Variant report

Variant	nsv895361
Chromosome Location	chr10:49059803-49333393
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:656)
CpG islands
(count:122)
Chromatin interactive
region (count:0)
LncRNA
region (count:8)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:656 , 50 per page) page: 1 2 3 4 5 6 7 ... 14

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	BHLHE40	chr10:49080042-49080383	HepG2	liver:	n/a	n/a
2	BRCA1	chr10:49199990-49200190	Hela-S3	cervix:	n/a	n/a
3	CBX3	chr10:49249785-49250052	K562	blood:	n/a	n/a
4	CEBPB	chr10:49199799-49200207	Hela-S3	cervix:	n/a	chr10:49199988-49199999
5	CEBPB	chr10:49068108-49068463	K562	blood:	n/a	n/a
6	CEBPB	chr10:49199814-49200190	A549	lung:	n/a	chr10:49199988-49199999
7	CEBPB	chr10:49197254-49197290	Hela-S3	cervix:	n/a	n/a
8	CEBPB	chr10:49199984-49200016	HepG2	liver:	n/a	chr10:49199988-49199999
9	CEBPB	chr10:49272320-49272583	K562	blood:	n/a	n/a
10	CEBPB	chr10:49068168-49068380	K562	blood:	n/a	n/a
11	CEBPD	chr10:49245923-49246196	K562	blood:	n/a	n/a
12	CHD2	chr10:49199811-49200185	Hela-S3	cervix:	n/a	chr10:49199901-49199911
13	CTCF	chr10:49060704-49060762	LNCaP	prostate:	n/a	n/a
14	CTCF	chr10:49272391-49272606	GM20000	blood:	n/a	n/a
15	CTCF	chr10:49259675-49259829	LNCaP	prostate:	n/a	n/a
16	CTCF	chr10:49304272-49304410	Lung_OC	lung:	n/a	n/a
17	CTCF	chr10:49296294-49296400	Hela-S3	cervix:	n/a	chr10:49296342-49296363 chr10:49296347-49296365
18	CTCF	chr10:49310414-49310507	GM13976	blood:	n/a	n/a
19	CTCF	chr10:49082610-49082656	GM13976	blood:	n/a	n/a
20	CTCF	chr10:49085208-49085499	GM10266	blood:	n/a	chr10:49085357-49085366
21	CTCF	chr10:49242573-49242599	GM13976	blood:	n/a	n/a
22	CTCF	chr10:49296229-49296484	LNCaP	prostate:	n/a	chr10:49296342-49296363 chr10:49296347-49296365
23	CTCF	chr10:49316766-49316812	Spleen_OC	spleen:	n/a	n/a
24	CTCF	chr10:49272133-49272822	A549	lung:	n/a	n/a
25	CTCF	chr10:49085287-49085458	GM13976	blood:	n/a	chr10:49085357-49085366
26	CTCF	chr10:49072067-49072123	Lung_OC	lung:	n/a	n/a
27	CTCF	chr10:49084734-49084786	GM13976	blood:	n/a	n/a
28	CTCF	chr10:49283350-49283440	Spleen_OC	spleen:	n/a	n/a
29	CTCF	chr10:49296306-49296385	MCF-7	breast:	n/a	chr10:49296342-49296363 chr10:49296347-49296365
30	CTCF	chr10:49311815-49311864	Kidney_OC	kidney:	n/a	n/a
31	CTCF	chr10:49085253-49085485	LNCaP	prostate:	n/a	chr10:49085357-49085366
32	CTCF	chr10:49302730-49302762	Lung_OC	lung:	n/a	n/a
33	CTCF	chr10:49277990-49277995	Medullo	brain:	n/a	n/a
34	CTCF	chr10:49259515-49259904	A549	lung:	n/a	n/a
35	CTCF	chr10:49083476-49083569	Medullo	brain:	n/a	n/a
36	CTCF	chr10:49092925-49092927	LNCaP	prostate:	n/a	n/a
37	CTCF	chr10:49290746-49290806	GM10266	blood:	n/a	n/a
38	CTCF	chr10:49085197-49085500	GM13977	blood:	n/a	chr10:49085357-49085366
39	CTCF	chr10:49291010-49291108	GM20000	blood:	n/a	n/a
40	CTCF	chr10:49307703-49307753	GM13976	blood:	n/a	n/a
41	CTCF	chr10:49197016-49197036	GM13976	blood:	n/a	n/a
42	CTCF	chr10:49272400-49272640	GM13977	blood:	n/a	n/a
43	CTCF	chr10:49085271-49085474	GM10248	blood:	n/a	chr10:49085357-49085366
44	CTCF	chr10:49088148-49088221	GM20000	blood:	n/a	n/a
45	CTCF	chr10:49296168-49296494	A549	lung:	n/a	chr10:49296342-49296363 chr10:49296347-49296365
46	CTCF	chr10:49310785-49310798	Spleen_OC	spleen:	n/a	n/a
47	CTCF	chr10:49085278-49085477	GM20000	blood:	n/a	chr10:49085357-49085366
48	CTCF	chr10:49081524-49081621	Medullo	brain:	n/a	n/a
49	CTCF	chr10:49296097-49296533	A549	lung:	n/a	chr10:49296342-49296363 chr10:49296347-49296365
50	CTCF	chr10:49272788-49272900	GM20000	blood:	n/a	n/a

