Variant report

Variant	nsv897855
Chromosome Location	chr11:67805563-67842369
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1537)
CpG islands
(count:2139)
Chromatin interactive
region (count:60)
LncRNA
region (count:11)
Mature miRNA
region (count: 2)
miRNA target
sites (count:0)

(count:1537 , 50 per page) page: 1 2 3 4 5 6 7 ... 31

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr11:67805561-67806005	HepG2	liver:	n/a	n/a
2	ARID3A	chr11:67807813-67808001	K562	blood:	n/a	n/a
3	ARID3A	chr11:67811036-67811267	K562	blood:	n/a	n/a
4	ATF1	chr11:67811006-67811295	K562	blood:	n/a	n/a
5	ATF2	chr11:67821060-67821436	H1-hESC	embryonic stem cell:	n/a	n/a
6	ATF2	chr11:67819296-67819764	H1-hESC	embryonic stem cell:	n/a	n/a
7	ATF3	chr11:67810920-67811356	K562	blood:	n/a	n/a
8	ATF3	chr11:67810864-67811282	K562	blood:	n/a	n/a
9	BACH1	chr11:67806308-67806435	H1-hESC	embryonic stem cell:	n/a	n/a
10	BACH1	chr11:67823979-67824007	K562	blood:	n/a	n/a
11	BCL11A	chr11:67808100-67808349	GM12878	blood:	n/a	chr11:67808201-67808214 chr11:67808188-67808201
12	BCL11A	chr11:67808063-67808277	GM12878	blood:	n/a	chr11:67808201-67808214 chr11:67808188-67808201
13	BCL3	chr11:67820594-67821083	A549	lung:	n/a	n/a
14	BCL3	chr11:67821223-67821943	A549	lung:	n/a	n/a
15	BCL3	chr11:67820397-67820599	K562	blood:	n/a	n/a
16	BCL3	chr11:67804432-67806447	A549	lung:	n/a	chr11:67805867-67805880 chr11:67805657-67805670 chr11:67804665-67804674 chr11:67806423-67806436 chr11:67804697-67804706
17	BCL3	chr11:67818956-67819512	A549	lung:	n/a	n/a
18	BCL3	chr11:67823741-67824249	A549	lung:	n/a	n/a
19	BCL3	chr11:67822096-67822543	A549	lung:	n/a	n/a
20	BCL3	chr11:67821030-67822597	A549	lung:	n/a	n/a
21	BCL3	chr11:67819240-67819982	GM12878	blood:	n/a	n/a
22	BCLAF1	chr11:67807922-67808429	GM12878	blood:	n/a	chr11:67808201-67808214 chr11:67808188-67808201
23	BCLAF1	chr11:67820601-67821804	GM12878	blood:	n/a	n/a
24	BHLHE40	chr11:67806763-67806838	HepG2	liver:	n/a	n/a
25	BHLHE40	chr11:67810793-67811293	K562	blood:	n/a	chr11:67810967-67810983
26	BHLHE40	chr11:67806262-67807447	K562	blood:	n/a	chr11:67806545-67806561 chr11:67806553-67806569
27	BHLHE40	chr11:67807887-67808420	GM12878	blood:	n/a	chr11:67808188-67808204 chr11:67808196-67808212 chr11:67808193-67808209
28	BHLHE40	chr11:67806324-67807679	GM12878	blood:	n/a	chr11:67806545-67806561 chr11:67806553-67806569
29	BHLHE40	chr11:67820713-67820826	K562	blood:	n/a	n/a
30	BRCA1	chr11:67806375-67806539	HepG2	liver:	n/a	n/a
31	BRCA1	chr11:67805721-67806001	HepG2	liver:	n/a	n/a
32	BRCA1	chr11:67805766-67805928	Hela-S3	cervix:	n/a	n/a
33	BRCA1	chr11:67807719-67807902	HepG2	liver:	n/a	n/a
34	CBX3	chr11:67806689-67807007	K562	blood:	n/a	n/a
35	CBX3	chr11:67806148-67807089	K562	blood:	n/a	n/a
36	CBX3	chr11:67810892-67811346	K562	blood:	n/a	n/a
37	CBX3	chr11:67805677-67806028	K562	blood:	n/a	n/a
38	CBX3	chr11:67807347-67807896	K562	blood:	n/a	n/a
39	CCNT2	chr11:67807709-67808378	K562	blood:	n/a	chr11:67807975-67807984 chr11:67808102-67808111 chr11:67807880-67807889
40	CCNT2	chr11:67810155-67811308	K562	blood:	n/a	chr11:67810359-67810368
41	CCNT2	chr11:67805793-67806848	K562	blood:	n/a	chr11:67806427-67806436
42	CCNT2	chr11:67807372-67807458	K562	blood:	n/a	n/a
43	CCNT2	chr11:67816327-67816340	K562	blood:	n/a	n/a
44	CEBPB	chr11:67808060-67808179	HepG2	liver:	n/a	n/a
45	CEBPB	chr11:67806235-67806378	Hela-S3	cervix:	n/a	n/a
46	CEBPB	chr11:67806234-67806332	H1-hESC	embryonic stem cell:	n/a	n/a
47	CEBPD	chr11:67805455-67806690	HepG2	liver:	n/a	n/a
48	CEBPD	chr11:67815993-67816248	HepG2	liver:	n/a	n/a
49	CEBPD	chr11:67807156-67807496	HepG2	liver:	n/a	n/a
50	CEBPD	chr11:67820466-67820741	HepG2	liver:	n/a	n/a

