Variant report

Variant	nsv897759
Chromosome Location	chr11:65543827-65554502
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1045)
CpG islands
(count:1839)
Chromatin interactive
region (count:69)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1045 , 50 per page) page: 1 2 3 4 5 6 7 ... 21

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr11:65547486-65547674	HepG2	liver:	n/a	n/a
2	ATF2	chr11:65547304-65547708	H1-hESC	embryonic stem cell:	n/a	n/a
3	ATF2	chr11:65547447-65547749	GM12878	blood:	n/a	n/a
4	ATF2	chr11:65547319-65547809	H1-hESC	embryonic stem cell:	n/a	n/a
5	ATF3	chr11:65547390-65547770	H1-hESC	embryonic stem cell:	n/a	n/a
6	ATF3	chr11:65547402-65547756	K562	blood:	n/a	n/a
7	BACH1	chr11:65547458-65547747	H1-hESC	embryonic stem cell:	n/a	n/a
8	BACH1	chr11:65548590-65549184	H1-hESC	embryonic stem cell:	n/a	n/a
9	BACH1	chr11:65553697-65554118	H1-hESC	embryonic stem cell:	n/a	n/a
10	BCL3	chr11:65547281-65548124	A549	lung:	n/a	chr11:65547639-65547652 chr11:65547933-65547942 chr11:65547530-65547538 chr11:65548101-65548114 chr11:65547570-65547583 chr11:65547443-65547456
11	BCLAF1	chr11:65547276-65547833	GM12878	blood:	n/a	chr11:65547639-65547652 chr11:65547530-65547538 chr11:65547570-65547583 chr11:65547443-65547456
12	BHLHE40	chr11:65547436-65547910	K562	blood:	n/a	chr11:65547662-65547678
13	BHLHE40	chr11:65548238-65548378	K562	blood:	n/a	n/a
14	BHLHE40	chr11:65547457-65547722	GM12878	blood:	n/a	chr11:65547662-65547678
15	BRCA1	chr11:65547567-65547840	Hela-S3	cervix:	n/a	n/a
16	BRCA1	chr11:65547729-65547744	HepG2	liver:	n/a	n/a
17	CBX3	chr11:65548146-65548437	K562	blood:	n/a	n/a
18	CBX3	chr11:65547403-65547701	K562	blood:	n/a	n/a
19	CBX3	chr11:65547325-65547847	K562	blood:	n/a	n/a
20	CCNT2	chr11:65548185-65548797	K562	blood:	n/a	n/a
21	CCNT2	chr11:65547410-65547932	K562	blood:	n/a	n/a
22	CEBPB	chr11:65543730-65544131	HepG2	liver:	n/a	n/a
23	CEBPB	chr11:65543796-65544031	IMR90	lung:	n/a	n/a
24	CEBPB	chr11:65547211-65547571	HepG2	liver:	n/a	n/a
25	CEBPB	chr11:65547072-65547738	MCF-7	breast:	n/a	n/a
26	CEBPB	chr11:65547265-65547507	HepG2	liver:	n/a	n/a
27	CEBPB	chr11:65543859-65543993	A549	lung:	n/a	n/a
28	CEBPB	chr11:65547121-65547733	MCF-7	breast:	n/a	n/a
29	CEBPB	chr11:65547182-65547696	K562	blood:	n/a	n/a
30	CEBPB	chr11:65547231-65547480	K562	blood:	n/a	n/a
31	CEBPB	chr11:65543831-65543968	Hela-S3	cervix:	n/a	n/a
32	CEBPB	chr11:65547152-65547623	A549	lung:	n/a	n/a
33	CEBPB	chr11:65543740-65544167	MCF-7	breast:	n/a	n/a
34	CEBPB	chr11:65543727-65544135	HepG2	liver:	n/a	n/a
35	CEBPB	chr11:65547211-65547575	IMR90	lung:	n/a	n/a
36	CEBPB	chr11:65547103-65547575	K562	blood:	n/a	n/a
37	CEBPB	chr11:65547209-65547678	HepG2	liver:	n/a	n/a
38	CEBPB	chr11:65547080-65547832	A549	lung:	n/a	n/a
39	CEBPB	chr11:65547221-65547569	A549	lung:	n/a	n/a
40	CEBPB	chr11:65547203-65547755	Hela-S3	cervix:	n/a	n/a
41	CEBPB	chr11:65548269-65548384	Hela-S3	cervix:	n/a	n/a
42	CEBPB	chr11:65547295-65547503	HepG2	liver:	n/a	n/a
43	CEBPB	chr11:65547196-65547650	H1-hESC	embryonic stem cell:	n/a	n/a
44	CEBPB	chr11:65543808-65544017	HepG2	liver:	n/a	n/a
45	CEBPD	chr11:65548940-65549176	HepG2	liver:	n/a	n/a
46	CEBPD	chr11:65548221-65548505	HepG2	liver:	n/a	n/a
47	CHD1	chr11:65547178-65549164	IMR90	lung:	n/a	chr11:65548999-65549009
48	CHD1	chr11:65547480-65547757	GM12878	blood:	n/a	n/a
49	CHD2	chr11:65547429-65547646	K562	blood:	n/a	n/a
50	CHD2	chr11:65547485-65547711	Hela-S3	cervix:	n/a	n/a

