Variant report

Variant	nsv894945
Chromosome Location	chr10:21798241-21830104
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:2582)
CpG islands
(count:3358)
Chromatin interactive
region (count:80)
LncRNA
region (count:3)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:2582 , 50 per page) page: 1 2 3 4 5 6 7 ... 52

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr10:21813678-21814937	HepG2	liver:	n/a	n/a
2	ARID3A	chr10:21799762-21799924	HepG2	liver:	n/a	n/a
3	ARID3A	chr10:21816040-21816175	HepG2	liver:	n/a	n/a
4	ARID3A	chr10:21821834-21823211	HepG2	liver:	n/a	chr10:21821959-21821975
5	ARID3A	chr10:21812354-21812704	HepG2	liver:	n/a	n/a
6	ARID3A	chr10:21821685-21822801	K562	blood:	n/a	chr10:21821959-21821975
7	ARID3A	chr10:21816371-21819506	K562	blood:	n/a	n/a
8	ARID3A	chr10:21800269-21800852	HepG2	liver:	n/a	n/a
9	ARID3A	chr10:21815276-21815733	HepG2	liver:	n/a	n/a
10	ARID3A	chr10:21816515-21817289	HepG2	liver:	n/a	n/a
11	ARID3A	chr10:21823618-21823737	HepG2	liver:	n/a	n/a
12	ARID3A	chr10:21813924-21814952	K562	blood:	n/a	n/a
13	ARID3A	chr10:21819804-21820406	K562	blood:	n/a	n/a
14	ATF1	chr10:21814270-21814971	K562	blood:	n/a	n/a
15	ATF2	chr10:21797918-21798445	H1-hESC	embryonic stem cell:	n/a	n/a
16	ATF2	chr10:21814158-21814937	H1-hESC	embryonic stem cell:	n/a	n/a
17	ATF2	chr10:21798035-21798774	H1-hESC	embryonic stem cell:	n/a	n/a
18	ATF2	chr10:21816215-21816907	H1-hESC	embryonic stem cell:	n/a	n/a
19	ATF2	chr10:21813500-21813903	H1-hESC	embryonic stem cell:	n/a	n/a
20	ATF2	chr10:21817133-21817549	H1-hESC	embryonic stem cell:	n/a	n/a
21	ATF2	chr10:21822598-21823160	GM12878	blood:	n/a	n/a
22	ATF2	chr10:21815154-21816181	H1-hESC	embryonic stem cell:	n/a	n/a
23	ATF2	chr10:21822338-21823018	H1-hESC	embryonic stem cell:	n/a	n/a
24	ATF2	chr10:21814412-21814884	H1-hESC	embryonic stem cell:	n/a	n/a
25	ATF3	chr10:21823643-21824014	K562	blood:	n/a	chr10:21823866-21823875 chr10:21823920-21823929
26	ATF3	chr10:21822317-21822869	A549	lung:	n/a	n/a
27	BACH1	chr10:21822460-21822960	H1-hESC	embryonic stem cell:	n/a	n/a
28	BACH1	chr10:21814460-21814752	K562	blood:	n/a	n/a
29	BACH1	chr10:21823919-21823933	H1-hESC	embryonic stem cell:	n/a	n/a
30	BACH1	chr10:21824165-21824172	H1-hESC	embryonic stem cell:	n/a	n/a
31	BACH1	chr10:21814506-21815219	H1-hESC	embryonic stem cell:	n/a	n/a
32	BACH1	chr10:21798321-21798892	H1-hESC	embryonic stem cell:	n/a	n/a
33	BACH1	chr10:21816412-21817030	K562	blood:	n/a	n/a
34	BACH1	chr10:21817424-21817709	H1-hESC	embryonic stem cell:	n/a	n/a
35	BACH1	chr10:21823285-21823320	H1-hESC	embryonic stem cell:	n/a	n/a
36	BACH1	chr10:21818477-21818775	H1-hESC	embryonic stem cell:	n/a	n/a
37	BACH1	chr10:21811191-21811394	K562	blood:	n/a	n/a
38	BCL3	chr10:21822173-21822984	A549	lung:	n/a	n/a
39	BCL3	chr10:21813725-21815247	A549	lung:	n/a	chr10:21814998-21815007 chr10:21815039-21815048 chr10:21814995-21815008 chr10:21814999-21815012 chr10:21815033-21815042
40	BCL3	chr10:21822075-21823068	A549	lung:	n/a	n/a
41	BCL3	chr10:21813799-21815474	A549	lung:	n/a	chr10:21814998-21815007 chr10:21815039-21815048 chr10:21814995-21815008 chr10:21815401-21815410 chr10:21815437-21815450 chr10:21815444-21815457 chr10:21814999-21815012 chr10:21815443-21815452 chr10:21815033-21815042 chr10:21815266-21815279
42	BCL3	chr10:21816361-21817058	A549	lung:	n/a	n/a
43	BCLAF1	chr10:21822164-21823223	GM12878	blood:	n/a	n/a
44	BCLAF1	chr10:21822322-21823212	K562	blood:	n/a	n/a
45	BCLAF1	chr10:21814262-21814858	K562	blood:	n/a	n/a
46	BCLAF1	chr10:21822313-21823196	GM12878	blood:	n/a	n/a
47	BHLHE40	chr10:21798260-21798512	HepG2	liver:	n/a	n/a
48	BHLHE40	chr10:21808465-21808636	GM12878	blood:	n/a	n/a
49	BHLHE40	chr10:21806378-21806764	K562	blood:	n/a	n/a
50	BHLHE40	chr10:21814248-21815607	GM12878	blood:	n/a	chr10:21814887-21814903 chr10:21815069-21815085

