jurkat	blood:	n/a
44	chr9:13323130-13323180	AG04450	lung:	fetal
45	chr9:13251431-13251481	PANC-1	pancreas:	n/a
46	chr9:13249504-13249554	LNCaP	prostate:	n/a
47	chr9:13278626-13278676	U87	brain:	n/a
48	chr9:13251228-13251278	BE2_C	brain:	n/a
49	chr9:13251228-13251278	Hela-S3	cervix:	n/a
50	chr9:13251431-13251481	ECC-1	luminal epithelium:	n/a

(count:45 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr9:13171132..13173379-chr9:13209531..13212132,2	K562	blood:
2	chr9:13277467..13280147-chr9:13286399..13289258,3	MCF-7	breast:
3	chr9:13105793..13107889-chr9:13185268..13188197,2	K562	blood:
4	chr9:13166989..13169822-chr9:13171837..13174634,2	K562	blood:
5	chr9:13275549..13278427-chr9:13279998..13281670,2	K562	blood:
6	chr9:13281407..13283656-chr9:13286644..13288961,2	MCF-7	breast:
7	chr9:13236159..13239673-chr9:13240021..13241602,3	K562	blood:
8	chr9:13257934..13260781-chr9:13265128..13267553,2	K562	blood:
9	chr9:13176891..13178800-chr9:13180241..13181807,2	MCF-7	breast:
10	chr9:13266586..13268806-chr9:13275605..13278055,2	MCF-7	breast:
11	chr9:13253272..13256171-chr9:13277669..13280982,3	MCF-7	breast:
12	chr9:13287399..13289604-chr9:13290158..13292995,2	K562	blood:
13	chr9:13287399..13289604-chr9:13290158..13292995,2	K562	blood:
14	chr17:55977919..55980808-chr9:13278471..13279995,2	MCF-7	breast:
15	chr9:13223131..13225371-chr9:13226892..13228609,2	K562	blood:
16	chr9:13266586..13268806-chr9:13275605..13278055,2	MCF-7	breast:
17	chr9:13172301..13174538-chr9:14321514..14324465,2	K562	blood:
18	chr9:13227295..13229314-chr9:13231919..13233666,2	K562	blood:
19	chr9:13256063..13258580-chr9:13259796..13261728,2	MCF-7	breast:
20	chr9:13278596..13280107-chr9:13281623..13284453,2	MCF-7	breast:
21	chr9:13267404..13273261-chr9:13274037..13279578,8	K562	blood:
22	chr9:13275549..13278427-chr9:13279998..13281670,2	K562	blood:
23	chr9:13266536..13270627-chr9:13277145..13281714,5	K562	blood:
24	chr9:13162633..13164808-chr9:13166006..13168194,2	MCF-7	breast:
25	chr9:13256063..13258580-chr9:13259796..13261728,2	MCF-7	breast:
26	chr9:13166989..13169822-chr9:13171837..13174634,2	K562	blood:
27	chr9:13197252..13200075-chr9:13200413..13203199,2	K562	blood:
28	chr9:13223131..13225371-chr9:13226892..13228609,2	K562	blood:
29	chr9:13257934..13260781-chr9:13265128..13267553,2	K562	blood:
30	chr9:13230183..13232341-chr9:13234177..13235807,2	MCF-7	breast:
31	chr9:13281407..13283656-chr9:13286644..13288961,2	MCF-7	breast:
32	chr17:74129648..74131883-chr9:13173203..13175643,2	MCF-7	breast:
33	chr9:13033734..13035793-chr9:13280439..13283221,2	K562	blood:
34	chr9:13261386..13263235-chr9:13277146..13279520,2	MCF-7	breast:
35	chr9:13197252..13200075-chr9:13200413..13203199,2	K562	blood:
36	chr9:13245657..13247575-chr9:13257459..13259209,2	MCF-7	breast:
37	chr9:13227295..13229314-chr9:13231919..13233666,2	K562	blood:
38	chr9:13245657..13247575-chr9:13257459..13259209,2	MCF-7	breast:
39	chr9:13230183..13232341-chr9:13234177..13235807,2	MCF-7	breast:
40	chr9:13278089..13282078-chr9:14313109..14316114,3	MCF-7	breast:
41	chr9:13236159..13239673-chr9:13240021..13241602,3	K562	blood:
42	chr9:13278476..13280409-chr9:13296744..13299210,3	MCF-7	breast:
43	chr9:13176891..13178800-chr9:13180241..13181807,2	MCF-7	breast:
44	chr9:13276562..13283255-chr9:13284283..13286656,6	MCF-7	breast:
45	chr9:13171132..13173379-chr9:13209531..13212132,2	K562	blood:

(count:4 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-NFIB-1	chr9:13274509-13274609	ENSG00000234740.1
2	lnc-NFIB-1	chr9:13276573-13276770	ENSG00000234740.1
3	lnc-NFIB-1	chr9:13279029-13279186	ENSG00000234740.1
4	lnc-MPDZ-3	chr9:13322805-13323449	NONHSAT130234

No data

Variant related genes	Relation type
ENSG00000223672	TF binding region
MPDZ	TF binding region
ENSG00000234740	TF binding region
ENSG00000223672	CpG island
MPDZ	CpG island
ENSG00000234740	CpG island
ENSG00000234740	chromatin interactions
ENSG00000180891	chromatin interactions
ENSG00000147862	chromatin interactions
ENSG00000107186	chromatin interactions

Extended variants
information (count: 6495 )
Associated
traits (count: 103 )

Variant overlapped rSNPs/rCNVs (count:6495 , 50 per page) page: 1 2 3 4 5 6 7 ... 130

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs1556421	chr9:13166139-13166140	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs35085896	chr9:13166144-13166145	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs565988412	chr9:13166223-13166224	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs534558775	chr9:13166272-13166273	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs557542729	chr9:13166304-13166305	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs577457402	chr9:13166307-13166308	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs530930925	chr9:13166344-13166345	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs144633382	chr9:13166395-13166396	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs75051201	chr9:13166404-13166405	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs75922757	chr9:13166405-13166406	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs190287728	chr9:13166435-13166436	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs543211959	chr9:13166452-13166453	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs556648039	chr9:13166462-13166463	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs78327677	chr9:13166472-13166473	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs544646354	chr9:13166502-13166503	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs182168324	chr9:13166524-13166525	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs13295292	chr9:13166531-13166532	Weak transcription Strong transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
18	rs146347174	chr9:13166538-13166539	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs1556422	chr9:13166546-13166547	Weak transcription Strong transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
20	rs139298348	chr9:13166552-13166553	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs529962682	chr9:13166560-13166561	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs533612267	chr9:13166562-13166563	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs142620568	chr9:13166597-13166598	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs187895888	chr9:13166638-13166639	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs193003669	chr9:13166709-13166710	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs184121721	chr9:13166716-13166717	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs566807832	chr9:13166758-13166759	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs534309843	chr9:13166833-13166834	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs551311613	chr9:13166846-13166847	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs571188065	chr9:13166863-13166864	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs536883122	chr9:13166867-13166868	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs556845593	chr9:13166916-13166917	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs576499661	chr9:13166951-13166952	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs535529179	chr9:13166956-13166957	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs150996935	chr9:13166957-13166958	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs572510772	chr9:13166983-13166984	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs541432712	chr9:13167014-13167015	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs373849716	chr9:13167024-13167025	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs532404182	chr9:13167038-13167039	Weak transcription Strong transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
40	rs116970401	chr9:13167122-13167123	Weak transcription Strong transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
41	rs188225597	chr9:13167131-13167132	Weak transcription Strong transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
42	rs114898987	chr9:13167164-13167165	Weak transcription Strong transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
43	rs116819315	chr9:13167177-13167178	Weak transcription Strong transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
44	rs548847115	chr9:13167223-13167224	Weak transcription Strong transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
45	rs559020399	chr9:13167265-13167266	Weak transcription Strong transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
46	rs528106056	chr9:13167300-13167301	Weak transcription Strong transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
47	rs550949196	chr9:13167330-13167331	Weak transcription Strong transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
48	rs139636740	chr9:13167364-13167365	Weak transcription Strong transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
49	rs571824569	chr9:13167389-13167390	Weak transcription Strong transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
50	rs117422962	chr9:13167395-13167396	Weak transcription Strong transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:103)