(count:1839 , 50 per page) page: 1 2 3 4 5 6 7 ... 37

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr11:65545808-65545858	GM12892	blood:	n/a
2	chr11:65548028-65548078	AG04450	lung:	fetal
3	chr11:65554385-65554435	NHDF-neo	bronchial:	n/a
4	chr11:65548028-65548078	SAEC	small airway:	n/a
5	chr11:65545237-65545287	HCM	heart:	n/a
6	chr11:65554356-65554406	H1-hESC	embryonic stem cell:	embryo
7	chr11:65554042-65554092	HRCEpiC	kidney:	n/a
8	chr11:65554175-65554225	HCF	heart:	n/a
9	chr11:65547172-65547222	HRCEpiC	kidney:	n/a
10	chr11:65545808-65545858	GM12892	blood:	n/a
11	chr11:65548028-65548078	AG04450	lung:	fetal
12	chr11:65554385-65554435	NHDF-neo	bronchial:	n/a
13	chr11:65548028-65548078	SAEC	small airway:	n/a
14	chr11:65545237-65545287	HCM	heart:	n/a
15	chr11:65554356-65554406	H1-hESC	embryonic stem cell:	embryo
16	chr11:65554042-65554092	HRCEpiC	kidney:	n/a
17	chr11:65554175-65554225	HCF	heart:	n/a
18	chr11:65547172-65547222	HRCEpiC	kidney:	n/a
19	chr11:65547172-65547222	HCF	heart:	n/a
20	chr11:65546557-65546607	HPAEpiC	pulmonary alveolar:	n/a
21	chr11:65547881-65547931	AG09319	gingival:	n/a
22	chr11:65547172-65547222	HCT-116	colon:	n/a
23	chr11:65545808-65545858	BE2_C	brain:	n/a
24	chr11:65554398-65554448	PrEC	prostate:	n/a
25	chr11:65545237-65545287	GM12878	blood:	n/a
26	chr11:65547023-65547073	MCF-7	breast:	n/a
27	chr11:65546557-65546607	NT2-D1	testis:	n/a
28	chr11:65547049-65547099	AG09309	skin:	n/a
29	chr11:65547889-65547939	NHDF-neo	bronchial:	n/a
30	chr11:65547886-65547936	GM06990	blood:	n/a
31	chr11:65554042-65554092	HCT-116	colon:	n/a
32	chr11:65554042-65554092	SAEC	small airway:	n/a
33	chr11:65547889-65547939	AG10803	skin:	n/a
34	chr11:65554410-65554460	NT2-D1	testis:	n/a
35	chr11:65554356-65554406	HL-60	blood:	n/a
36	chr11:65546210-65546260	ECC-1	luminal epithelium:	n/a
37	chr11:65547172-65547222	PFSK-1	brain:	n/a
38	chr11:65554042-65554092	AG04450	lung:	fetal
39	chr11:65546557-65546607	HMEC	breast:	n/a
40	chr11:65547948-65547998	NHBE	bronchial:	n/a
41	chr11:65547886-65547936	AoSMC	blood vessel:	n/a
42	chr11:65554042-65554092	BJ	skin:	n/a
43	chr11:65553761-65553811	HCM	heart:	n/a
44	chr11:65554404-65554454	BJ	skin:	n/a
45	chr11:65549260-65549310	SKMC	muscle:	n/a
46	chr11:65545949-65545999	T-47D	breast:	n/a
47	chr11:65553119-65553169	GM12878	blood:	n/a
48	chr11:65554410-65554460	HEK293	kidney:	embryo
49	chr11:65546210-65546260	Jurkat	blood:	n/a
50	chr11:65554042-65554092	AG09319	gingival:	n/a