(count:3358 , 50 per page) page: 1 2 3 4 5 6 7 ... 68

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr10:21806139-21806189	ProgFib	skin:	n/a
2	chr10:21799395-21799445	SK-N-SH_RA	brain:	n/a
3	chr10:21822977-21823027	ovcar-3	ovarian:	n/a
4	chr10:21806139-21806189	ProgFib	skin:	n/a
5	chr10:21799395-21799445	SK-N-SH_RA	brain:	n/a
6	chr10:21822977-21823027	ovcar-3	ovarian:	n/a
7	chr10:21801394-21801444	HRCEpiC	kidney:	n/a
8	chr10:21807166-21807216	GM19239	blood:	n/a
9	chr10:21814466-21814516	HCM	heart:	n/a
10	chr10:21814388-21814438	HEEpiC	esophagus:	n/a
11	chr10:21802824-21802874	SKMC	muscle:	n/a
12	chr10:21822787-21822837	SK-N-SH_RA	brain:	n/a
13	chr10:21814466-21814516	ProgFib	skin:	n/a
14	chr10:21815683-21815733	AG04450	lung:	fetal
15	chr10:21807166-21807216	NH-A	brain:	n/a
16	chr10:21802824-21802874	PrEC	prostate:	n/a
17	chr10:21814619-21814669	HCF	heart:	n/a
18	chr10:21824407-21824457	HPAEpiC	pulmonary alveolar:	n/a
19	chr10:21824158-21824208	HCT-116	colon:	n/a
20	chr10:21802824-21802874	HCT-116	colon:	n/a
21	chr10:21823437-21823487	HEK293	kidney:	embryo
22	chr10:21823423-21823473	SAEC	small airway:	n/a
23	chr10:21813501-21813551	PANC-1	pancreas:	n/a
24	chr10:21824407-21824457	ProgFib	skin:	n/a
25	chr10:21822303-21822353	GM19239	blood:	n/a
26	chr10:21822303-21822353	NHDF-neo	bronchial:	n/a
27	chr10:21814789-21814839	AG10803	skin:	n/a
28	chr10:21816267-21816317	HIPEpiC	eye:	n/a
29	chr10:21807166-21807216	AG09309	skin:	n/a
30	chr10:21823475-21823525	AG04449	skin:	fetal
31	chr10:21807211-21807261	HEEpiC	esophagus:	n/a
32	chr10:21804965-21805015	GM06990	blood:	n/a
33	chr10:21798698-21798748	Hela-S3	cervix:	n/a
34	chr10:21823423-21823473	AG04449	skin:	fetal
35	chr10:21814793-21814843	GM12892	blood:	n/a
36	chr10:21810105-21810155	AG09319	gingival:	n/a
37	chr10:21824447-21824497	GM12892	blood:	n/a
38	chr10:21814466-21814516	NH-A	brain:	n/a
39	chr10:21815715-21815765	GM12878	blood:	n/a
40	chr10:21816267-21816317	ECC-1	luminal epithelium:	n/a
41	chr10:21814466-21814516	AG09319	gingival:	n/a
42	chr10:21814313-21814363	HCF	heart:	n/a
43	chr10:21799047-21799097	SAEC	small airway:	n/a
44	chr10:21823447-21823497	K562	blood:	n/a
45	chr10:21816408-21816458	PANC-1	pancreas:	n/a
46	chr10:21823297-21823347	H1-hESC	embryonic stem cell:	embryo
47	chr10:21799143-21799193	K562	blood:	n/a
48	chr10:21815683-21815733	HCF	heart:	n/a
49	chr10:21818060-21818110	PFSK-1	brain:	n/a
50	chr10:21823470-21823520	AoSMC	blood vessel:	n/a

