Variant report

Variant	nsv898643
Chromosome Location	chr12:7760124-7794736
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:501)
CpG islands
(count:549)
Chromatin interactive
region (count:14)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:501 , 50 per page) page: 1 2 3 4 5 6 7 ... 11

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr12:7770878-7771157	HepG2	liver:	n/a	n/a
2	ARID3A	chr12:7791339-7791539	HepG2	liver:	n/a	n/a
3	ATF1	chr12:7762660-7762875	K562	blood:	n/a	n/a
4	ATF2	chr12:7791127-7791684	H1-hESC	embryonic stem cell:	n/a	n/a
5	BHLHE40	chr12:7791327-7791525	K562	blood:	n/a	n/a
6	BRCA1	chr12:7775219-7775259	Hela-S3	cervix:	n/a	n/a
7	CEBPB	chr12:7791155-7791608	H1-hESC	embryonic stem cell:	n/a	n/a
8	CEBPB	chr12:7791779-7791785	HepG2	liver:	n/a	n/a
9	CEBPB	chr12:7791778-7791891	A549	lung:	n/a	n/a
10	CEBPB	chr12:7788642-7788813	HepG2	liver:	n/a	chr12:7788683-7788694
11	CEBPB	chr12:7788665-7788756	K562	blood:	n/a	chr12:7788683-7788694
12	CHD2	chr12:7780952-7781152	H1-hESC	embryonic stem cell:	n/a	n/a
13	CTCF	chr12:7791261-7791587	SK-N-SH_RA	brain:	n/a	n/a
14	CTCF	chr12:7771000-7771150	GM12874	blood:	n/a	n/a
15	CTCF	chr12:7791340-7791490	GM12868	blood:	n/a	n/a
16	CTCF	chr12:7791760-7791823	GM12891	blood:	n/a	n/a
17	CTCF	chr12:7791353-7791526	MCF-7	breast:	n/a	n/a
18	CTCF	chr12:7791380-7791530	NHEK	skin:	n/a	n/a
19	CTCF	chr12:7791740-7791890	AG09319	gingival:	n/a	n/a
20	CTCF	chr12:7770960-7771110	HMF	breast:	n/a	n/a
21	CTCF	chr12:7770969-7771129	K562	blood:	n/a	n/a
22	CTCF	chr12:7770940-7771090	AG10803	skin:	n/a	n/a
23	CTCF	chr12:7791360-7791510	MCF-7	breast:	n/a	n/a
24	CTCF	chr12:7791340-7791490	WI-38	lung:	n/a	n/a
25	CTCF	chr12:7770940-7771090	GM12874	blood:	n/a	n/a
26	CTCF	chr12:7791360-7791510	GM12870	blood:	n/a	n/a
27	CTCF	chr12:7791440-7791590	RPTEC	kidney:	n/a	n/a
28	CTCF	chr12:7791344-7791582	ProgFib	skin:	n/a	n/a
29	CTCF	chr12:7791094-7791638	HCT-116	colon:	n/a	n/a
30	CTCF	chr12:7791220-7791648	K562	blood:	n/a	n/a
31	CTCF	chr12:7791380-7791530	HUVEC	blood vessel:	n/a	n/a
32	CTCF	chr12:7791400-7791550	WERI-Rb-1	eye:	n/a	n/a
33	CTCF	chr12:7791400-7791550	HPF	lung:	n/a	n/a
34	CTCF	chr12:7791773-7791795	GM19239	blood:	n/a	n/a
35	CTCF	chr12:7770960-7771110	HPAF	blood vessel:	n/a	n/a
36	CTCF	chr12:7770945-7771115	LNCaP	prostate:	n/a	n/a
37	CTCF	chr12:7791400-7791550	HepG2	liver:	n/a	n/a
38	CTCF	chr12:7791300-7791450	HMEC	breast:	n/a	n/a
39	CTCF	chr12:7791920-7792070	BJ	skin:	n/a	n/a
40	CTCF	chr12:7791380-7791530	HepG2	liver:	n/a	n/a
41	CTCF	chr12:7791323-7791599	Pancreas_OC	pancreas:	n/a	n/a
42	CTCF	chr12:7791214-7791626	K562	blood:	n/a	n/a
43	CTCF	chr12:7791744-7791809	GM20000	blood:	n/a	n/a
44	CTCF	chr12:7781363-7781467	H1-hESC	embryonic stem cell:	n/a	n/a
45	CTCF	chr12:7771000-7771150	GM06990	blood:	n/a	n/a
46	CTCF	chr12:7770920-7771070	NHEK	skin:	n/a	n/a
47	CTCF	chr12:7791360-7791510	NHLF	lung:	n/a	n/a
48	CTCF	chr12:7791341-7791570	MCF-7	breast:	n/a	n/a
49	CTCF	chr12:7770893-7771112	HepG2	liver:	n/a	n/a
50	CTCF	chr12:7791340-7791490	GM12869	blood:	n/a	n/a