(count:69 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr11:65549748..65553562-chr11:65663861..65667886,4	K562	blood:
2	chr11:65381741..65384368-chr11:65551453..65554074,4	MCF-7	breast:
3	chr11:65484089..65489642-chr11:65545405..65550834,8	K562	blood:
4	chr11:65553824..65556845-chr11:65623477..65626342,3	K562	blood:
5	chr11:65545110..65546921-chr11:65587302..65589568,2	MCF-7	breast:
6	chr1:226250116..226250813-chr11:65547403..65548054,2	Hela-S3	cervix:
7	chr11:65484089..65489445-chr11:65545173..65550834,9	K562	blood:
8	chr11:65552279..65555050-chr11:65558664..65561977,4	K562	blood:
9	chr11:65546756..65549287-chr11:65665395..65667925,3	K562	blood:
10	chr11:65550550..65552116-chr11:65570542..65573431,2	MCF-7	breast:
11	chr11:65543427..65545699-chr11:65553681..65556951,3	K562	blood:
12	chr11:65318195..65320071-chr11:65547732..65549881,2	K562	blood:
13	chr11:65481897..65483713-chr11:65546531..65549436,2	K562	blood:
14	chr11:65381719..65383349-chr11:65554196..65557028,2	MCF-7	breast:
15	chr11:65547412..65548155-chr11:65560456..65561079,2	K562	blood:
16	chr11:65547331..65547857-chr11:65584018..65584938,2	MCF-7	breast:
17	chr11:65478523..65481403-chr11:65546217..65549249,4	K562	blood:
18	chr11:65547235..65549033-chr11:65639667..65642031,2	K562	blood:
19	chr11:65552272..65555849-chr11:65684886..65688039,3	MCF-7	breast:
20	chr11:65338114..65341460-chr11:65551554..65554469,3	MCF-7	breast:
21	chr11:65546195..65548031-chr11:65766372..65768235,2	K562	blood:
22	chr11:65478425..65481343-chr11:65547533..65549097,2	MCF-7	breast:
23	chr11:65463670..65466251-chr11:65542574..65544907,2	K562	blood:
24	chr11:65548547..65550111-chr11:65627169..65628682,2	MCF-7	breast:
25	chr11:65545987..65548666-chr11:65554230..65557097,2	K562	blood:
26	chr11:65546319..65548897-chr11:65656816..65659739,4	K562	blood:
27	chr11:65477911..65483635-chr11:65545629..65549670,11	K562	blood:
28	chr11:65551696..65553777-chr11:65562013..65564216,2	K562	blood:
29	chr11:65547324..65548019-chr11:65655670..65656173,2	K562	blood:
30	chr11:65545624..65552162-chr11:65622017..65629334,15	K562	blood:
31	chr11:65549046..65552132-chr11:65553796..65556282,6	K562	blood:
32	chr11:65545830..65548787-chr11:65550897..65553141,2	K562	blood:
33	chr11:65546756..65549287-chr11:65665686..65670324,5	K562	blood:
34	chr11:65545624..65551607-chr11:65624049..65629334,14	K562	blood:
35	chr11:65545480..65548295-chr11:65624014..65629369,5	MCF-7	breast:
36	chr11:65547507..65549362-chr11:65557835..65559340,2	K562	blood:
37	chr11:64949318..64950980-chr11:65546666..65549109,2	MCF-7	breast:
38	chr11:65544951..65562337-chr11:65623093..65630859,34	MCF-7	breast:
39	chr11:65546347..65549308-chr11:65631911..65633845,2	MCF-7	breast:
40	chr11:65487717..65490491-chr11:65548061..65551683,3	MCF-7	breast:
41	chr11:65479523..65484500-chr11:65551483..65556601,5	MCF-7	breast:
42	chr11:65551999..65553570-chr11:65651722..65654050,2	K562	blood:
43	chr11:65546714..65547677-chr11:65557876..65558611,3	MCF-7	breast:
44	chr11:65546164..65550034-chr11:65665205..65668429,3	MCF-7	breast:
45	chr11:65545987..65548666-chr11:65554230..65557097,2	K562	blood:
46	chr11:65526354..65531692-chr11:65541770..65544711,4	K562	blood:
47	chr11:65543425..65544156-chr11:65585413..65586242,2	MCF-7	breast:
48	chr11:65487099..65491310-chr11:65543476..65547938,6	MCF-7	breast:
49	chr11:65509847..65512521-chr11:65541079..65543934,2	K562	blood:
50	chr11:65478772..65479522-chr11:65547566..65548190,2	K562	blood:

No data

Variant related genes	Relation type
OVOL1	TF binding region
ENSG00000175827	TF binding region
AP5B1	TF binding region
OVOL1	CpG island
ENSG00000175827	CpG island
AP5B1	CpG island
ENSG00000175592	chromatin interactions
ENSG00000175550	chromatin interactions
ENSG00000173327	chromatin interactions
ENSG00000172638	chromatin interactions
ENSG00000213445	chromatin interactions
ENSG00000172922	chromatin interactions
ENSG00000172732	chromatin interactions
ENSG00000265874	chromatin interactions
ENSG00000175602	chromatin interactions
ENSG00000173039	chromatin interactions
ENSG00000254470	chromatin interactions
ENSG00000172757	chromatin interactions
ENSG00000175827	chromatin interactions
ENSG00000176973	chromatin interactions
ENSG00000197136	chromatin interactions
ENSG00000173465	chromatin interactions
ENSG00000014216	chromatin interactions
ENSG00000255404	chromatin interactions
ENSG00000172500	chromatin interactions
ENSG00000175376	chromatin interactions
ENSG00000163041	chromatin interactions
ENSG00000168056	chromatin interactions
ENSG00000172977	chromatin interactions
ENSG00000255120	chromatin interactions
ENSG00000172818	chromatin interactions
ENSG00000175573	chromatin interactions

Extended variants
information (count: 511 )
Associated
traits (count: 98 )

Variant overlapped rSNPs/rCNVs (count:511 , 50 per page) page: 1 2 3 4 5 6 7 ... 11

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs10896043	chr11:65543827-65543828	Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs117685945	chr11:65543903-65543904	Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
3	rs550785230	chr11:65543909-65543910	Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
4	rs570671333	chr11:65543915-65543916	Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
5	rs117492546	chr11:65543916-65543917	Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
6	rs541567130	chr11:65543919-65543920	Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
7	rs138506382	chr11:65543951-65543952	Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
8	rs144047419	chr11:65543972-65543973	Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
9	rs535102797	chr11:65543977-65543978	Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
10	rs147327835	chr11:65543985-65543986	Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
11	rs79512802	chr11:65544035-65544036	Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
12	rs574712464	chr11:65544043-65544044	Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
13	rs398097588	chr11:65544044-65544045	Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
14	rs561773660	chr11:65544045-65544046	Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
15	rs180912829	chr11:65544057-65544058	Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
16	rs187253891	chr11:65544066-65544067	Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
17	rs369404098	chr11:65544082-65544083	Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
18	rs557547971	chr11:65544122-65544123	Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
19	rs371769139	chr11:65544148-65544149	Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
20	rs540223442	chr11:65544222-65544223	Weak transcription Genic enhancers Strong transcription ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3' Enhancers	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
21	rs577401984	chr11:65544299-65544300	Weak transcription Genic enhancers Strong transcription ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3' Enhancers	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
22	rs571991136	chr11:65544309-65544310	Weak transcription Genic enhancers Strong transcription ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3' Enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
23	rs546047978	chr11:65544316-65544317	Weak transcription Genic enhancers Strong transcription ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3' Enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
24	rs112563907	chr11:65544325-65544326	Weak transcription Genic enhancers Strong transcription ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3' Enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
25	rs573533982	chr11:65544336-65544337	Weak transcription Genic enhancers Strong transcription ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3' Enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
26	rs542256175	chr11:65544362-65544363	Weak transcription Genic enhancers Strong transcription ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3' Enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
27	rs138996559	chr11:65544366-65544367	Weak transcription Genic enhancers Strong transcription ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3' Enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
28	rs530806093	chr11:65544397-65544398	Weak transcription Genic enhancers Strong transcription ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3' Enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
29	rs377001935	chr11:65544408-65544409	Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
30	rs376246099	chr11:65544414-65544415	Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
31	rs541009129	chr11:65544474-65544475	Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
32	rs548936577	chr11:65544501-65544502	Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
33	rs191966955	chr11:65544538-65544539	Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
34	rs560801021	chr11:65544541-65544542	Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
35	rs532833287	chr11:65544548-65544549	Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
36	rs533166309	chr11:65544559-65544560	Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
37	rs565667514	chr11:65544560-65544561	Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
38	rs546359796	chr11:65544588-65544589	Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
39	rs566433097	chr11:65544625-65544626	Weak transcription Genic enhancers Strong transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Active TSS	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
40	rs369615904	chr11:65544633-65544634	Weak transcription Genic enhancers Strong transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Active TSS	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
41	rs141424706	chr11:65544695-65544696	Weak transcription Genic enhancers Strong transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Active TSS	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
42	rs77787987	chr11:65544706-65544707	Weak transcription Genic enhancers Strong transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Active TSS	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
43	rs568863133	chr11:65544758-65544759	Weak transcription Genic enhancers Strong transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Active TSS	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
44	rs537428979	chr11:65544781-65544782	Weak transcription Genic enhancers Strong transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Active TSS	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
45	rs113195889	chr11:65544790-65544791	Weak transcription Genic enhancers Strong transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Active TSS	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
46	rs77627301	chr11:65544798-65544799	Weak transcription Genic enhancers Strong transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Active TSS	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
47	rs374297007	chr11:65544832-65544833	Weak transcription Genic enhancers Strong transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
48	rs116888179	chr11:65544837-65544838	Weak transcription Genic enhancers Strong transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
49	rs377444504	chr11:65544871-65544872	Weak transcription Genic enhancers Strong transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
50	rs150832077	chr11:65544873-65544874	Weak transcription Genic enhancers Strong transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:98)