(count:80 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr10:21829478..21832840-chr10:21836245..21838660,3	K562	blood:
2	chr10:21814674..21816422-chr10:23343111..23345056,2	K562	blood:
3	chr10:21819973..21822184-chr10:22292181..22294416,2	K562	blood:
4	chr10:21794929..21798874-chr10:21803033..21806226,5	K562	blood:
5	chr10:21817630..21819800-chr10:22242694..22244744,2	K562	blood:
6	chr10:21784774..21789957-chr10:21820858..21826220,9	MCF-7	breast:
7	chr10:21795681..21797336-chr10:21797733..21799271,2	MCF-7	breast:
8	chr10:21559791..21562059-chr10:21814751..21816804,2	MCF-7	breast:
9	chr10:21783306..21788486-chr10:21805319..21811721,9	K562	blood:
10	chr10:21784969..21786893-chr10:21809778..21812672,2	MCF-7	breast:
11	chr10:21817965..21819754-chr10:23342312..23345868,3	K562	blood:
12	chr1:6844565..6845211-chr10:21822402..21823399,2	NB4	blood:
13	chr10:21822263..21825196-chr10:21825343..21829411,7	MCF-7	breast:
14	chr10:21789609..21793052-chr10:21815401..21819121,3	MCF-7	breast:
15	chr10:21783888..21789239-chr10:21811898..21819387,16	K562	blood:
16	chr10:21763967..21765915-chr10:21820410..21823036,2	MCF-7	breast:
17	chr10:21808160..21810754-chr10:22013854..22015934,2	K562	blood:
18	chr10:21793185..21794844-chr10:21800721..21802382,2	K562	blood:
19	chr10:21812847..21814748-chr10:21961916..21964331,2	MCF-7	breast:
20	chr10:21783273..21787177-chr10:21817668..21819902,3	MCF-7	breast:
21	chr10:21820691..21824935-chr10:21826133..21829132,6	MCF-7	breast:
22	chr10:21823004..21824663-chr10:22608853..22611559,3	K562	blood:
23	chr10:21815110..21817816-chr10:21828150..21829882,2	MCF-7	breast:
24	chr10:21461908..21464690-chr10:21814133..21818053,5	MCF-7	breast:
25	chr10:21798837..21800885-chr10:21814411..21817123,2	MCF-7	breast:
26	chr10:21822674..21823308-chr16:68271100..68271892,2	Hela-S3	cervix:
27	chr10:21793213..21796625-chr10:21800997..21804362,3	MCF-7	breast:
28	chr10:21782892..21787980-chr10:21813728..21817191,12	MCF-7	breast:
29	chr10:21783009..21787738-chr10:21813105..21820576,17	MCF-7	breast:
30	chr10:21799042..21801453-chr10:21803205..21806030,4	MCF-7	breast:
31	chr10:21814767..21816695-chr10:22261629..22263190,2	MCF-7	breast:
32	chr10:21815110..21817816-chr10:21828150..21829882,2	MCF-7	breast:
33	chr10:21816369..21819253-chr10:22004806..22007546,2	MCF-7	breast:
34	chr10:21822045..21822922-chr14:50065370..50066027,2	Hela-S3	cervix:
35	chr10:21824380..21826372-chr10:21842074..21844777,3	K562	blood:
36	chr10:21821950..21822940-chr11:65728654..65729654,2	HCT-116	colon:
37	chr10:21799042..21801453-chr10:21803205..21806030,4	MCF-7	breast:
38	chr10:21814692..21817534-chr10:22231739..22234440,2	K562	blood:
39	chr10:21784105..21788419-chr10:21820020..21825934,15	K562	blood:
40	chr10:21796721..21798891-chr10:22659215..22661433,2	K562	blood:
41	chr10:21815270..21816548-chr10:22020978..22021865,3	MCF-7	breast:
42	chr10:21815512..21816376-chr5:102455385..102456116,2	Hela-S3	cervix:
43	chr10:21774235..21777906-chr10:21814589..21817190,3	MCF-7	breast:
44	chr10:21813127..21816333-chr10:22288541..22292562,4	K562	blood:
45	chr10:21813597..21815483-chr6:26030304..26033115,2	K562	blood:
46	chr10:21388866..21391228-chr10:21814884..21816399,2	K562	blood:
47	chr10:21822623..21823131-chr19:49999677..50000261,2	Hela-S3	cervix:
48	chr10:21624338..21627195-chr10:21803332..21806134,2	MCF-7	breast:
49	chr10:21814676..21815419-chr17:6938263..6939169,2	HCT-116	colon:
50	chr10:21813084..21814597-chr10:21884150..21887122,2	K562	blood:

(count:3 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-C10orf114-5	chr10:21810318-21810409	NONHSAT011711
2	lnc-C10orf114-5	chr10:21808437-21808587	NONHSAT011711
3	lnc-C10orf114-5	chr10:21812612-21812824	NONHSAT011711

No data

Variant related genes	Relation type
MLLT10	TF binding region
SKIDA1	TF binding region
MLLT10	CpG island
SKIDA1	CpG island
ENSG00000119403	chromatin interactions
ENSG00000222071	chromatin interactions
ENSG00000175467	chromatin interactions
ENSG00000078403	chromatin interactions
ENSG00000145725	chromatin interactions
ENSG00000251749	chromatin interactions
ENSG00000180592	chromatin interactions
ENSG00000204682	chromatin interactions
ENSG00000207347	chromatin interactions
ENSG00000145723	chromatin interactions
ENSG00000165997	chromatin interactions
ENSG00000237436	chromatin interactions
ENSG00000124693	chromatin interactions
ENSG00000168283	chromatin interactions
ENSG00000136770	chromatin interactions
ENSG00000105193	chromatin interactions
ENSG00000231920	chromatin interactions
ENSG00000165501	chromatin interactions
ENSG00000196235	chromatin interactions
ENSG00000142534	chromatin interactions
ENSG00000261469	chromatin interactions
ENSG00000253459	chromatin interactions
ENSG00000233347	chromatin interactions
ENSG00000152487	chromatin interactions
ENSG00000213741	chromatin interactions
ENSG00000078114	chromatin interactions

Extended variants
information (count: 1015 )
Associated
traits (count: 38 )

Variant overlapped rSNPs/rCNVs (count:1015 , 50 per page) page: 1 2 3 4 5 6 7 ... 21