(count:2139 , 50 per page) page: 1 2 3 4 5 6 7 ... 43

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr11:67817488-67817538	AG04449	skin:	fetal
2	chr11:67817309-67817359	AG09309	skin:	n/a
3	chr11:67816794-67816844	MCF10A-Er-Src	breast:	n/a
4	chr11:67806363-67806413	NB4	blood:	n/a
5	chr11:67817488-67817538	AG04449	skin:	fetal
6	chr11:67817309-67817359	AG09309	skin:	n/a
7	chr11:67816794-67816844	MCF10A-Er-Src	breast:	n/a
8	chr11:67806363-67806413	NB4	blood:	n/a
9	chr11:67806363-67806413	NT2-D1	testis:	n/a
10	chr11:67810027-67810077	HL-60	blood:	n/a
11	chr11:67815326-67815376	HepG2	liver:	n/a
12	chr11:67815326-67815376	MCF10A-Er-Src	breast:	n/a
13	chr11:67810742-67810792	HRPEpiC	eye:	n/a
14	chr11:67806426-67806476	GM12892	blood:	n/a
15	chr11:67810300-67810350	HAEpiC	amniotic membrane:	n/a
16	chr11:67811641-67811691	RPTEC	kidney:	n/a
17	chr11:67815209-67815259	AG04450	lung:	fetal
18	chr11:67806337-67806387	BJ	skin:	n/a
19	chr11:67815280-67815330	HEK293	kidney:	embryo
20	chr11:67815048-67815098	Caco-2	colon:	n/a
21	chr11:67806437-67806487	K562	blood:	n/a
22	chr11:67815048-67815098	HEEpiC	esophagus:	n/a
23	chr11:67806668-67806718	AG10803	skin:	n/a
24	chr11:67806526-67806576	HCT-116	colon:	n/a
25	chr11:67810300-67810350	AG09309	skin:	n/a
26	chr11:67817488-67817538	HRCEpiC	kidney:	n/a
27	chr11:67806526-67806576	LNCaP	prostate:	n/a
28	chr11:67810905-67810955	NHDF-neo	bronchial:	n/a
29	chr11:67806426-67806476	A549	lung:	n/a
30	chr11:67806337-67806387	HCT-116	colon:	n/a
31	chr11:67810268-67810318	AG04449	skin:	fetal
32	chr11:67815209-67815259	BJ	skin:	n/a
33	chr11:67806432-67806482	HepG2	liver:	n/a
34	chr11:67817309-67817359	T-47D	breast:	n/a
35	chr11:67806526-67806576	ProgFib	skin:	n/a
36	chr11:67806118-67806168	AG04449	skin:	fetal
37	chr11:67817309-67817359	PrEC	prostate:	n/a
38	chr11:67811641-67811691	HL-60	blood:	n/a
39	chr11:67815326-67815376	GM12891	blood:	n/a
40	chr11:67806347-67806397	H1-hESC	embryonic stem cell:	embryo
41	chr11:67815010-67815060	GM19239	blood:	n/a
42	chr11:67811194-67811244	LNCaP	prostate:	n/a
43	chr11:67817309-67817359	NT2-D1	testis:	n/a
44	chr11:67806347-67806397	AG04449	skin:	fetal
45	chr11:67806363-67806413	GM12892	blood:	n/a
46	chr11:67817309-67817359	SK-N-SH	brain:	n/a
47	chr11:67806363-67806413	BE2_C	brain:	n/a
48	chr11:67817309-67817359	HUVEC	blood vessel:	n/a
49	chr11:67811114-67811164	AG10803	skin:	n/a
50	chr11:67810905-67810955	ovcar-3	ovarian:	n/a

