Variant report

Variant	nsv898058
Chromosome Location	chr11:86754948-86889284
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:879)
CpG islands
(count:62)
Chromatin interactive
region (count:33)
LncRNA
region (count:1)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:879 , 50 per page) page: 1 2 3 4 5 6 7 ... 18

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr11:86808596-86809092	K562	blood:	n/a	n/a
2	ARID3A	chr11:86775153-86775267	HepG2	liver:	n/a	n/a
3	ARID3A	chr11:86884421-86884672	HepG2	liver:	n/a	n/a
4	ARID3A	chr11:86808565-86809024	HepG2	liver:	n/a	n/a
5	ARID3A	chr11:86787689-86788620	HepG2	liver:	n/a	n/a
6	ARID3A	chr11:86861511-86861769	HepG2	liver:	n/a	n/a
7	ARID3A	chr11:86839305-86839814	HepG2	liver:	n/a	n/a
8	ATF1	chr11:86808580-86808925	K562	blood:	n/a	n/a
9	ATF3	chr11:86803222-86803489	K562	blood:	n/a	n/a
10	BACH1	chr11:86805450-86805451	K562	blood:	n/a	n/a
11	BACH1	chr11:86859343-86859398	H1-hESC	embryonic stem cell:	n/a	n/a
12	BACH1	chr11:86835199-86835457	H1-hESC	embryonic stem cell:	n/a	n/a
13	BACH1	chr11:86757561-86757669	K562	blood:	n/a	n/a
14	BACH1	chr11:86808725-86808892	K562	blood:	n/a	n/a
15	BCL11A	chr11:86794104-86794296	H1-hESC	embryonic stem cell:	n/a	n/a
16	BCL11A	chr11:86794117-86794402	H1-hESC	embryonic stem cell:	n/a	n/a
17	BCL3	chr11:86884209-86884921	A549	lung:	n/a	n/a
18	BHLHE40	chr11:86808720-86808888	K562	blood:	n/a	n/a
19	BRCA1	chr11:86884212-86885082	Hela-S3	cervix:	n/a	n/a
20	BRCA1	chr11:86794111-86794566	H1-hESC	embryonic stem cell:	n/a	n/a
21	CBX3	chr11:86808476-86808990	K562	blood:	n/a	n/a
22	CBX3	chr11:86884234-86885151	HCT-116	colon:	n/a	n/a
23	CBX3	chr11:86797796-86798165	K562	blood:	n/a	n/a
24	CBX3	chr11:86884217-86885173	HCT-116	colon:	n/a	n/a
25	CCNT2	chr11:86808679-86808904	K562	blood:	n/a	n/a
26	CCNT2	chr11:86885754-86886111	K562	blood:	n/a	n/a
27	CEBPB	chr11:86823041-86823150	HepG2	liver:	n/a	n/a
28	CEBPB	chr11:86848820-86848896	HepG2	liver:	n/a	n/a
29	CEBPB	chr11:86803289-86803589	Hela-S3	cervix:	n/a	n/a
30	CEBPB	chr11:86832701-86832770	A549	lung:	n/a	n/a
31	CEBPB	chr11:86884305-86885113	HCT-116	colon:	n/a	n/a
32	CEBPB	chr11:86832702-86832814	K562	blood:	n/a	n/a
33	CEBPB	chr11:86884371-86885152	HCT-116	colon:	n/a	n/a
34	CEBPB	chr11:86831217-86831245	HepG2	liver:	n/a	n/a
35	CEBPB	chr11:86814348-86814868	K562	blood:	n/a	n/a
36	CEBPB	chr11:86787785-86788447	HepG2	liver:	n/a	chr11:86788171-86788182
37	CEBPB	chr11:86787984-86788286	HepG2	liver:	n/a	chr11:86788171-86788182
38	CEBPB	chr11:86861546-86861748	HepG2	liver:	n/a	n/a
39	CEBPB	chr11:86855298-86855577	Hela-S3	cervix:	n/a	n/a
40	CEBPB	chr11:86788105-86788362	K562	blood:	n/a	chr11:86788171-86788182
41	CEBPB	chr11:86787970-86788282	HepG2	liver:	n/a	chr11:86788171-86788182
42	CEBPB	chr11:86788183-86788372	A549	lung:	n/a	n/a
43	CEBPB	chr11:86836311-86836703	Hela-S3	cervix:	n/a	n/a
44	CEBPB	chr11:86803287-86803608	K562	blood:	n/a	n/a
45	CEBPB	chr11:86811816-86811879	K562	blood:	n/a	n/a
46	CEBPB	chr11:86765380-86765521	K562	blood:	n/a	n/a
47	CEBPB	chr11:86814685-86814880	H1-hESC	embryonic stem cell:	n/a	n/a
48	CEBPB	chr11:86836241-86836797	A549	lung:	n/a	n/a
49	CEBPB	chr11:86836336-86836649	A549	lung:	n/a	n/a
50	CEBPB	chr11:86884318-86885021	Hela-S3	cervix:	n/a	n/a