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs12245121	chr10:21798241-21798242	Active TSS Bivalent/Poised TSS Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs555505539	chr10:21798318-21798319	Active TSS Bivalent/Poised TSS Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
3	rs552835720	chr10:21798329-21798330	Active TSS Bivalent/Poised TSS Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
4	rs574337306	chr10:21798349-21798350	Active TSS Bivalent/Poised TSS Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
5	rs374634065	chr10:21798351-21798352	Active TSS Bivalent/Poised TSS Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
6	rs572395023	chr10:21798434-21798435	Active TSS Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Bivalent Enhancer ZNF genes & repeats Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
7	rs534871245	chr10:21798456-21798457	Active TSS Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Bivalent Enhancer ZNF genes & repeats Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
8	rs541172403	chr10:21798480-21798481	Active TSS Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Bivalent Enhancer ZNF genes & repeats Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
9	rs11012727	chr10:21798498-21798499	Active TSS Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Bivalent Enhancer ZNF genes & repeats Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
10	rs371432793	chr10:21798527-21798528	Active TSS Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Bivalent Enhancer ZNF genes & repeats Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
11	rs543798246	chr10:21798566-21798567	Active TSS Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Bivalent Enhancer ZNF genes & repeats Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
12	rs563661027	chr10:21798571-21798572	Active TSS Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Bivalent Enhancer ZNF genes & repeats Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
13	rs574044015	chr10:21798590-21798591	Active TSS Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Bivalent Enhancer ZNF genes & repeats Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
14	rs368132897	chr10:21798680-21798681	Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Weak transcription Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
15	rs542873531	chr10:21798690-21798691	Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Weak transcription Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
16	rs187337344	chr10:21798722-21798723	Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Weak transcription Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
17	rs555273594	chr10:21798736-21798737	Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Weak transcription Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs528768648	chr10:21798758-21798759	Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Weak transcription Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
19	rs551695788	chr10:21798954-21798955	Active TSS Flanking Active TSS Enhancers Weak transcription Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs532948183	chr10:21798967-21798968	Active TSS Flanking Active TSS Enhancers Weak transcription Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs532790709	chr10:21798993-21798994	Active TSS Flanking Active TSS Enhancers Weak transcription Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
22	rs549732476	chr10:21799021-21799022	Active TSS Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Enhancers Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs569669196	chr10:21799209-21799210	Active TSS Flanking Active TSS Bivalent Enhancer Enhancers Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
24	rs535507736	chr10:21799296-21799297	Active TSS Flanking Active TSS Bivalent Enhancer Enhancers Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs111590906	chr10:21799357-21799358	Active TSS Flanking Active TSS Bivalent Enhancer Enhancers Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs548910648	chr10:21799388-21799389	Active TSS Flanking Active TSS Bivalent Enhancer Enhancers Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs553701356	chr10:21799523-21799524	Active TSS Enhancers Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs565842426	chr10:21799533-21799534	Active TSS Enhancers Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs137969665	chr10:21799555-21799556	Active TSS Enhancers Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs530156782	chr10:21799654-21799655	Active TSS Enhancers Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs11816656	chr10:21799683-21799684	Active TSS Enhancers Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs61556182	chr10:21799713-21799714	Active TSS Enhancers Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs12256551	chr10:21799726-21799727	Active TSS Enhancers Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
34	rs372384990	chr10:21799763-21799764	Active TSS Enhancers Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs144623885	chr10:21799765-21799766	Active TSS Enhancers Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
36	rs558131495	chr10:21799770-21799771	Active TSS Enhancers Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs571544881	chr10:21799774-21799775	Active TSS Enhancers Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
38	rs559601709	chr10:21799801-21799802	Active TSS Flanking Active TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs72794837	chr10:21799877-21799878	Active TSS Flanking Active TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
40	rs79702888	chr10:21799888-21799889	Active TSS Flanking Active TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs532641403	chr10:21799902-21799903	Active TSS Flanking Active TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs546252388	chr10:21799912-21799913	Active TSS Flanking Active TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs543067081	chr10:21799922-21799923	Active TSS Flanking Active TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs190682160	chr10:21799932-21799933	Active TSS Flanking Active TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
45	rs146795818	chr10:21799972-21799973	Active TSS Flanking Active TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
46	rs140327430	chr10:21799983-21799984	Active TSS Flanking Active TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs150349284	chr10:21799984-21799985	Active TSS Flanking Active TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
48	rs138109940	chr10:21800034-21800035	Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
49	rs566589260	chr10:21800071-21800072	Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
50	rs541505207	chr10:21800112-21800113	Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:38)

Disease	PMID	Source
Breast cancer	17133270	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Breast cancer	17603634	CNVD
Endometrial cancer	22040021	CNVD
Glioblastoma multiforme	21080181	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Phyllodes tumor	17334353	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Pancreatic endocrine tumor	17639061	CNVD
Gastric cancer	17908304	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Medulloblastoma	21979893	CNVD
Melanoma	18172304	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
Lung cancer	18438408	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Ewing''s sarcoma	17952124	CNVD
Oral cancer	21386901	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21858162	CNVD
Acute lymphoblastic leukemia	20724749	CNVD
Autism	22495311	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Intracranial aneurysm	16715129	CNVD
Multiple myeloma	16616336	CNVD
T-cell lymphomas	19863542	CNVD
Esophageal cancer	21851588	CNVD
small cell lung cancer	20016488	CNVD
Olfactory neuroblastoma	18408657	CNVD
Breast cancer	21364760	CNVD
Glioblastoma multiforme	21525872	CNVD
Intracranial arachnoid cysts	20187927	CNVD
Breast cancer	22522925	CNVD
Cancer	17440070	CNVD