Disease	PMID	Source
Medulloblastoma	21979893	CNVD
Gastric cancer	17908304	CNVD
Multiple myeloma	20724749	CNVD
Wilms tumour	21544195	CNVD
Autism	22495311	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Non-small cell lung cancer	21385341	CNVD
Intellectual disability	22102821	CNVD
Glioblastoma multiforme	21138945	CNVD
Acute myeloid leukemia	20729466	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	21637783	CNVD
Acute myeloid leukemia	16864856	CNVD
Chronic lymphocytic leukemia	21795749	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Neuroblastoma	21484798	CNVD
Ewing''s sarcoma	21437220	CNVD
Oral cancer	21386901	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	20837533	CNVD
Breast cancer	21264507	CNVD
Cervical cancer	21063398	CNVD
Glioblastoma multiforme	19960244	CNVD
Liposarcoma	21253554	CNVD
Neuroblastoma	18923524	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Neuroblastoma	17533364	CNVD
Breast cancer	21364760	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Pituitary adenoma	18645599	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Prostate cancer	18632612	CNVD
Glioblastoma multiforme	21080181	CNVD
Smith-Lemli-Opitz syndrome	21572526	CNVD
Multiple myeloma	16461302	CNVD
Cancer	16751803	CNVD
Seminomas	18059402	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Metanephric adenoma	20802469	CNVD
Chordoma	21602918	CNVD
Melanoma	18172304	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
ovarian endometriomas	16273235	CNVD
Breast cancer	16417655	CNVD
Myelofibrosis	22110671	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Prostate cancer	17217626	CNVD
T-cell acute lymphoblastic leukemia	19406988	CNVD
Breast cancer	21045282	CNVD
Breast cancer	21806811	CNVD
Breast cancer	22002566	CNVD
Ductal carcinoma	18381933	CNVD
Retinoblastoma	22278416	CNVD
Breast cancer	20953835	CNVD
oto-dental syndrome	17656375	CNVD
Asthma	21956041	CNVD
Breast cancer	17603634	CNVD
Ovarian neoplasms	16753589	CNVD
Non-small cell lung cancer	20864512	CNVD
Hepatocellular carcinoma	16750200	CNVD
Cervical cancer	21062161	CNVD
Breast cancer	21509527	CNVD
Anaplastic thyroid cancer	18753363	CNVD
Prostate cancer	18779856	CNVD
Cancer	17160897	CNVD
Breast cancer	17001317	CNVD
Oral squamous cell carcinoma	16619035	CNVD
Intracranial aneurysm	16715129	CNVD
Colorectal cancer	16272173	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Esophageal adenocarcinoma	18820669	CNVD
Colorectal cancer	16882699	CNVD
Berardinelli-seip congenital generalized lipodystrophy	17668395	CNVD
Spinal muscular atrophy	17668395	CNVD
Neonatal seizures	17668395	CNVD
Neonatal seizures	17668391	CNVD
Neuroticism	17667963	CNVD
Cancer	17916600	CNVD
Squamous cell cancer	19047905	CNVD
Multiple endocrine neoplasia type 1	19566914	CNVD
XY sex reversal	17503084	CNVD
Berardinelli-seip congenital generalized lipodystrophy	17668391	CNVD
Maculopathy	17646752	CNVD
Breast cancer	17899364	CNVD
Breast cancer	17157792	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Hodgkin''s lymphoma	17606441	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Cancer	20164919	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:1062 , 50 per page) page: 1 2 3 4 5 6 7 ... 22