(count:62 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr11:86793667-86793717	PFSK-1	brain:	n/a
2	chr11:86793667-86793717	PFSK-1	brain:	n/a
3	chr11:86793667-86793717	ProgFib	skin:	n/a
4	chr11:86793667-86793717	AG04450	lung:	fetal
5	chr11:86793667-86793717	HCM	heart:	n/a
6	chr11:86793667-86793717	HCT-116	colon:	n/a
7	chr11:86793667-86793717	GM12891	blood:	n/a
8	chr11:86793667-86793717	H1-hESC	embryonic stem cell:	embryo
9	chr11:86793667-86793717	AG04449	skin:	fetal
10	chr11:86793667-86793717	GM19239	blood:	n/a
11	chr11:86793667-86793717	SKMC	muscle:	n/a
12	chr11:86793667-86793717	Jurkat	blood:	n/a
13	chr11:86793667-86793717	SK-N-SH_RA	brain:	n/a
14	chr11:86793667-86793717	HNPCEpiC	eye:	n/a
15	chr11:86793667-86793717	NHBE	bronchial:	n/a
16	chr11:86793667-86793717	HEK293	kidney:	embryo
17	chr11:86793667-86793717	PrEC	prostate:	n/a
18	chr11:86793667-86793717	HL-60	blood:	n/a
19	chr11:86793667-86793717	K562	blood:	n/a
20	chr11:86793667-86793717	T-47D	breast:	n/a
21	chr11:86793667-86793717	PANC-1	pancreas:	n/a
22	chr11:86793667-86793717	AoSMC	blood vessel:	n/a
23	chr11:86793667-86793717	BE2_C	brain:	n/a
24	chr11:86793667-86793717	HMEC	breast:	n/a
25	chr11:86793667-86793717	Hepatocyte	liver:	n/a
26	chr11:86793667-86793717	SK-N-SH	brain:	n/a
27	chr11:86793667-86793717	NHDF-neo	bronchial:	n/a
28	chr11:86793667-86793717	Caco-2	colon:	n/a
29	chr11:86793667-86793717	AG09319	gingival:	n/a
30	chr11:86793667-86793717	HRE	kidney:	n/a
31	chr11:86793667-86793717	MCF10A-Er-Src	breast:	n/a
32	chr11:86793667-86793717	BJ	skin:	n/a
33	chr11:86793667-86793717	AG10803	skin:	n/a
34	chr11:86793667-86793717	HepG2	liver:	n/a
35	chr11:86793667-86793717	GM12878	blood:	n/a
36	chr11:86793667-86793717	GM06990	blood:	n/a
37	chr11:86793667-86793717	HCPEpiC	choroid plexus:	n/a
38	chr11:86793667-86793717	RPTEC	kidney:	n/a
39	chr11:86793667-86793717	CMK	blood:	n/a
40	chr11:86793667-86793717	HUVEC	blood vessel:	n/a
41	chr11:86793667-86793717	HRCEpiC	kidney:	n/a
42	chr11:86793667-86793717	GM12892	blood:	n/a
43	chr11:86793667-86793717	HIPEpiC	eye:	n/a
44	chr11:86793667-86793717	HEEpiC	esophagus:	n/a
45	chr11:86793667-86793717	SK-N-MC	brain:	n/a
46	chr11:86793667-86793717	ovcar-3	ovarian:	n/a
47	chr11:86793667-86793717	Hela-S3	cervix:	n/a
48	chr11:86793667-86793717	HRPEpiC	eye:	n/a
49	chr11:86793667-86793717	A549	lung:	n/a
50	chr11:86793667-86793717	NT2-D1	testis:	n/a