(count:549 , 50 per page) page: 1 2 3 4 5 6 7 ... 11

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr12:7781169-7781219	HAEpiC	amniotic membrane:	n/a
2	chr12:7781288-7781338	IMR90	lung:	fetal
3	chr12:7781431-7781481	HRPEpiC	eye:	n/a
4	chr12:7793353-7793403	HMEC	breast:	n/a
5	chr12:7777092-7777142	CMK	blood:	n/a
6	chr12:7781169-7781219	AG10803	skin:	n/a
7	chr12:7793361-7793411	NH-A	brain:	n/a
8	chr12:7781431-7781481	HIPEpiC	eye:	n/a
9	chr12:7780736-7780786	RPTEC	kidney:	n/a
10	chr12:7781431-7781481	HCT-116	colon:	n/a
11	chr12:7777092-7777142	T-47D	breast:	n/a
12	chr12:7780736-7780786	IMR90	lung:	fetal
13	chr12:7781004-7781054	AG10803	skin:	n/a
14	chr12:7793353-7793403	Hela-S3	cervix:	n/a
15	chr12:7793361-7793411	HCF	heart:	n/a
16	chr12:7781004-7781054	BE2_C	brain:	n/a
17	chr12:7780736-7780786	Jurkat	blood:	n/a
18	chr12:7781169-7781219	NT2-D1	testis:	n/a
19	chr12:7793361-7793411	ProgFib	skin:	n/a
20	chr12:7781169-7781219	HIPEpiC	eye:	n/a
21	chr12:7777092-7777142	HCM	heart:	n/a
22	chr12:7781093-7781143	ECC-1	luminal epithelium:	n/a
23	chr12:7793361-7793411	NHDF-neo	bronchial:	n/a
24	chr12:7793353-7793403	AG10803	skin:	n/a
25	chr12:7781004-7781054	PFSK-1	brain:	n/a
26	chr12:7793353-7793403	HEK293	kidney:	embryo
27	chr12:7793353-7793403	SKMC	muscle:	n/a
28	chr12:7793361-7793411	HCM	heart:	n/a
29	chr12:7781004-7781054	BJ	skin:	n/a
30	chr12:7781431-7781481	GM06990	blood:	n/a
31	chr12:7781169-7781219	MCF-7	breast:	n/a
32	chr12:7793361-7793411	SKMC	muscle:	n/a
33	chr12:7781288-7781338	AoSMC	blood vessel:	n/a
34	chr12:7781169-7781219	HRPEpiC	eye:	n/a
35	chr12:7793361-7793411	GM12891	blood:	n/a
36	chr12:7781004-7781054	ovcar-3	ovarian:	n/a
37	chr12:7777092-7777142	PANC-1	pancreas:	n/a
38	chr12:7777092-7777142	SAEC	small airway:	n/a
39	chr12:7781431-7781481	HUVEC	blood vessel:	n/a
40	chr12:7781288-7781338	GM06990	blood:	n/a
41	chr12:7777092-7777142	AG04449	skin:	fetal
42	chr12:7780736-7780786	SK-N-SH	brain:	n/a
43	chr12:7780736-7780786	LNCaP	prostate:	n/a
44	chr12:7793353-7793403	GM12878	blood:	n/a
45	chr12:7781004-7781054	HMEC	breast:	n/a
46	chr12:7781288-7781338	RPTEC	kidney:	n/a
47	chr12:7780736-7780786	T-47D	breast:	n/a
48	chr12:7780736-7780786	ECC-1	luminal epithelium:	n/a
49	chr12:7781288-7781338	HEEpiC	esophagus:	n/a
50	chr12:7781093-7781143	T-47D	breast:	n/a

