Variant report

Variant	nsv894811
Chromosome Location	chr10:6016399-6022562
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr10:6019794-6019867	K562	blood:	n/a	n/a
2	ATF2	chr10:6017796-6018336	GM12878	blood:	n/a	n/a
3	ATF2	chr10:6017736-6018370	GM12878	blood:	n/a	n/a
4	ATF3	chr10:6019368-6019831	K562	blood:	n/a	n/a
5	BACH1	chr10:6019541-6020062	H1-hESC	embryonic stem cell:	n/a	n/a
6	BACH1	chr10:6018595-6018754	H1-hESC	embryonic stem cell:	n/a	n/a
7	BACH1	chr10:6018987-6019236	H1-hESC	embryonic stem cell:	n/a	n/a
8	BATF	chr10:6017891-6018221	GM12878	blood:	n/a	n/a
9	BATF	chr10:6017802-6018339	GM12878	blood:	n/a	n/a
10	BCL11A	chr10:6017831-6018249	GM12878	blood:	n/a	chr10:6018056-6018065 chr10:6018175-6018184
11	BCL3	chr10:6017974-6018293	GM12878	blood:	n/a	chr10:6018056-6018065 chr10:6018175-6018184
12	BCL3	chr10:6017819-6018303	GM12878	blood:	n/a	chr10:6018056-6018065 chr10:6018175-6018184
13	BCLAF1	chr10:6017782-6018403	GM12878	blood:	n/a	chr10:6018056-6018065 chr10:6018175-6018184
14	BCLAF1	chr10:6019627-6020252	GM12878	blood:	n/a	chr10:6019666-6019675 chr10:6019657-6019670 chr10:6019667-6019680 chr10:6019657-6019670 chr10:6019949-6019958 chr10:6019661-6019674 chr10:6020188-6020197
15	BCLAF1	chr10:6017797-6018337	GM12878	blood:	n/a	chr10:6018056-6018065 chr10:6018175-6018184
16	BHLHE40	chr10:6018883-6020214	GM12878	blood:	n/a	chr10:6019144-6019160 chr10:6019658-6019674 chr10:6020067-6020083
17	BHLHE40	chr10:6018800-6020072	K562	blood:	n/a	chr10:6019144-6019160 chr10:6019658-6019674
18	BHLHE40	chr10:6017891-6018459	GM12878	blood:	n/a	n/a
19	BHLHE40	chr10:6017942-6018135	K562	blood:	n/a	n/a
20	BHLHE40	chr10:6019027-6019301	HepG2	liver:	n/a	chr10:6019144-6019160
21	BRCA1	chr10:6019805-6019918	Hela-S3	cervix:	n/a	n/a
22	CBX3	chr10:6018791-6019236	K562	blood:	n/a	n/a
23	CBX3	chr10:6019409-6019929	K562	blood:	n/a	n/a
24	CCNT2	chr10:6018906-6020211	K562	blood:	n/a	chr10:6019634-6019643
25	CEBPB	chr10:6019521-6020094	Hela-S3	cervix:	n/a	n/a
26	CEBPB	chr10:6017880-6018472	Hela-S3	cervix:	n/a	chr10:6018066-6018077 chr10:6018067-6018078 chr10:6018068-6018077
27	CEBPB	chr10:6017887-6018245	MCF-7	breast:	n/a	chr10:6018066-6018077 chr10:6018067-6018078 chr10:6018068-6018077
28	CEBPB	chr10:6017717-6018439	GM12878	blood:	n/a	chr10:6018066-6018077 chr10:6018067-6018078 chr10:6018068-6018077
29	CEBPB	chr10:6017878-6018233	K562	blood:	n/a	chr10:6018066-6018077 chr10:6018067-6018078 chr10:6018068-6018077
30	CEBPB	chr10:6017927-6018235	GM12878	blood:	n/a	chr10:6018066-6018077 chr10:6018067-6018078 chr10:6018068-6018077
31	CEBPB	chr10:6017922-6018220	A549	lung:	n/a	chr10:6018066-6018077 chr10:6018067-6018078 chr10:6018068-6018077
32	CEBPB	chr10:6017884-6018250	IMR90	lung:	n/a	chr10:6018066-6018077 chr10:6018067-6018078 chr10:6018068-6018077
33	CEBPB	chr10:6017894-6018250	K562	blood:	n/a	chr10:6018066-6018077 chr10:6018067-6018078 chr10:6018068-6018077
34	CEBPB	chr10:6017931-6018243	HepG2	liver:	n/a	chr10:6018066-6018077 chr10:6018067-6018078 chr10:6018068-6018077
35	CEBPB	chr10:6017918-6018127	K562	blood:	n/a	chr10:6018066-6018077 chr10:6018067-6018078 chr10:6018068-6018077
36	CEBPB	chr10:6018811-6019156	Hela-S3	cervix:	n/a	n/a
37	CHD1	chr10:6019606-6020087	H1-hESC	embryonic stem cell:	n/a	n/a
38	CHD1	chr10:6019645-6020161	GM12878	blood:	n/a	n/a
39	CHD1	chr10:6018918-6019100	H1-hESC	embryonic stem cell:	n/a	n/a
40	CHD1	chr10:6018570-6019199	GM12878	blood:	n/a	n/a
41	CHD2	chr10:6019615-6019982	K562	blood:	n/a	n/a
42	CHD2	chr10:6018859-6019298	K562	blood:	n/a	n/a
43	CHD2	chr10:6019842-6020015	HepG2	liver:	n/a	n/a
44	CHD2	chr10:6017902-6018081	K562	blood:	n/a	n/a
45	CHD2	chr10:6018573-6019021	GM12878	blood:	n/a	n/a
46	CHD2	chr10:6018616-6020252	Hela-S3	cervix:	n/a	chr10:6019510-6019520
47	CHD2	chr10:6017914-6018318	GM12878	blood:	n/a	n/a
48	CHD2	chr10:6019421-6020118	GM12878	blood:	n/a	chr10:6019510-6019520
49	CREB1	chr10:6017770-6018400	GM12878	blood:	n/a	n/a
50	CTBP2	chr10:6018739-6020287	H1-hESC	embryonic stem cell:	n/a	n/a