Disease	PMID	Source
Disorders of sex development	21048976	CNVD
Honadal dysgenesis	21048976	CNVD
Medulloblastoma	21979893	CNVD
Lung cancer	16740712	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
abnormal development	18461090	CNVD
Glioblastoma multiforme	21080181	CNVD
Breast cancer	16608533	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Breast cancer	16272173	CNVD
Hepatocellular carcinoma	16750200	CNVD
Breast cancer	17133270	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Cervical cancer	21063398	CNVD
Retinoblastoma	22278416	CNVD
Splenic marginal zone lymphoma	18492102	CNVD
Melanoma	18172304	CNVD
Biliary cancer	19435499	CNVD
Gastric cancer	21586687	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Myopathy	18421352	CNVD
Neuroblastoma	18664255	CNVD
Acute lymphoblastic leukemia	18957548	CNVD
Myeloproliferative neoplasm	17564968	CNVD
Malignant meningioma	17937814	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	17603634	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oligodendroglial tumors	17285580	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
microdeletion syndrome	16199537	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Cancer	20164919	CNVD
Chronic myeloid leukemia	21384125	CNVD
Ovarian cancer	21720365	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
small cell lung cancer	20016488	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Lung cancer	18438408	CNVD
Urothelial carcinoma	21177765	CNVD
Oral cancer	21386901	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	21785460	CNVD
Esophageal adenocarcinoma	19417022	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21858162	CNVD
Renal cell carcinoma	21668985	CNVD
Myelodysplastic syndrome	21251322	CNVD
Autism	22495311	CNVD
Hepatocellular carcinoma	18803288	CNVD
Breast cancer	21364760	CNVD
Myelofibrosis	22110671	CNVD
Glioblastoma	19074898	CNVD
Malignant melanoma	19074898	CNVD
Prostate cancer	16573809	CNVD
Metanephric adenoma	20802469	CNVD
Developmental delay	21147756	CNVD
small cell lung cancer	21764851	CNVD
Glioblastoma multiforme	22286061	CNVD
Glioma	17123091	CNVD
Lung cancer	16773561	CNVD
Colorectal cancer	16272173	CNVD
Esophageal squamous carcinoma	18405350	CNVD
Gastric cancer	16891809	CNVD
Mental retardation	17847001	CNVD
Cutaneous squamous cell carcinomas	17420988	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Pilocytic astrocytoma	18670637	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Melanoma	22183965	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Breast cancer	21611746	CNVD
Melanoma	20877625	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
Autism	20858261	CNVD
Epilepsy	20858261	CNVD
Mental retardation	20858261	CNVD

Chromatin state (count:2089 , 50 per page) page: 1 2 3 4 5 6 7 ... 42

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:13103200-13175600	Weak transcription	HepG2	liver
2	chr9:13121600-13225200	Weak transcription	Placenta Amnion	Placenta Amnion
3	chr9:13122600-13186400	Weak transcription	Primary hematopoietic stem cells	blood
4	chr9:13135400-13223600	Weak transcription	Lung	lung
5	chr9:13136000-13192400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
6	chr9:13138800-13191800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
7	chr9:13139000-13188200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
8	chr9:13139800-13174800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
9	chr9:13140200-13167800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
10	chr9:13140200-13174800	Weak transcription	Right Ventricle	heart
11	chr9:13141000-13181600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
12	chr9:13141000-13197800	Weak transcription	NHDF-Ad	bronchial
13	chr9:13141200-13188200	Weak transcription	NHLF	lung
14	chr9:13143600-13202200	Weak transcription	Pancreas	Pancrea
15	chr9:13143800-13167800	Weak transcription	H1 Cell Line	embryonic stem cell
16	chr9:13145400-13203200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
17	chr9:13145400-13228600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
18	chr9:13146600-13202400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
19	chr9:13147000-13178000	Strong transcription	Breast Myoepithelial Primary Cells	Breast
20	chr9:13147800-13167000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
21	chr9:13148000-13167600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
22	chr9:13148200-13167600	Weak transcription	NH-A	brain
23	chr9:13150000-13167400	Weak transcription	HSMMtube	muscle
24	chr9:13150000-13193200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
25	chr9:13150400-13180800	Weak transcription	A549	lung
26	chr9:13153000-13167800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
27	chr9:13153200-13194800	Weak transcription	Fetal Kidney	kidney
28	chr9:13153800-13167800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
29	chr9:13154800-13167000	Weak transcription	Colon Smooth Muscle	Colon
30	chr9:13156800-13201400	Weak transcription	Psoas Muscle	Psoas
31	chr9:13157400-13175400	Weak transcription	Placenta	Placenta
32	chr9:13157600-13167800	Weak transcription	Osteobl	bone
33	chr9:13157800-13167400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
34	chr9:13158000-13167800	Weak transcription	HUES6 Cell Line	embryonic stem cell
35	chr9:13158200-13173200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
36	chr9:13158400-13167800	Weak transcription	Duodenum Smooth Muscle	Duodenum
37	chr9:13158600-13167200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
38	chr9:13158800-13188800	Weak transcription	Fetal Heart	heart
39	chr9:13160200-13167000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
40	chr9:13160600-13167600	Weak transcription	HSMM	muscle
41	chr9:13160600-13183000	Weak transcription	Skeletal Muscle Male	skeletal muscle
42	chr9:13161200-13166600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
43	chr9:13161200-13167600	Weak transcription	Skeletal Muscle Female	skeletal muscle
44	chr9:13161200-13167800	Weak transcription	Brain Anterior Caudate	brain
45	chr9:13161400-13167600	Weak transcription	Brain Cingulate Gyrus	brain
46	chr9:13161600-13170800	Weak transcription	Fetal Intestine Small	intestine
47	chr9:13161600-13188200	Weak transcription	Fetal Stomach	stomach
48	chr9:13161800-13170800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
49	chr9:13162000-13167800	Weak transcription	HUVEC	blood vessel
50	chr9:13162200-13167800	Weak transcription	Aorta	Aorta

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links