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:65532600-65544000	Weak transcription	Rectal Mucosa Donor 31	rectum
2	chr11:65534200-65544600	Weak transcription	Osteobl	bone
3	chr11:65537400-65544200	Weak transcription	NHLF	lung
4	chr11:65537400-65544400	Weak transcription	Primary T helper cells fromperipheralblood	blood
5	chr11:65537400-65544400	Weak transcription	Dnd41	blood
6	chr11:65537400-65544600	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
7	chr11:65537400-65544600	Weak transcription	Colon Smooth Muscle	Colon
8	chr11:65537400-65544600	Weak transcription	Rectal Mucosa Donor 29	rectum
9	chr11:65537400-65544800	Weak transcription	Brain Hippocampus Middle	brain
10	chr11:65537400-65545200	Weak transcription	Primary T helper cells PMA-I stimulated	--
11	chr11:65537400-65546600	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
12	chr11:65537400-65546600	Weak transcription	Rectal Smooth Muscle	rectum
13	chr11:65537600-65544200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
14	chr11:65537600-65545000	Weak transcription	Aorta	Aorta
15	chr11:65537600-65546600	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
16	chr11:65537800-65546800	Weak transcription	K562	blood
17	chr11:65538800-65544400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
18	chr11:65539000-65544200	Weak transcription	Brain Inferior Temporal Lobe	brain
19	chr11:65539000-65544200	Weak transcription	Gastric	stomach
20	chr11:65539000-65544400	Weak transcription	H9 Cell Line	embryonic stem cell
21	chr11:65539600-65546600	Weak transcription	Stomach Mucosa	stomach
22	chr11:65540200-65544800	Weak transcription	HUVEC	blood vessel
23	chr11:65540600-65544200	Weak transcription	Primary B cells from peripheral blood	blood
24	chr11:65540600-65545800	Weak transcription	Brain Substantia Nigra	brain
25	chr11:65540800-65544200	Weak transcription	Brain Germinal Matrix	brain
26	chr11:65541000-65544200	Weak transcription	Fetal Thymus	thymus
27	chr11:65541200-65544400	Weak transcription	Fetal Brain Female	brain
28	chr11:65541200-65544600	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
29	chr11:65541400-65544600	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
30	chr11:65541600-65544200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
31	chr11:65541800-65544000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
32	chr11:65541800-65544800	Enhancers	Pancreas	Pancrea
33	chr11:65542000-65544000	Weak transcription	Fetal Muscle Trunk	muscle
34	chr11:65542000-65544800	Weak transcription	Sigmoid Colon	Sigmoid Colon
35	chr11:65542000-65546400	Strong transcription	Fetal Intestine Small	intestine
36	chr11:65542200-65544200	Weak transcription	Fetal Muscle Leg	muscle
37	chr11:65542200-65545200	Strong transcription	Hela-S3	cervix
38	chr11:65542200-65545600	Genic enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
39	chr11:65542200-65546000	Strong transcription	Brain Anterior Caudate	brain
40	chr11:65542200-65546200	Weak transcription	Primary T helper naive cells from peripheral blood	blood
41	chr11:65542200-65546600	Genic enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
42	chr11:65542200-65547000	Strong transcription	A549	lung
43	chr11:65542400-65544000	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
44	chr11:65542400-65544200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
45	chr11:65542400-65544200	Enhancers	Adipose Nuclei	Adipose
46	chr11:65542400-65545000	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
47	chr11:65542400-65545200	Strong transcription	Stomach Smooth Muscle	stomach
48	chr11:65542400-65545400	Genic enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
49	chr11:65542400-65545600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
50	chr11:65542400-65545800	Strong transcription	Brain Cingulate Gyrus	brain

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