(count:60 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr11:67770794..67772778-chr11:67808133..67810042,2	K562	blood:
2	chr11:67823901..67825681-chr11:67836401..67837950,2	MCF-7	breast:
3	chr11:67824134..67827673-chr11:67827794..67832531,5	K562	blood:
4	chr11:67836713..67838709-chr11:67842103..67844994,2	MCF-7	breast:
5	chr11:67773590..67781005-chr11:67806590..67810441,8	K562	blood:
6	chr11:67835131..67837069-chr11:67887610..67890219,2	K562	blood:
7	chr11:67834025..67835744-chr11:67838222..67841118,2	MCF-7	breast:
8	chr11:67840335..67842799-chr11:67979994..67981635,2	MCF-7	breast:
9	chr11:67776070..67778120-chr11:67803675..67805660,2	K562	blood:
10	chr11:67804584..67806148-chr11:67919212..67921767,2	MCF-7	breast:
11	chr11:67832726..67834316-chr11:67980375..67982072,2	MCF-7	breast:
12	chr11:67822188..67824019-chr11:67887306..67890841,3	K562	blood:
13	chr11:67810130..67812734-chr11:67842043..67845551,3	K562	blood:
14	chr11:67811381..67813688-chr11:67817508..67819150,2	MCF-7	breast:
15	chr11:67785486..67786541-chr11:67805426..67806312,6	MCF-7	breast:
16	chr11:67807994..67810183-chr11:67972884..67975191,2	K562	blood:
17	chr11:67805532..67808187-chr11:67887312..67890096,4	MCF-7	breast:
18	chr11:67811381..67813688-chr11:67817508..67819150,2	MCF-7	breast:
19	chr11:67809744..67812462-chr11:67979811..67982598,3	K562	blood:
20	chr11:67840213..67842354-chr11:67855988..67858282,2	K562	blood:
21	chr11:67785578..67786397-chr11:67805432..67806299,2	MCF-7	breast:
22	chr1:115323245..115324929-chr11:67804198..67805795,2	MCF-7	breast:
23	chr11:67785178..67786996-chr11:67824494..67826189,2	MCF-7	breast:
24	chr11:67805173..67809189-chr11:67886289..67889765,4	K562	blood:
25	chr11:67817715..67820693-chr11:67827048..67828955,3	K562	blood:
26	chr11:67825936..67827673-chr11:67828877..67830557,2	K562	blood:
27	chr11:67805173..67807792-chr11:67887405..67889765,3	K562	blood:
28	chr11:67810552..67812245-chr11:67980611..67983549,2	MCF-7	breast:
29	chr11:67837349..67840620-chr11:67841779..67845406,4	K562	blood:
30	chr11:67805712..67808420-chr11:67841905..67844110,2	MCF-7	breast:
31	chr11:67806702..67808543-chr11:67969108..67970985,2	MCF-7	breast:
32	chr11:67820451..67823132-chr11:67825411..67828597,5	K562	blood:
33	chr11:67836713..67838709-chr11:67842103..67844994,2	MCF-7	breast:
34	chr11:67770218..67773172-chr11:67805064..67808057,3	K562	blood:
35	chr11:67809131..67812171-chr11:67888117..67890461,4	MCF-7	breast:
36	chr11:67837582..67841589-chr11:67842987..67847014,5	K562	blood:
37	chr11:67819215..67821345-chr11:67829037..67831541,2	MCF-7	breast:
38	chr11:67808301..67812245-chr11:67979811..67982318,4	K562	blood:
39	chr11:67770583..67773138-chr11:67804309..67805810,2	K562	blood:
40	chr11:67805544..67808516-chr11:67834855..67836795,2	MCF-7	breast:
41	chr11:67823901..67825681-chr11:67836401..67837950,2	MCF-7	breast:
42	chr11:67785486..67786448-chr11:67805426..67806286,4	MCF-7	breast:
43	chr11:67805993..67806840-chr3:73160072..73160591,2	Hela-S3	cervix:
44	chr11:67815248..67818566-chr11:67821589..67824365,3	MCF-7	breast:
45	chr11:67815563..67818643-chr11:67818782..67821542,3	MCF-7	breast:
46	chr11:67805971..67806654-chr8:126442470..126443020,2	Hela-S3	cervix:
47	chr11:67791829..67792701-chr11:67805432..67806435,3	MCF-7	breast:
48	chr11:67803608..67807840-chr11:67979633..67982182,3	K562	blood:
49	chr11:67803641..67806455-chr11:67892940..67895598,3	MCF-7	breast:
50	chr11:67815563..67818643-chr11:67818782..67821542,3	MCF-7	breast:

(count:11 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-TCIRG1-1	chr11:67819560-67819908	ENSG00000255031.1
2	lnc-UNC93B1-5	chr11:67826217-67828536	NONHSAT022504
3	lnc-TCIRG1-1	chr11:67818208-67818288	NONHSAT022497
4	lnc-TCIRG1-1	chr11:67818209-67818288	NONHSAT022498
5	lnc-TCIRG1-1	chr11:67820829-67821229	ENSG00000255031.1
6	lnc-TCIRG1-1	chr11:67819100-67821228	NONHSAT022500
7	lnc-TCIRG1-1	chr11:67817750-67817891	NONHSAT022497
8	lnc-TCIRG1-1	chr11:67817751-67817891	NONHSAT022498
9	lnc-TCIRG1-1	chr11:67820826-67821161	ENSG00000255031.1
10	lnc-TCIRG1-1	chr11:67820290-67820552	ENSG00000255031.1
11	lnc-TCIRG1-1	chr11:67820447-67820552	ENSG00000255031.1

miRNA name	Chromosome Location	mirBase accession
hsa-miR-6753-5p	chr11:67812261-67812282	MIMAT0027406
hsa-miR-6753-3p	chr11:67812399-67812420	MIMAT0027407

No data

Variant related genes	Relation type
ENSG00000255031	TF binding region
CHKA	TF binding region
TCIRG1	TF binding region
ENSG00000255031	CpG island
CHKA	CpG island
TCIRG1	CpG island
ENSG00000173334	chromatin interactions
ENSG00000110721	chromatin interactions
ENSG00000255236	chromatin interactions
ENSG00000223247	chromatin interactions
ENSG00000052723	chromatin interactions
ENSG00000110057	chromatin interactions
ENSG00000110719	chromatin interactions
ENSG00000255031	chromatin interactions
ENSG00000110066	chromatin interactions
ENSG00000006534	chromatin interactions