(count:14 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr12:7052361..7055203-chr12:7790062..7793106,4	MCF-7	breast:
2	chr12:7368777..7371276-chr12:7789054..7791793,2	MCF-7	breast:
3	chr12:7052745..7054804-chr12:7789999..7792539,2	K562	blood:
4	chr12:7770562..7771464-chr12:7790685..7791995,3	MCF-7	breast:
5	chr12:7785661..7787296-chr12:7958245..7961143,2	K562	blood:
6	chr12:7737260..7737767-chr12:7791332..7791965,2	K562	blood:
7	chr12:7770501..7771317-chr12:7790977..7791858,2	MCF-7	breast:
8	chr12:7371937..7372879-chr12:7790988..7791868,4	MCF-7	breast:
9	chr12:7527269..7527851-chr12:7790980..7791613,2	MCF-7	breast:
10	chr12:7371612..7372892-chr12:7790964..7791617,4	K562	blood:
11	chr12:7741041..7741545-chr12:7790979..7791656,2	MCF-7	breast:
12	chr12:7770501..7771317-chr12:7790977..7791858,2	MCF-7	breast:
13	chr12:7294785..7295337-chr12:7791387..7791900,2	K562	blood:
14	chr12:7770562..7771464-chr12:7790685..7791995,3	MCF-7	breast:

No data

Variant related genes	Relation type
NIFKP3	TF binding region
NIFKP3	CpG island
ENSG00000111678	chromatin interactions
ENSG00000238923	chromatin interactions
ENSG00000272173	chromatin interactions

Extended variants
information (count: 720 )
Associated
traits (count: 82 )

Variant overlapped rSNPs/rCNVs (count:720 , 50 per page) page: 1 2 3 4 5 6 7 ... 15