(count:33 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr11:86798772..86800664-chr11:86801632..86803429,2	K562	blood:
2	chr11:86805484..86807360-chr11:87007311..87009404,2	MCF-7	breast:
3	chr11:86791713..86794335-chr11:86807155..86810110,2	K562	blood:
4	chr11:86809033..86811037-chr11:86814602..86817030,2	K562	blood:
5	chr11:86779436..86781916-chr11:86820681..86823632,2	K562	blood:
6	chr11:86818728..86820494-chr11:86831907..86834474,2	K562	blood:
7	chr11:86809033..86811037-chr11:86814602..86817030,2	K562	blood:
8	chr11:86664821..86667112-chr11:86824827..86827318,2	MCF-7	breast:
9	chr11:86774381..86776873-chr11:86783192..86784791,2	MCF-7	breast:
10	chr11:86773350..86775874-chr11:86786933..86789262,2	K562	blood:
11	chr11:86847845..86849686-chr11:86851887..86854201,2	MCF-7	breast:
12	chr11:86840088..86842543-chr11:86845796..86847320,2	K562	blood:
13	chr11:86803340..86806124-chr11:86810035..86812567,2	K562	blood:
14	chr11:86779436..86781916-chr11:86820681..86823632,2	K562	blood:
15	chr11:86774381..86776873-chr11:86783192..86784791,2	MCF-7	breast:
16	chr11:86666646..86669098-chr11:86793601..86796453,2	MCF-7	breast:
17	chr11:86847845..86849686-chr11:86851887..86854201,2	MCF-7	breast:
18	chr11:86806619..86807569-chr11:86992272..86993052,3	MCF-7	breast:
19	chr11:86840088..86842543-chr11:86845796..86847320,2	K562	blood:
20	chr11:86810025..86812420-chr11:86813811..86815830,2	K562	blood:
21	chr11:86775970..86778427-chr11:86780728..86783153,2	MCF-7	breast:
22	chr11:86666377..86668127-chr11:86777845..86780660,2	K562	blood:
23	chr11:86867900..86869412-chr11:86871775..86874240,2	K562	blood:
24	chr11:86818728..86820494-chr11:86831907..86834474,2	K562	blood:
25	chr11:86798772..86800664-chr11:86801632..86803429,2	K562	blood:
26	chr11:86664322..86666678-chr11:86802389..86805418,3	MCF-7	breast:
27	chr11:86749278..86752197-chr11:86764776..86767404,2	K562	blood:
28	chr11:86773350..86775874-chr11:86786933..86789262,2	K562	blood:
29	chr11:86706337..86706967-chr11:86808249..86808967,2	K562	blood:
30	chr11:86803340..86806124-chr11:86810035..86812567,2	K562	blood:
31	chr11:86717836..86719701-chr11:86763219..86765782,2	K562	blood:
32	chr11:86810025..86812420-chr11:86813811..86815830,2	K562	blood:
33	chr11:86867900..86869412-chr11:86871775..86874240,2	K562	blood:

(count:1 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-FZD4-6	chr11:86805776-86807627	NONHSAT023514

No data

Variant related genes	Relation type
TMEM135	TF binding region
ENSG00000254843	TF binding region
TMEM135	CpG island
ENSG00000254843	CpG island
ENSG00000254843	chromatin interactions
ENSG00000246523	chromatin interactions
ENSG00000166575	chromatin interactions
ENSG00000174804	chromatin interactions

Extended variants
information (count: 5505 )
Associated
traits (count: 76 )

Variant overlapped rSNPs/rCNVs (count:5505 , 50 per page) page: 1 2 3 4 5 6 7 ... 111