Chromatin state (count:2801 , 50 per page) page: 1 2 3 4 5 6 7 ... 57

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:21789800-21799800	Weak transcription	Lung	lung
2	chr10:21794600-21799000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
3	chr10:21795000-21799000	Weak transcription	Left Ventricle	heart
4	chr10:21795200-21798400	Bivalent Enhancer	Fetal Thymus	thymus
5	chr10:21795200-21799000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
6	chr10:21795400-21798600	Weak transcription	Fetal Intestine Small	intestine
7	chr10:21795600-21799000	Enhancers	Placenta	Placenta
8	chr10:21795800-21799600	Enhancers	HepG2	liver
9	chr10:21795800-21799800	Enhancers	Fetal Heart	heart
10	chr10:21795800-21799800	Weak transcription	A549	lung
11	chr10:21796000-21798800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
12	chr10:21796000-21798800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
13	chr10:21796400-21801000	Weak transcription	K562	blood
14	chr10:21796600-21799000	Weak transcription	Primary neutrophils fromperipheralblood	blood
15	chr10:21796600-21799000	Enhancers	Fetal Lung	lung
16	chr10:21796800-21798400	Weak transcription	Right Atrium	heart
17	chr10:21796800-21800000	Active TSS	ES-WA7 Cell Line	embryonic stem cell
18	chr10:21796800-21801000	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
19	chr10:21797000-21798400	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
20	chr10:21797000-21798400	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
21	chr10:21797000-21798400	Bivalent Enhancer	Fetal Brain Male	brain
22	chr10:21797000-21798600	Bivalent Enhancer	Fetal Stomach	stomach
23	chr10:21797000-21800000	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
24	chr10:21797200-21798800	Flanking Active TSS	Fetal Muscle Leg	muscle
25	chr10:21797200-21799800	Active TSS	H9 Cell Line	embryonic stem cell
26	chr10:21797200-21800200	Active TSS	ES-I3 Cell Line	embryonic stem cell
27	chr10:21797400-21798600	Enhancers	Fetal Muscle Trunk	muscle
28	chr10:21797400-21800200	Active TSS	HUES48 Cell Line	embryonic stem cell
29	chr10:21797400-21806600	Active TSS	Fetal Brain Female	brain
30	chr10:21797600-21798600	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
31	chr10:21797600-21799800	Active TSS	iPS-15b Cell Line	embryonic stem cell
32	chr10:21797800-21798400	Flanking Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
33	chr10:21797800-21798800	Flanking Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
34	chr10:21797800-21798800	Enhancers	Primary hematopoietic stem cells	blood
35	chr10:21797800-21798800	Enhancers	Cortex derived primary cultured neurospheres	brain
36	chr10:21797800-21798800	Enhancers	NH-A	brain
37	chr10:21797800-21799000	Flanking Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
38	chr10:21797800-21799000	Enhancers	Placenta Amnion	Placenta Amnion
39	chr10:21798000-21798400	Flanking Active TSS	Fetal Kidney	kidney
40	chr10:21798000-21798800	Flanking Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
41	chr10:21798000-21799000	Flanking Active TSS	iPS-18 Cell Line	embryonic stem cell
42	chr10:21798200-21798400	Bivalent/Poised TSS	H1 Cell Line	embryonic stem cell
43	chr10:21798200-21798400	Flanking Bivalent TSS/Enh	iPS-20b Cell Line	embryonic stem cell
44	chr10:21798200-21798400	Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
45	chr10:21798200-21798400	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
46	chr10:21798200-21798600	Flanking Active TSS	HUES6 Cell Line	embryonic stem cell
47	chr10:21798200-21798600	Flanking Active TSS	HUES64 Cell Line	embryonic stem cell
48	chr10:21798200-21798600	Enhancers	Brain Hippocampus Middle	brain
49	chr10:21798200-21798800	Flanking Active TSS	Liver	Liver
50	chr10:21798200-21798800	Enhancers	Brain Angular Gyrus	brain

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