Variant report

Variant	rs181769192
Chromosome Location	chr11:86755064-86755065
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1044081	chr11:86133641-86868560	Bivalent/Poised TSS Weak transcription Active TSS Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	40 gene(s)	inside rSNPs	diseases
2	nsv541118	chr11:86133641-86868560	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	40 gene(s)	inside rSNPs	diseases
3	nsv1037042	chr11:86586876-86978492	Enhancers Flanking Active TSS Strong transcription Active TSS Weak transcription ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
4	nsv541119	chr11:86586876-86978492	Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
5	esv13345	chr11:86753735-86756555	Weak transcription Strong transcription ZNF genes & repeats Enhancers Transcr. at gene 5' and 3' Genic enhancers	n/a	n/a	inside rSNPs	n/a
6	nsv898058	chr11:86754948-86889284	Weak transcription Strong transcription Flanking Active TSS Enhancers Genic enhancers Bivalent Enhancer ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
7	nsv898059	chr11:86754948-86949369	Weak transcription Strong transcription Enhancers ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:84 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:86749600-86758200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr11:86749600-86766800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr11:86750000-86756400	Weak transcription	Primary B cells from cord blood	blood
4	chr11:86750000-86765800	Weak transcription	Placenta	Placenta
5	chr11:86750400-86760600	Weak transcription	Monocytes-CD14+_RO01746	blood
6	chr11:86750600-86755400	Weak transcription	Primary monocytes fromperipheralblood	blood
7	chr11:86750600-86755600	Weak transcription	Fetal Intestine Small	intestine
8	chr11:86750600-86755600	Weak transcription	Right Ventricle	heart
9	chr11:86750600-86756400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
10	chr11:86750600-86757600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
11	chr11:86750600-86757800	Weak transcription	H9 Cell Line	embryonic stem cell
12	chr11:86750600-86757800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
13	chr11:86750600-86757800	Weak transcription	Fetal Intestine Large	intestine
14	chr11:86750600-86759800	Weak transcription	Fetal Thymus	thymus
15	chr11:86750600-86760600	Weak transcription	Rectal Mucosa Donor 29	rectum
16	chr11:86750800-86757200	Weak transcription	Fetal Muscle Leg	muscle
17	chr11:86750800-86757800	Weak transcription	HUES48 Cell Line	embryonic stem cell
18	chr11:86750800-86758600	Weak transcription	HSMM	muscle
19	chr11:86750800-86759800	Weak transcription	HSMMtube	muscle
20	chr11:86750800-86760000	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
21	chr11:86750800-86760200	Weak transcription	Sigmoid Colon	Sigmoid Colon
22	chr11:86750800-86780600	Weak transcription	Primary T helper cells fromperipheralblood	blood
23	chr11:86750800-86782000	Weak transcription	Skeletal Muscle Female	skeletal muscle
24	chr11:86750800-86787400	Weak transcription	A549	lung
25	chr11:86751000-86755400	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
26	chr11:86751000-86757000	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
27	chr11:86751000-86757400	Weak transcription	Stomach Smooth Muscle	stomach
28	chr11:86751000-86760000	Weak transcription	Duodenum Smooth Muscle	Duodenum
29	chr11:86751000-86786800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
30	chr11:86751000-86787400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
31	chr11:86751200-86756200	Weak transcription	Duodenum Mucosa	Duodenum
32	chr11:86751200-86756600	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
33	chr11:86751200-86757200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
34	chr11:86751200-86762600	Weak transcription	Primary T helper cells PMA-I stimulated	--
35	chr11:86751200-86785600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
36	chr11:86751400-86756600	Weak transcription	Hela-S3	cervix
37	chr11:86751400-86757400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
38	chr11:86751400-86758400	Weak transcription	Primary T killer memory cells from peripheral blood	blood
39	chr11:86751400-86759800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
40	chr11:86751400-86767800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
41	chr11:86751400-86786400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
42	chr11:86751600-86757000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
43	chr11:86751600-86757400	Weak transcription	Fetal Lung	lung
44	chr11:86751600-86757800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
45	chr11:86751600-86787000	Weak transcription	Aorta	Aorta
46	chr11:86752000-86768800	Weak transcription	Ovary	ovary
47	chr11:86752000-86768800	Weak transcription	Psoas Muscle	Psoas
48	chr11:86752200-86756400	Weak transcription	Rectal Smooth Muscle	rectum
49	chr11:86752200-86757600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
50	chr11:86752200-86759800	Weak transcription	Fetal Brain Male	brain

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