Extended variants
information (count: 1611 )
Associated
traits (count: 104 )

Variant overlapped rSNPs/rCNVs (count:1611 , 50 per page) page: 1 2 3 4 5 6 7 ... 33

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs4147782	chr11:67805563-67805564	Enhancers Weak transcription Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs538924043	chr11:67805587-67805588	Enhancers Weak transcription Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
3	rs115534484	chr11:67805634-67805635	Enhancers Weak transcription Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
4	rs575620306	chr11:67805657-67805658	Enhancers Weak transcription Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
5	rs4147783	chr11:67805686-67805687	Enhancers Weak transcription Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
6	rs561088835	chr11:67805697-67805698	Enhancers Weak transcription Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
7	rs113522033	chr11:67805706-67805707	Enhancers Weak transcription Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
8	rs375181334	chr11:67805777-67805778	Enhancers Weak transcription Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
9	rs559374773	chr11:67805864-67805865	Enhancers Flanking Active TSS Weak transcription Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
10	rs368113674	chr11:67805868-67805869	Enhancers Flanking Active TSS Weak transcription Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
11	rs540404638	chr11:67805873-67805874	Enhancers Flanking Active TSS Weak transcription Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
12	rs565261014	chr11:67805947-67805948	Enhancers Flanking Active TSS Weak transcription Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
13	rs532445178	chr11:67806004-67806005	Flanking Active TSS Enhancers Active TSS Weak transcription Bivalent Enhancer	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
14	rs200203532	chr11:67806012-67806013	Flanking Active TSS Enhancers Active TSS Weak transcription Bivalent Enhancer	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
15	rs372387529	chr11:67806018-67806019	Flanking Active TSS Enhancers Active TSS Weak transcription Bivalent Enhancer	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
16	rs562798735	chr11:67806088-67806089	Flanking Active TSS Enhancers Active TSS Weak transcription Bivalent Enhancer	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
17	rs376977054	chr11:67806118-67806119	Flanking Active TSS Enhancers Active TSS Weak transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
18	rs884826	chr11:67806129-67806130	Flanking Active TSS Enhancers Active TSS Weak transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	8 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
19	rs370334498	chr11:67806135-67806136	Flanking Active TSS Enhancers Active TSS Weak transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
20	rs559246653	chr11:67806168-67806169	Flanking Active TSS Enhancers Active TSS Weak transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
21	rs534697355	chr11:67806218-67806219	Active TSS Enhancers Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
22	rs574605961	chr11:67806246-67806247	Active TSS Enhancers Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
23	rs191708622	chr11:67806363-67806364	Active TSS Enhancers Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
24	rs146537871	chr11:67806375-67806376	Active TSS Enhancers Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
25	rs182366301	chr11:67806382-67806383	Active TSS Enhancers Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
26	rs111835287	chr11:67806386-67806387	Active TSS Enhancers Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
27	rs538598195	chr11:67806404-67806405	Active TSS Flanking Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
28	rs556999810	chr11:67806418-67806419	Active TSS Flanking Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
29	rs375923970	chr11:67806419-67806420	Active TSS Flanking Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
30	rs569641161	chr11:67806427-67806428	Active TSS Flanking Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
31	rs536563994	chr11:67806463-67806464	Active TSS Flanking Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
32	rs554788440	chr11:67806538-67806539	Active TSS Flanking Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
33	rs369080680	chr11:67806604-67806605	Active TSS Flanking Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
34	rs563286789	chr11:67806622-67806623	Active TSS Flanking Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
35	rs565273715	chr11:67806629-67806630	Active TSS Flanking Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
36	rs577274620	chr11:67806673-67806674	Active TSS Flanking Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
37	rs544151866	chr11:67806684-67806685	Active TSS Flanking Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
38	rs1076558	chr11:67806703-67806704	Active TSS Flanking Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
39	rs112409481	chr11:67806705-67806706	Active TSS Flanking Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
40	rs530316120	chr11:67806808-67806809	Active TSS Weak transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
41	rs542146905	chr11:67806838-67806839	Active TSS Weak transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
42	rs560736984	chr11:67806906-67806907	Active TSS Weak transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
43	rs191241622	chr11:67806943-67806944	Active TSS Weak transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
44	rs149135024	chr11:67807084-67807085	Weak transcription Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
45	rs368611850	chr11:67807097-67807098	Weak transcription Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
46	rs532268549	chr11:67807126-67807127	Weak transcription Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
47	rs199595602	chr11:67807135-67807136	Weak transcription Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
48	rs5792431	chr11:67807143-67807144	Weak transcription Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
49	rs397741512	chr11:67807146-67807147	Weak transcription Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
50	rs568904031	chr11:67807170-67807171	Weak transcription Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:104)