(count:122 , 50 per page) page: 1 2 3

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr10:49205543-49205593	K562	blood:	n/a
2	chr10:49218579-49218629	AoSMC	blood vessel:	n/a
3	chr10:49218579-49218629	HIPEpiC	eye:	n/a
4	chr10:49218579-49218629	RPTEC	kidney:	n/a
5	chr10:49218579-49218629	GM06990	blood:	n/a
6	chr10:49205543-49205593	HEK293	kidney:	embryo
7	chr10:49218579-49218629	T-47D	breast:	n/a
8	chr10:49218579-49218629	HMEC	breast:	n/a
9	chr10:49218579-49218629	BE2_C	brain:	n/a
10	chr10:49205543-49205593	HAEpiC	amniotic membrane:	n/a
11	chr10:49218579-49218629	PANC-1	pancreas:	n/a
12	chr10:49218579-49218629	ProgFib	skin:	n/a
13	chr10:49205543-49205593	CMK	blood:	n/a
14	chr10:49205543-49205593	SK-N-SH_RA	brain:	n/a
15	chr10:49205543-49205593	GM12878	blood:	n/a
16	chr10:49205543-49205593	AG10803	skin:	n/a
17	chr10:49218579-49218629	Caco-2	colon:	n/a
18	chr10:49218579-49218629	NB4	blood:	n/a
19	chr10:49218579-49218629	HL-60	blood:	n/a
20	chr10:49218579-49218629	BJ	skin:	n/a
21	chr10:49205543-49205593	T-47D	breast:	n/a
22	chr10:49205543-49205593	HCT-116	colon:	n/a
23	chr10:49218579-49218629	CMK	blood:	n/a
24	chr10:49205543-49205593	AG04449	skin:	fetal
25	chr10:49218579-49218629	HCPEpiC	choroid plexus:	n/a
26	chr10:49205543-49205593	HEEpiC	esophagus:	n/a
27	chr10:49218579-49218629	HNPCEpiC	eye:	n/a
28	chr10:49218579-49218629	NT2-D1	testis:	n/a
29	chr10:49218579-49218629	Jurkat	blood:	n/a
30	chr10:49205543-49205593	H1-hESC	embryonic stem cell:	embryo
31	chr10:49205543-49205593	MCF-7	breast:	n/a
32	chr10:49218579-49218629	Hela-S3	cervix:	n/a
33	chr10:49205543-49205593	HCF	heart:	n/a
34	chr10:49218579-49218629	SAEC	small airway:	n/a
35	chr10:49218579-49218629	HAEpiC	amniotic membrane:	n/a
36	chr10:49205543-49205593	ovcar-3	ovarian:	n/a
37	chr10:49218579-49218629	NHBE	bronchial:	n/a
38	chr10:49205543-49205593	HMEC	breast:	n/a
39	chr10:49205543-49205593	A549	lung:	n/a
40	chr10:49218579-49218629	GM12892	blood:	n/a
41	chr10:49218579-49218629	PrEC	prostate:	n/a
42	chr10:49218579-49218629	HCT-116	colon:	n/a
43	chr10:49205543-49205593	SK-N-MC	brain:	n/a
44	chr10:49205543-49205593	MCF10A-Er-Src	breast:	n/a
45	chr10:49218579-49218629	AG10803	skin:	n/a
46	chr10:49205543-49205593	HIPEpiC	eye:	n/a
47	chr10:49218579-49218629	H1-hESC	embryonic stem cell:	embryo
48	chr10:49205543-49205593	NH-A	brain:	n/a
49	chr10:49205543-49205593	PANC-1	pancreas:	n/a
50	chr10:49205543-49205593	LNCaP	prostate:	n/a