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr10:6020369-6020419	CMK	blood:	n/a
2	chr10:6020369-6020419	CMK	blood:	n/a
3	chr10:6018610-6018660	T-47D	breast:	n/a
4	chr10:6020330-6020380	AG10803	skin:	n/a
5	chr10:6020369-6020419	HUVEC	blood vessel:	n/a
6	chr10:6020330-6020380	NHDF-neo	bronchial:	n/a
7	chr10:6018955-6019005	NT2-D1	testis:	n/a
8	chr10:6020387-6020437	NB4	blood:	n/a
9	chr10:6020009-6020059	AG09309	skin:	n/a
10	chr10:6019621-6019671	AG04450	lung:	fetal
11	chr10:6019609-6019659	LNCaP	prostate:	n/a
12	chr10:6018955-6019005	Hepatocyte	liver:	n/a
13	chr10:6019526-6019576	NT2-D1	testis:	n/a
14	chr10:6020387-6020437	HMEC	breast:	n/a
15	chr10:6018610-6018660	NH-A	brain:	n/a
16	chr10:6019526-6019576	T-47D	breast:	n/a
17	chr10:6018955-6019005	IMR90	lung:	fetal
18	chr10:6020387-6020437	HAEpiC	amniotic membrane:	n/a
19	chr10:6018610-6018660	HCM	heart:	n/a
20	chr10:6018955-6019005	Hela-S3	cervix:	n/a
21	chr10:6018955-6019005	ovcar-3	ovarian:	n/a
22	chr10:6020369-6020419	GM12892	blood:	n/a
23	chr10:6020387-6020437	SK-N-SH	brain:	n/a
24	chr10:6018955-6019005	HL-60	blood:	n/a
25	chr10:6018955-6019005	PANC-1	pancreas:	n/a
26	chr10:6020585-6020635	NB4	blood:	n/a
27	chr10:6019609-6019659	HEEpiC	esophagus:	n/a
28	chr10:6019609-6019659	CMK	blood:	n/a
29	chr10:6020330-6020380	HUVEC	blood vessel:	n/a
30	chr10:6018610-6018660	HCT-116	colon:	n/a
31	chr10:6020369-6020419	H1-hESC	embryonic stem cell:	embryo
32	chr10:6019621-6019671	PrEC	prostate:	n/a
33	chr10:6019621-6019671	GM12878	blood:	n/a
34	chr10:6020369-6020419	PANC-1	pancreas:	n/a
35	chr10:6020387-6020437	HRCEpiC	kidney:	n/a
36	chr10:6020009-6020059	SKMC	muscle:	n/a
37	chr10:6019877-6019927	GM12891	blood:	n/a
38	chr10:6018610-6018660	HIPEpiC	eye:	n/a
39	chr10:6020330-6020380	SKMC	muscle:	n/a
40	chr10:6018610-6018660	BJ	skin:	n/a
41	chr10:6020369-6020419	HL-60	blood:	n/a
42	chr10:6019609-6019659	Caco-2	colon:	n/a
43	chr10:6020387-6020437	IMR90	lung:	fetal
44	chr10:6020330-6020380	ProgFib	skin:	n/a
45	chr10:6020330-6020380	NT2-D1	testis:	n/a
46	chr10:6020330-6020380	Hepatocyte	liver:	n/a
47	chr10:6019609-6019659	GM19239	blood:	n/a
48	chr10:6019877-6019927	GM12878	blood:	n/a
49	chr10:6019877-6019927	K562	blood:	n/a
50	chr10:6019877-6019927	HepG2	liver:	n/a