Disease	PMID	Source
Medulloblastoma	21979893	CNVD
Gastric cancer	17908304	CNVD
Multiple myeloma	20724749	CNVD
Wilms tumour	21544195	CNVD
Autism	22495311	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Non-small cell lung cancer	21385341	CNVD
Intellectual disability	22102821	CNVD
Glioblastoma multiforme	21138945	CNVD
Acute myeloid leukemia	20729466	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	21637783	CNVD
Acute myeloid leukemia	16864856	CNVD
Chronic lymphocytic leukemia	21795749	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Neuroblastoma	21484798	CNVD
Ewing''s sarcoma	21437220	CNVD
Oral cancer	21386901	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	20837533	CNVD
Breast cancer	21264507	CNVD
Cervical cancer	21063398	CNVD
Glioblastoma multiforme	19960244	CNVD
Liposarcoma	21253554	CNVD
Neuroblastoma	18923524	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Neuroblastoma	17533364	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Lung cancer	18438408	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Prostate cancer	18632612	CNVD
Glioblastoma multiforme	21080181	CNVD
Smith-Lemli-Opitz syndrome	21572526	CNVD
Multiple myeloma	16461302	CNVD
Cancer	16751803	CNVD
Seminomas	18059402	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Metanephric adenoma	20802469	CNVD
Chordoma	21602918	CNVD
Melanoma	18172304	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	21045282	CNVD
Breast cancer	21806811	CNVD
Breast cancer	22002566	CNVD
Ductal carcinoma	18381933	CNVD
Retinoblastoma	22278416	CNVD
Breast cancer	20953835	CNVD
oto-dental syndrome	17656375	CNVD
Asthma	21956041	CNVD
Breast cancer	17603634	CNVD
Ovarian neoplasms	16753589	CNVD
Non-small cell lung cancer	20864512	CNVD
Hepatocellular carcinoma	16750200	CNVD
Cervical cancer	21062161	CNVD
Breast cancer	21509527	CNVD
Breast cancer	17001317	CNVD
Oral squamous cell carcinoma	16619035	CNVD
Intracranial aneurysm	16715129	CNVD
Colorectal cancer	16272173	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Esophageal adenocarcinoma	18820669	CNVD
Colorectal cancer	16882699	CNVD
Berardinelli-seip congenital generalized lipodystrophy	17668395	CNVD
Spinal muscular atrophy	17668395	CNVD
Neonatal seizures	17668395	CNVD
Neonatal seizures	17668391	CNVD
Neuroticism	17667963	CNVD
Cancer	17916600	CNVD
Squamous cell cancer	19047905	CNVD
Multiple endocrine neoplasia type 1	19566914	CNVD
XY sex reversal	17503084	CNVD
Berardinelli-seip congenital generalized lipodystrophy	17668391	CNVD
Maculopathy	17646752	CNVD
Breast cancer	17899364	CNVD
Breast cancer	17157792	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Hodgkin''s lymphoma	17606441	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Cancer	20164919	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Breast cancer	21364760	CNVD
Acute myeloid leukemia	21251322	CNVD
lymphocytic leukemia	21291569	CNVD
Colorectal cancer	22860045	CNVD
Hirschsprung''s Disease	21712996	CNVD
Schizophrenia	21399695	CNVD
Ovarian clear cell carcinoma	19293255	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
small cell lung cancer	20016488	CNVD
Developmental delay	21373257	CNVD
speech delay	21373257	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:1524 , 50 per page) page: 1 2 3 4 5 6 7 ... 31