No data

(count:8 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-FAM25C-1	chr10:49199649-49199824	NONHSAT013257
2	lnc-MAPK8-6	chr10:49313937-49314716	expReg_chr10_2502_+
3	lnc-FAM25C-1	chr10:49195626-49195779	NONHSAT013256
4	lnc-FAM25C-1	chr10:49199717-49199881	NONHSAT013256
5	lnc-MAPK8-5	chr10:49316927-49317254	expReg_chr10_2514_+
6	lnc-FAM25C-3	chr10:49090136-49090419	NONHSAT013255
7	lnc-FAM25C-1	chr10:49205711-49205776	NONHSAT013257
8	lnc-PTPN20B-1	chr10:49244690-49248867	NONHSAT013237

No data

Variant related genes	Relation type
FAM25C	TF binding region
BMS1P7	TF binding region
RNA5SP315	TF binding region
PTPN20CP	TF binding region
RN7SL527P	TF binding region
FAM35EP	TF binding region
CTGLF12P	TF binding region
FAM25C	CpG island
BMS1P7	CpG island
RNA5SP315	CpG island
PTPN20CP	CpG island
RN7SL527P	CpG island
FAM35EP	CpG island
CTGLF12P	CpG island

Extended variants
information (count: 532 )
Associated
traits (count: 80 )

Variant overlapped rSNPs/rCNVs (count:532 , 50 per page) page: 1 2 3 4 5 6 7 ... 11