No.	Distal block	Cell Line	Cell type
1	chr10:6018551..6021640-chr10:6130714..6134315,5	MCF-7	breast:
2	chr10:5987354..5989797-chr10:6018047..6020538,2	MCF-7	breast:
3	chr10:6020440..6022335-chr10:6023498..6026826,3	MCF-7	breast:
4	chr10:6012910..6014707-chr10:6021829..6023507,2	MCF-7	breast:
5	chr10:6003571..6011080-chr10:6014794..6021269,11	K562	blood:
6	chr10:5853517..5856397-chr10:6017987..6020051,2	MCF-7	breast:
7	chr10:5931810..5933817-chr10:6018457..6020176,2	MCF-7	breast:
8	chr10:6018064..6019912-chr10:6129955..6132156,2	K562	blood:
9	chr10:6018278..6019533-chr10:6130531..6131243,3	MCF-7	breast:
10	chr10:5929157..5931311-chr10:6018059..6019673,2	MCF-7	breast:
11	chr10:6018064..6021783-chr10:6129304..6132316,4	K562	blood:
12	chr10:6012288..6016464-chr10:6016504..6020511,6	MCF-7	breast:
13	chr10:6019647..6020148-chr10:6130484..6131213,2	MCF-7	breast:
14	chr10:6018052..6020391-chr10:6022296..6024852,3	MCF-7	breast:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-IL15RA-2	chr10:6019740-6020150	NONHSAT011198
2	lnc-IL15RA-2	chr10:6019740-6020001	NONHSAT011199
3	lnc-FBXO18-2	chr10:6019377-6021681	NONHSAT011200
4	lnc-IL15RA-2	chr10:6019740-6020150	NONHSAT011197

Variant related genes	Relation type
IL15RA	TF binding region
IL15RA	CpG island
ENSG00000232807	chromatin interactions
ENSG00000134470	chromatin interactions
ENSG00000134452	chromatin interactions
ENSG00000134461	chromatin interactions
ENSG00000272764	chromatin interactions
ENSG00000134453	chromatin interactions
ENSG00000057608	chromatin interactions

Extended variants
information (count: 232 )
Associated
traits (count: 56 )