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs7135842	chr12:7760124-7760125	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs1946125	chr12:7760149-7760150	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
3	rs182113019	chr12:7760168-7760169	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs186669858	chr12:7760207-7760208	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs140766773	chr12:7760255-7760256	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs539873664	chr12:7760305-7760306	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs559962888	chr12:7760341-7760342	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs370875201	chr12:7760414-7760415	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs191436291	chr12:7760434-7760435	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs12231148	chr12:7760470-7760471	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
11	rs183223199	chr12:7760479-7760480	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs111283080	chr12:7760500-7760501	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs75323972	chr12:7760555-7760556	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs367915964	chr12:7760588-7760589	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs188885713	chr12:7760610-7760611	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs12227008	chr12:7760678-7760679	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
17	rs4883419	chr12:7760726-7760727	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
18	rs375054871	chr12:7760742-7760743	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs35226945	chr12:7760747-7760748	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs11609303	chr12:7760886-7760887	Active TSS Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
21	rs7136877	chr12:7760907-7760908	Active TSS Weak transcription Enhancers	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
22	rs367828759	chr12:7760981-7760982	Active TSS Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
23	rs12370935	chr12:7761029-7761030	Enhancers Transcr. at gene 5' and 3' Weak transcription ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
24	rs371964853	chr12:7761087-7761088	Enhancers Transcr. at gene 5' and 3' Weak transcription ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
25	rs569823911	chr12:7761234-7761235	Enhancers Transcr. at gene 5' and 3' Weak transcription ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
26	rs7302914	chr12:7761240-7761241	Enhancers Transcr. at gene 5' and 3' Weak transcription ZNF genes & repeats	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
27	rs146626771	chr12:7761243-7761244	Enhancers Transcr. at gene 5' and 3' Weak transcription ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
28	rs115357136	chr12:7761275-7761276	Enhancers Transcr. at gene 5' and 3' Weak transcription ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
29	rs79101916	chr12:7761309-7761310	Enhancers Transcr. at gene 5' and 3' Weak transcription ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
30	rs1419976	chr12:7761373-7761374	Enhancers Transcr. at gene 5' and 3' Weak transcription ZNF genes & repeats	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
31	rs548901396	chr12:7761385-7761386	Enhancers Transcr. at gene 5' and 3' Weak transcription ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
32	rs565531157	chr12:7761415-7761416	Weak transcription Enhancers ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
33	rs141439033	chr12:7761455-7761456	Weak transcription Enhancers ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
34	rs145085067	chr12:7761493-7761494	Weak transcription Enhancers ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
35	rs10845510	chr12:7761579-7761580	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
36	rs146862503	chr12:7761681-7761682	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs369908384	chr12:7761700-7761701	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs12318273	chr12:7761804-7761805	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
39	rs193078344	chr12:7761897-7761898	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs557919513	chr12:7761977-7761978	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs35846069	chr12:7762017-7762018	Weak transcription Enhancers Flanking Active TSS Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
42	rs571722308	chr12:7762032-7762033	Weak transcription Enhancers Flanking Active TSS Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
43	rs542915542	chr12:7762104-7762105	Weak transcription Enhancers Flanking Active TSS Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
44	rs57562412	chr12:7762124-7762125	Weak transcription Enhancers Flanking Active TSS Active TSS	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
45	rs577949344	chr12:7762172-7762173	Weak transcription Enhancers Flanking Active TSS Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
46	rs373393731	chr12:7762187-7762188	Weak transcription Enhancers Flanking Active TSS Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
47	rs12229835	chr12:7762227-7762228	Active TSS Flanking Active TSS Enhancers	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
48	rs73258843	chr12:7762267-7762268	Active TSS Flanking Active TSS Enhancers	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
49	rs140771273	chr12:7762282-7762283	Active TSS Flanking Active TSS Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
50	rs74239598	chr12:7762328-7762329	Active TSS Flanking Active TSS Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:82)

Disease	PMID	Source
Acute lymphoblastic leukemia	22237106	CNVD
Breast cancer	17133270	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Medulloblastoma	16968546	CNVD
Ovine squamous-cell carcinoma	17599052	CNVD
Hepatocellular carcinoma	16750200	CNVD
T-cell acute lymphoblastic leukemia	20065082	CNVD
Breast cancer	22032731	CNVD
Cancer	21183584	CNVD
Myxofibrosarcoma	16751306	CNVD
Non-small cell lung cancer	21829676	CNVD
Ovarian neoplasms	16753589	CNVD
Prostate cancer	21965145	CNVD
Acute myeloid leukemia	16864856	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Disorders of sex development	21048976	CNVD
Glioblastoma multiforme	21080181	CNVD
Liposarcoma	21253554	CNVD
Prostate cancer	19156837	CNVD
Emphysema	19352772	CNVD
Medulloblastoma	21979893	CNVD
Basal cell lymphoma	17053054	CNVD
Malignant germ cell tumour	17285132	CNVD
Melanoma	18172304	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Wilms tumour	21544195	CNVD
Squamous cell cancer	21044232	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	19960244	CNVD
Endometrial cancer	22040021	CNVD
Colorectal cancer	20709793	CNVD
Breast cancer	21264507	CNVD
Cancer	16751803	CNVD
Testicular cancer	18059402	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Seminomas	18059402	CNVD
Esophageal cancer	21851588	CNVD
Lung cancer	20668451	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Testicular germ cell tumor	18059402	CNVD
Malaria	21533027	CNVD
Chronic lymphocytic leukemia	22228453	CNVD
Chronic lymphocytic leukemia	21670202	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Ewing''s sarcoma	17952124	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Breast cancer	21858162	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21785460	CNVD
Myelodysplastic syndrome	21251322	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Autism	22495311	CNVD
Lung cancer	18438408	CNVD
small cell lung cancer	20016488	CNVD
Cancer	20164919	CNVD
Epilepsy	21858020	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Breast cancer	21364760	CNVD
Myelofibrosis	22110671	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
craniofacial dysmorphism	21918468	CNVD
Malignant peripheral nerve sheath tumor	19844265	CNVD
Chronic lymphocytic leukemia	21049055	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Alzheimer''s disease	17160897	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Medullary thyroid carcinoma	18765511	CNVD
early-passage human iPS cells	21368824	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Non-syndromic sensorineural hearing loss	17289997	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Nasopharyngeal cancer	20548289	CNVD
head and neck squamous cell carcinoma	19451471	CNVD