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs60383427	chr10:49085107-49085108	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
2	rs375529520	chr10:49085191-49085192	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
3	rs12259364	chr10:49085208-49085209	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
4	rs59330201	chr10:49085228-49085229	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
5	rs57832763	chr10:49085252-49085253	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
6	rs9422159	chr10:49085259-49085260	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
7	rs3128001	chr10:49091678-49091679	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
8	rs112014580	chr10:49195693-49195694	Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
9	rs2942974	chr10:49195745-49195746	Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
10	rs113621971	chr10:49196518-49196519	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs553183189	chr10:49196526-49196527	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs573334332	chr10:49196534-49196535	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs534066840	chr10:49196629-49196630	Weak transcription Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
14	rs558479373	chr10:49196744-49196745	Weak transcription Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
15	rs372487848	chr10:49196827-49196828	Weak transcription Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
16	rs191299693	chr10:49196918-49196919	Weak transcription Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
17	rs563489034	chr10:49196943-49196944	Weak transcription Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
18	rs575317857	chr10:49196955-49196956	Weak transcription Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
19	rs377636710	chr10:49197048-49197049	Weak transcription Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
20	rs551911279	chr10:49197102-49197103	Weak transcription Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
21	rs4376859	chr10:49197135-49197136	Weak transcription Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
22	rs561304511	chr10:49197144-49197145	Weak transcription Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
23	rs528782065	chr10:49197157-49197158	Weak transcription Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
24	rs3013876	chr10:49197162-49197163	Weak transcription Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
25	rs374801342	chr10:49197175-49197176	Weak transcription Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
26	rs565568544	chr10:49197211-49197212	Weak transcription Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
27	rs541576240	chr10:49197230-49197231	Weak transcription Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
28	rs3013943	chr10:49197247-49197248	Weak transcription Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
29	rs5024172	chr10:49197266-49197267	Weak transcription Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
30	rs551172692	chr10:49197274-49197275	Weak transcription Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
31	rs569008397	chr10:49197306-49197307	Weak transcription Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
32	rs529761927	chr10:49197347-49197348	Weak transcription Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
33	rs71227478	chr10:49197395-49197396	Weak transcription Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
34	rs200397335	chr10:49197411-49197412	Weak transcription Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
35	rs113620327	chr10:49197412-49197413	Weak transcription Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
36	rs373147002	chr10:49197436-49197437	Weak transcription Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
37	rs199611384	chr10:49197482-49197483	Weak transcription Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
38	rs566416531	chr10:49197485-49197486	Weak transcription Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
39	rs533856142	chr10:49197661-49197662	Weak transcription Enhancers Active TSS Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
40	rs561552796	chr10:49197668-49197669	Weak transcription Enhancers Active TSS Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
41	rs74877855	chr10:49197683-49197684	Weak transcription Enhancers Active TSS Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
42	rs117795521	chr10:49197726-49197727	Weak transcription Enhancers Active TSS Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
43	rs558855614	chr10:49197736-49197737	Weak transcription Enhancers Active TSS Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
44	rs184561844	chr10:49197742-49197743	Weak transcription Enhancers Active TSS Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
45	rs4838401	chr10:49197781-49197782	Weak transcription Enhancers Active TSS Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
46	rs4838579	chr10:49197789-49197790	Weak transcription Enhancers Active TSS Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
47	rs537678999	chr10:49197861-49197862	Enhancers Weak transcription Active TSS Transcr. at gene 5' and 3' Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
48	rs3013942	chr10:49197876-49197877	Enhancers Weak transcription Active TSS Transcr. at gene 5' and 3' Flanking Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
49	rs3013941	chr10:49197881-49197882	Enhancers Weak transcription Active TSS Transcr. at gene 5' and 3' Flanking Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
50	rs117223728	chr10:49197926-49197927	Enhancers Weak transcription Active TSS Transcr. at gene 5' and 3' Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:80)

Disease	PMID	Source
Pancreatic endocrine tumor	17639061	CNVD
Gastric cancer	17908304	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Medulloblastoma	21979893	CNVD
Melanoma	18172304	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Ewing''s sarcoma	17952124	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	20724749	CNVD
Autism	22495311	CNVD
Esophageal cancer	21851588	CNVD
Prostate cancer	18632612	CNVD
Autism	18414403	CNVD
Cockayne syndrome	18421352	CNVD
Glioblastoma	16823260	CNVD
Medulloblastoma	16968546	CNVD
Neuroblastoma	17533364	CNVD
Cancer	21183584	CNVD
T-cell lymphomas	19863542	CNVD
Testicular germ cell tumor	18059402	CNVD
Squamous cell cancer	21044232	CNVD
Glioma	21971842	CNVD
Cancer	21637783	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Colorectal cancer	20709793	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Liposarcoma	21253554	CNVD
Oligodendroglial tumors	17285580	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Papillary thyroid carcinoma	21436994	CNVD
Hirschsprung''s Disease	21712996	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Obesity	21956041	CNVD
Renal cell carcinoma	18765545	CNVD
Developmental delay	21948486	CNVD
Dysmorphic features	21948486	CNVD
Epilepsy	21948486	CNVD
Breast cancer	21785460	CNVD
Intellectual disability	21948486	CNVD
Schizophrenia	23813976	CNVD
Acute myeloid leukemia	19651601	CNVD
Breast cancer	20409316	CNVD
Breast cancer	21990379	CNVD
Myelofibrosis	22110671	CNVD
Rett syndrome	21593744	CNVD
Glioblastoma multiforme	22286061	CNVD
Neuroblastoma	21899760	CNVD
Intellectual disability	22045946	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Autism	21948486	CNVD
cleft palate	21948486	CNVD
Encephalopathy	21948486	CNVD
Lung cancer	18438408	CNVD
T-cell primary immunodeficiency	21948486	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Autism	22543975	CNVD
Breast cancer	21364760	CNVD
Developmental delay	21147756	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
small cell lung cancer	20016488	CNVD
skeletal anomalies	21948486	CNVD
speech delay	21948486	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD

Chromatin state (count:79 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:49195600-49195800	Enhancers	NHEK	skin
2	chr10:49195800-49196000	Enhancers	A549	lung
3	chr10:49195800-49197000	Weak transcription	NHEK	skin
4	chr10:49196000-49197000	Weak transcription	A549	lung
5	chr10:49196400-49196600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
6	chr10:49196400-49196600	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
7	chr10:49196400-49197600	Enhancers	HMEC	breast
8	chr10:49196600-49197800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
9	chr10:49196600-49197800	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
10	chr10:49196600-49198200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
11	chr10:49196600-49200800	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
12	chr10:49196600-49201600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
13	chr10:49197000-49197200	Enhancers	Hela-S3	cervix
14	chr10:49197000-49197600	Enhancers	A549	lung
15	chr10:49197000-49197800	Active TSS	NHEK	skin
16	chr10:49197000-49198200	Enhancers	HUES6 Cell Line	embryonic stem cell
17	chr10:49197000-49198200	Enhancers	Muscle Satellite Cultured Cells	--
18	chr10:49197000-49198200	Enhancers	NH-A	brain
19	chr10:49197200-49197800	Active TSS	Hela-S3	cervix
20	chr10:49197600-49198000	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
21	chr10:49197600-49198200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
22	chr10:49197600-49198200	Flanking Active TSS	A549	lung
23	chr10:49197600-49198200	Flanking Active TSS	HMEC	breast
24	chr10:49197800-49198000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
25	chr10:49197800-49198000	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
26	chr10:49197800-49198000	Transcr. at gene 5' and 3'	Foreskin Keratinocyte Primary Cells skin03	Skin
27	chr10:49197800-49198000	Transcr. at gene 5' and 3'	NHEK	skin
28	chr10:49197800-49198200	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
29	chr10:49197800-49198200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
30	chr10:49197800-49198200	Enhancers	Liver	Liver
31	chr10:49197800-49198200	Enhancers	Placenta	Placenta
32	chr10:49197800-49198200	Flanking Active TSS	Hela-S3	cervix
33	chr10:49197800-49198200	Enhancers	HSMM	muscle
34	chr10:49197800-49198200	Enhancers	Osteobl	bone
35	chr10:49198000-49198200	Flanking Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
36	chr10:49198000-49199400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
37	chr10:49198000-49200800	Active TSS	NHEK	skin
38	chr10:49198000-49201000	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
39	chr10:49198200-49198400	Active TSS	Hela-S3	cervix
40	chr10:49198200-49198400	Active TSS	HMEC	breast
41	chr10:49198200-49199000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
42	chr10:49198200-49199400	Weak transcription	Liver	Liver
43	chr10:49198200-49199400	Weak transcription	A549	lung
44	chr10:49198200-49201600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
45	chr10:49198400-49198600	Weak transcription	Hela-S3	cervix
46	chr10:49198400-49198600	Weak transcription	HMEC	breast
47	chr10:49198600-49200000	Active TSS	Hela-S3	cervix
48	chr10:49198600-49200000	Active TSS	HMEC	breast
49	chr10:49199000-49199800	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
50	chr10:49199400-49199600	Active TSS	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links