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs55672968	chr11:86754948-86754949	Weak transcription ZNF genes & repeats Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs538395056	chr11:86754958-86754959	Weak transcription ZNF genes & repeats Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs181769192	chr11:86755064-86755065	Weak transcription ZNF genes & repeats Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs186473198	chr11:86755100-86755101	Weak transcription ZNF genes & repeats Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs539175583	chr11:86755157-86755158	Weak transcription ZNF genes & repeats Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs553138802	chr11:86755164-86755165	Weak transcription ZNF genes & repeats Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs572854482	chr11:86755165-86755166	Weak transcription ZNF genes & repeats Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs535491150	chr11:86755242-86755243	Weak transcription ZNF genes & repeats Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs555693391	chr11:86755276-86755277	Weak transcription ZNF genes & repeats Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs533910892	chr11:86755294-86755295	Weak transcription ZNF genes & repeats Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs2512371	chr11:86755322-86755323	Weak transcription ZNF genes & repeats Strong transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
12	rs544351730	chr11:86755450-86755451	Weak transcription ZNF genes & repeats Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs10898586	chr11:86755466-86755467	Weak transcription ZNF genes & repeats Strong transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
14	rs577799983	chr11:86755538-86755539	Weak transcription ZNF genes & repeats Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs2513228	chr11:86755539-86755540	Weak transcription ZNF genes & repeats Strong transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
16	rs374144402	chr11:86755542-86755543	Weak transcription ZNF genes & repeats Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs2512478	chr11:86755553-86755554	Weak transcription ZNF genes & repeats Strong transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
18	rs529238211	chr11:86755568-86755569	Weak transcription ZNF genes & repeats Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs548974674	chr11:86755592-86755593	Weak transcription ZNF genes & repeats Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs191501512	chr11:86755626-86755627	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs61906193	chr11:86755645-86755646	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
22	rs61906194	chr11:86755681-86755682	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
23	rs140034097	chr11:86755721-86755722	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs572029880	chr11:86755732-86755733	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs527916567	chr11:86755794-86755795	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs542214658	chr11:86755824-86755825	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs546715966	chr11:86755838-86755839	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs370246663	chr11:86755848-86755849	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs566613063	chr11:86755914-86755915	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs535402692	chr11:86755944-86755945	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs555406560	chr11:86755946-86755947	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs569107525	chr11:86755959-86755960	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs370156489	chr11:86755968-86755969	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs113975287	chr11:86755984-86755985	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs558057588	chr11:86755991-86755992	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs577756358	chr11:86756004-86756005	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs111809154	chr11:86756057-86756058	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs570817044	chr11:86756088-86756089	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs148455346	chr11:86756095-86756096	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs542582321	chr11:86756134-86756135	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs181138583	chr11:86756159-86756160	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs538340161	chr11:86756164-86756165	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs202134791	chr11:86756172-86756173	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs185104945	chr11:86756196-86756197	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs3133315	chr11:86756205-86756206	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
46	rs112104330	chr11:86756211-86756212	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs552071574	chr11:86756216-86756217	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs567004750	chr11:86756220-86756221	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs529022552	chr11:86756228-86756229	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs548932411	chr11:86756248-86756249	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:76)

Disease	PMID	Source
Medulloblastoma	21979893	CNVD
Gastric cancer	17908304	CNVD
Multiple myeloma	20724749	CNVD
Wilms tumour	21544195	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Non-small cell lung cancer	21385341	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Acute myeloid leukemia	20729466	CNVD
Cancer	21637783	CNVD
Acute myeloid leukemia	16864856	CNVD
Chronic lymphocytic leukemia	21795749	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Neuroblastoma	21484798	CNVD
Ewing''s sarcoma	21437220	CNVD
Oral cancer	21386901	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	20837533	CNVD
Breast cancer	21264507	CNVD
Cervical cancer	21063398	CNVD
Glioblastoma multiforme	19960244	CNVD
Liposarcoma	21253554	CNVD
Neuroblastoma	18923524	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Neuroblastoma	17533364	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Multiple myeloma	16461302	CNVD
Glioblastoma multiforme	21080181	CNVD
Cancer	16751803	CNVD
Seminomas	18059402	CNVD
Cervical cancer	21062161	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	17157792	CNVD
Esophageal squamous carcinoma	18350619	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Neuroblastoma	18923191	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	22429812	CNVD
Breast cancer	21364760	CNVD
Ovarian neoplasms	16753589	CNVD
Breast cancer	16608533	CNVD
Myelofibrosis	22110671	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
T-cell lymphomas	19863542	CNVD
Melanoma	18172304	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Sudden cardiac death	19188705	CNVD
Prostate cancer	16573809	CNVD
Basal cell lymphoma	17053054	CNVD
Hepatocellular carcinoma	16785998	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Acute myeloid leukemia	21251322	CNVD
Breast cancer	21858162	CNVD
Breast cancer	21785460	CNVD
Cancer	22183965	CNVD
Melanoma	22183965	CNVD
Developmental delay	21147756	CNVD
Acute lymphoblastic leukemia	18458336	CNVD
Ductal carcinoma	22052326	CNVD
small cell lung cancer	20016488	CNVD
T-cell acute lymphoblastic leukemia	19406988	CNVD
Attention deficit hyperactivity disorder	22241247	CNVD
Breast cancer	21958427	CNVD
Breast cancer	17133270	CNVD
Lung cancer	18438408	CNVD
Ewing''s sarcoma	17952124	CNVD
Obesity	20622171	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD

Chromatin state (count:1630 , 50 per page) page: 1 2 3 4 5 6 7 ... 33

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:86749600-86758200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr11:86749600-86766800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr11:86750000-86756400	Weak transcription	Primary B cells from cord blood	blood
4	chr11:86750000-86765800	Weak transcription	Placenta	Placenta
5	chr11:86750400-86760600	Weak transcription	Monocytes-CD14+_RO01746	blood
6	chr11:86750600-86755400	Weak transcription	Primary monocytes fromperipheralblood	blood
7	chr11:86750600-86755600	Weak transcription	Fetal Intestine Small	intestine
8	chr11:86750600-86755600	Weak transcription	Right Ventricle	heart
9	chr11:86750600-86756400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
10	chr11:86750600-86757600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
11	chr11:86750600-86757800	Weak transcription	H9 Cell Line	embryonic stem cell
12	chr11:86750600-86757800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
13	chr11:86750600-86757800	Weak transcription	Fetal Intestine Large	intestine
14	chr11:86750600-86759800	Weak transcription	Fetal Thymus	thymus
15	chr11:86750600-86760600	Weak transcription	Rectal Mucosa Donor 29	rectum
16	chr11:86750800-86755000	Weak transcription	NHEK	skin
17	chr11:86750800-86757200	Weak transcription	Fetal Muscle Leg	muscle
18	chr11:86750800-86757800	Weak transcription	HUES48 Cell Line	embryonic stem cell
19	chr11:86750800-86758600	Weak transcription	HSMM	muscle
20	chr11:86750800-86759800	Weak transcription	HSMMtube	muscle
21	chr11:86750800-86760000	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
22	chr11:86750800-86760200	Weak transcription	Sigmoid Colon	Sigmoid Colon
23	chr11:86750800-86780600	Weak transcription	Primary T helper cells fromperipheralblood	blood
24	chr11:86750800-86782000	Weak transcription	Skeletal Muscle Female	skeletal muscle
25	chr11:86750800-86787400	Weak transcription	A549	lung
26	chr11:86751000-86755000	Weak transcription	Cortex derived primary cultured neurospheres	brain
27	chr11:86751000-86755400	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
28	chr11:86751000-86757000	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
29	chr11:86751000-86757400	Weak transcription	Stomach Smooth Muscle	stomach
30	chr11:86751000-86760000	Weak transcription	Duodenum Smooth Muscle	Duodenum
31	chr11:86751000-86786800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
32	chr11:86751000-86787400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
33	chr11:86751200-86755000	Weak transcription	Rectal Mucosa Donor 31	rectum
34	chr11:86751200-86756200	Weak transcription	Duodenum Mucosa	Duodenum
35	chr11:86751200-86756600	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
36	chr11:86751200-86757200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
37	chr11:86751200-86762600	Weak transcription	Primary T helper cells PMA-I stimulated	--
38	chr11:86751200-86785600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
39	chr11:86751400-86756600	Weak transcription	Hela-S3	cervix
40	chr11:86751400-86757400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
41	chr11:86751400-86758400	Weak transcription	Primary T killer memory cells from peripheral blood	blood
42	chr11:86751400-86759800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
43	chr11:86751400-86767800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
44	chr11:86751400-86786400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
45	chr11:86751600-86757000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
46	chr11:86751600-86757400	Weak transcription	Fetal Lung	lung
47	chr11:86751600-86757800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
48	chr11:86751600-86787000	Weak transcription	Aorta	Aorta
49	chr11:86751800-86755000	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
50	chr11:86752000-86768800	Weak transcription	Ovary	ovary

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links