Chromatin state (count:466 , 50 per page) page: 1 2 3 4 5 6 7 ... 10

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:7758600-7762200	Enhancers	Primary hematopoietic stem cells	blood
2	chr12:7759200-7762200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
3	chr12:7759400-7763000	Enhancers	Primary hematopoietic stem cells short term culture	blood
4	chr12:7759400-7763400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
5	chr12:7759800-7761000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
6	chr12:7760000-7761000	Weak transcription	Fetal Thymus	thymus
7	chr12:7760000-7761800	Enhancers	HMEC	breast
8	chr12:7760200-7760400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
9	chr12:7760200-7761800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
10	chr12:7760400-7762400	Enhancers	NHEK	skin
11	chr12:7760600-7762200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
12	chr12:7760800-7761000	Active TSS	H1 Derived Mesenchymal Stem Cells	ES cell derived
13	chr12:7760800-7761600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
14	chr12:7760800-7761800	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
15	chr12:7760800-7762600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
16	chr12:7760800-7763000	Enhancers	Thymus	Thymus
17	chr12:7761000-7761400	Enhancers	H1 Cell Line	embryonic stem cell
18	chr12:7761000-7761400	Transcr. at gene 5' and 3'	H1 Derived Mesenchymal Stem Cells	ES cell derived
19	chr12:7761000-7761400	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
20	chr12:7761000-7761400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
21	chr12:7761000-7761600	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
22	chr12:7761000-7761600	Enhancers	Esophagus	oesophagus
23	chr12:7761000-7761600	Enhancers	Fetal Thymus	thymus
24	chr12:7761000-7761600	ZNF genes & repeats	Lung	lung
25	chr12:7761400-7761600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
26	chr12:7761400-7762200	Enhancers	Primary monocytes fromperipheralblood	blood
27	chr12:7761600-7762000	Enhancers	Monocytes-CD14+_RO01746	blood
28	chr12:7762000-7762600	Active TSS	Osteobl	bone
29	chr12:7762000-7763000	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
30	chr12:7762200-7762600	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
31	chr12:7762200-7762600	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
32	chr12:7762200-7762600	Flanking Active TSS	Primary monocytes fromperipheralblood	blood
33	chr12:7762200-7762600	Flanking Active TSS	Primary hematopoietic stem cells	blood
34	chr12:7762200-7762600	Active TSS	NHDF-Ad	bronchial
35	chr12:7762200-7763000	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
36	chr12:7762400-7762800	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
37	chr12:7762600-7762800	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
38	chr12:7762600-7763000	Enhancers	Primary monocytes fromperipheralblood	blood
39	chr12:7762600-7763000	Enhancers	Primary hematopoietic stem cells	blood
40	chr12:7762600-7763000	Enhancers	NHDF-Ad	bronchial
41	chr12:7762600-7763000	Enhancers	Osteobl	bone
42	chr12:7762800-7763200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
43	chr12:7763000-7763200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
44	chr12:7763000-7763200	Enhancers	Monocytes-CD14+_RO01746	blood
45	chr12:7763000-7764600	Weak transcription	Primary monocytes fromperipheralblood	blood
46	chr12:7763200-7764600	Weak transcription	Monocytes-CD14+_RO01746	blood
47	chr12:7763200-7765000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
48	chr12:7763400-7765200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
49	chr12:7764600-7765200	Enhancers	Monocytes-CD14+_RO01746	blood
50	chr12:7764600-7765800	Enhancers	Primary monocytes fromperipheralblood	blood

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links