Variant overlapped rSNPs/rCNVs (count:232 , 50 per page) page: 1 2 3 4 5

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs7086174	chr10:6016399-6016400	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs564838599	chr10:6016451-6016452	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
3	rs551948578	chr10:6016456-6016457	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
4	rs532124380	chr10:6016483-6016484	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
5	rs8177770	chr10:6016602-6016603	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
6	rs8177643	chr10:6016620-6016621	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
7	rs373299563	chr10:6016627-6016628	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
8	rs8177642	chr10:6016743-6016744	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
9	rs117183219	chr10:6016795-6016796	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
10	rs370704463	chr10:6016804-6016805	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
11	rs570233495	chr10:6016811-6016812	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
12	rs142369110	chr10:6016835-6016836	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
13	rs146899069	chr10:6016844-6016845	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
14	rs8177641	chr10:6016892-6016893	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
15	rs535916729	chr10:6016982-6016983	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
16	rs34573843	chr10:6016989-6016990	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
17	rs397754710	chr10:6016995-6016996	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs368518596	chr10:6016996-6016997	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
19	rs144020329	chr10:6017020-6017021	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs535014401	chr10:6017039-6017040	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs553119874	chr10:6017068-6017069	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
22	rs535347409	chr10:6017150-6017151	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs180828393	chr10:6017156-6017157	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
24	rs185232286	chr10:6017172-6017173	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs554447586	chr10:6017192-6017193	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs8177769	chr10:6017209-6017210	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs139378798	chr10:6017261-6017262	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs189263721	chr10:6017297-6017298	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs2387090	chr10:6017311-6017312	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
30	rs564989730	chr10:6017320-6017321	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs556765893	chr10:6017360-6017361	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs8177768	chr10:6017366-6017367	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs546293873	chr10:6017369-6017370	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
34	rs561375651	chr10:6017370-6017371	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs199616394	chr10:6017389-6017390	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
36	rs185753159	chr10:6017462-6017463	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs41294201	chr10:6017523-6017524	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
38	rs8177639	chr10:6017555-6017556	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs41294203	chr10:6017563-6017564	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
40	rs191933613	chr10:6017567-6017568	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs573193502	chr10:6017621-6017622	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs8177638	chr10:6017649-6017650	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
43	rs540679668	chr10:6017666-6017667	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs1977263	chr10:6017676-6017677	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
45	rs552540092	chr10:6017716-6017717	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
46	rs182801076	chr10:6017717-6017718	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs534841434	chr10:6017786-6017787	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
48	rs201490854	chr10:6017787-6017788	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
49	rs8177767	chr10:6017813-6017814	Flanking Active TSS Weak transcription Active TSS Enhancers Bivalent Enhancer	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
50	rs8177637	chr10:6017838-6017839	Flanking Active TSS Weak transcription Active TSS Enhancers Bivalent Enhancer	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a

Variant related diseases (count:56)

Disease	PMID	Source
Sudden cardiac death	19188705	CNVD
Digeorge syndrome	22283845	CNVD
Cancer	21129771	CNVD
Colorectal cancer	20709793	CNVD
Wilms tumour	19047088	CNVD
Hepatocellular carcinoma	16750200	CNVD
Acute myeloid leukemia	16864856	CNVD
Cancer	21183584	CNVD
Barakat syndrome	22470819	CNVD
Melanoma	18172304	CNVD
Ovarian cancer	21720365	CNVD
Autism	18414403	CNVD
Malignant melanoma	18718029	CNVD
Breast cancer	22032731	CNVD
Medulloblastoma	16783165	CNVD
Breast cancer	17133270	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Breast cancer	17603634	CNVD
Endometrial cancer	22040021	CNVD
Glioblastoma multiforme	21080181	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Phyllodes tumor	17334353	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Pancreatic endocrine tumor	17639061	CNVD
Gastric cancer	17908304	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Medulloblastoma	21979893	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Thoracic aortic aneurysm	21092924	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Ewing''s sarcoma	17952124	CNVD
Oral cancer	21386901	CNVD
Breast cancer	21785460	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Prostate cancer	18632612	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21858162	CNVD
Breast cancer	21364760	CNVD
Acute lymphoblastic leukemia	20724749	CNVD
Autism	22495311	CNVD
Renal cell carcinoma	18765545	CNVD
lymphocytic leukemia	21291569	CNVD
Urothelial cell carcinoma	18451213	CNVD
Myelofibrosis	22110671	CNVD
Glioblastoma multiforme	22286061	CNVD
Myxofibrosarcoma	16751306	CNVD
Non-muscle invasive bladder neoplasm	19445696	CNVD
Ovarian cancer	22355333	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD

Chromatin state (count:527 , 50 per page) page: 1 2 3 4 5 6 7 ... 11

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:5980800-6017800	Weak transcription	Thymus	Thymus
2	chr10:5986200-6018600	Weak transcription	Aorta	Aorta
3	chr10:5987600-6018000	Weak transcription	Psoas Muscle	Psoas
4	chr10:5987800-6017800	Weak transcription	Fetal Thymus	thymus
5	chr10:5999400-6017600	Weak transcription	Primary B cells from cord blood	blood
6	chr10:6001000-6017400	Weak transcription	NHLF	lung
7	chr10:6002400-6017800	Weak transcription	Placenta	Placenta
8	chr10:6005400-6017400	Weak transcription	Primary hematopoietic stem cells	blood
9	chr10:6005400-6017800	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
10	chr10:6005400-6018000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
11	chr10:6005800-6018200	Weak transcription	Ovary	ovary
12	chr10:6007600-6018200	Weak transcription	Right Ventricle	heart
13	chr10:6008400-6017800	Weak transcription	Skeletal Muscle Male	skeletal muscle
14	chr10:6010800-6017800	Weak transcription	Stomach Smooth Muscle	stomach
15	chr10:6013600-6017000	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
16	chr10:6013600-6017000	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
17	chr10:6013600-6017400	Weak transcription	Left Ventricle	heart
18	chr10:6013600-6018000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
19	chr10:6013800-6016600	Weak transcription	Primary T cells fromperipheralblood	blood
20	chr10:6013800-6016600	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
21	chr10:6013800-6017000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
22	chr10:6013800-6017400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
23	chr10:6013800-6017800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
24	chr10:6014000-6016400	Weak transcription	Primary T helper naive cells from peripheral blood	blood
25	chr10:6014000-6016400	Weak transcription	Primary T helper cells fromperipheralblood	blood
26	chr10:6014000-6017400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
27	chr10:6014000-6017400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
28	chr10:6014000-6017400	Weak transcription	Fetal Intestine Small	intestine
29	chr10:6014000-6017800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
30	chr10:6014000-6017800	Weak transcription	NHEK	skin
31	chr10:6014000-6018000	Weak transcription	Fetal Intestine Large	intestine
32	chr10:6014200-6016600	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
33	chr10:6014200-6016600	Weak transcription	Pancreas	Pancrea
34	chr10:6014200-6017000	Weak transcription	Primary T killer memory cells from peripheral blood	blood
35	chr10:6014200-6017000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
36	chr10:6014200-6017000	Weak transcription	Skeletal Muscle Female	skeletal muscle
37	chr10:6014200-6017200	Weak transcription	Monocytes-CD14+_RO01746	blood
38	chr10:6014200-6017400	Weak transcription	Right Atrium	heart
39	chr10:6014200-6017600	Weak transcription	Spleen	Spleen
40	chr10:6014200-6017800	Weak transcription	Esophagus	oesophagus
41	chr10:6014200-6018000	Weak transcription	Duodenum Smooth Muscle	Duodenum
42	chr10:6014200-6018200	Weak transcription	Gastric	stomach
43	chr10:6014400-6016600	Weak transcription	Primary monocytes fromperipheralblood	blood
44	chr10:6014400-6016600	Weak transcription	Adipose Nuclei	Adipose
45	chr10:6014400-6017000	Weak transcription	Duodenum Mucosa	Duodenum
46	chr10:6014400-6017600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
47	chr10:6014400-6017800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
48	chr10:6014800-6017200	Weak transcription	Colonic Mucosa	Colon
49	chr10:6015000-6017000	Weak transcription	K562	blood
50	chr10:6015000-6017200	Weak transcription	Hela-S3	cervix

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links