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:67799000-67806000	Weak transcription	Fetal Kidney	kidney
2	chr11:67799200-67805800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr11:67799200-67806200	Weak transcription	Pancreatic Islets	Pancreatic Islet
4	chr11:67799800-67806000	Weak transcription	Fetal Brain Male	brain
5	chr11:67799800-67806400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
6	chr11:67801600-67806000	Weak transcription	Aorta	Aorta
7	chr11:67802000-67805600	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
8	chr11:67802000-67805600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
9	chr11:67802000-67805600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
10	chr11:67802000-67805600	Weak transcription	Brain Angular Gyrus	brain
11	chr11:67802000-67805600	Weak transcription	HSMM	muscle
12	chr11:67802000-67805600	Weak transcription	NHDF-Ad	bronchial
13	chr11:67802000-67805800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
14	chr11:67802000-67806000	Weak transcription	H9 Cell Line	embryonic stem cell
15	chr11:67802000-67807400	Weak transcription	Dnd41	blood
16	chr11:67802200-67805600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
17	chr11:67802200-67805600	Weak transcription	HUES48 Cell Line	embryonic stem cell
18	chr11:67802200-67805800	Weak transcription	Primary T cells from cord blood	blood
19	chr11:67802200-67805800	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
20	chr11:67802200-67805800	Weak transcription	HMEC	breast
21	chr11:67802600-67805800	Enhancers	Primary monocytes fromperipheralblood	blood
22	chr11:67803000-67805800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
23	chr11:67803000-67806000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
24	chr11:67803200-67805800	Weak transcription	HUES64 Cell Line	embryonic stem cell
25	chr11:67803200-67805800	Weak transcription	Fetal Brain Female	brain
26	chr11:67803200-67806000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
27	chr11:67803400-67805600	Weak transcription	Fetal Lung	lung
28	chr11:67803400-67806000	Enhancers	Primary T cells fromperipheralblood	blood
29	chr11:67803400-67806200	Enhancers	Primary hematopoietic stem cells	blood
30	chr11:67803600-67805600	Enhancers	Adipose Nuclei	Adipose
31	chr11:67803600-67805800	Enhancers	Right Ventricle	heart
32	chr11:67803600-67805800	Enhancers	Skeletal Muscle Female	skeletal muscle
33	chr11:67803600-67806000	Enhancers	Primary T helper cells fromperipheralblood	blood
34	chr11:67803600-67806000	Enhancers	Primary mononuclear cells fromperipheralblood	Blood
35	chr11:67803600-67806000	Enhancers	Left Ventricle	heart
36	chr11:67803600-67806200	Enhancers	Primary B cells from cord blood	blood
37	chr11:67803600-67806200	Enhancers	Primary T killer naive cells fromperipheralblood	blood
38	chr11:67803600-67806400	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
39	chr11:67803600-67806400	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
40	chr11:67803800-67805800	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
41	chr11:67803800-67805800	Enhancers	Colonic Mucosa	Colon
42	chr11:67803800-67805800	Enhancers	Lung	lung
43	chr11:67803800-67806000	Enhancers	Primary B cells from peripheral blood	blood
44	chr11:67803800-67806000	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
45	chr11:67803800-67806000	Enhancers	Spleen	Spleen
46	chr11:67803800-67806200	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
47	chr11:67804000-67806000	Enhancers	Primary T helper naive cells from peripheral blood	blood
48	chr11:67804000-67806000	Enhancers	Primary T regulatory cells fromperipheralblood	blood
49	chr11:67804000-67806000	Enhancers	Fetal Thymus	thymus
50	chr11:67804000-67806000	Enhancers	Right Atrium	heart

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