Variant report

Variant nsv900092
Chromosome Location chr13:54362624-54419426
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:54361400-54363000 Enhancers HUES6 Cell Line embryonic stem cell
2 chr13:54361400-54363400 Enhancers HUES48 Cell Line embryonic stem cell
3 chr13:54361400-54363400 Enhancers iPS-15b Cell Line embryonic stem cell
4 chr13:54361600-54363200 Enhancers HUES64 Cell Line embryonic stem cell
5 chr13:54361600-54363200 Enhancers iPS-20b Cell Line embryonic stem cell
6 chr13:54362000-54363400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
7 chr13:54362200-54363000 Enhancers ES-I3 Cell Line embryonic stem cell
8 chr13:54362200-54363000 Enhancers ES-WA7 Cell Line embryonic stem cell
9 chr13:54362200-54363000 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
10 chr13:54362200-54363000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
11 chr13:54362200-54363400 Enhancers iPS-18 Cell Line embryonic stem cell
12 chr13:54362400-54363000 Enhancers H1 Cell Line embryonic stem cell
13 chr13:54377600-54378000 Enhancers HUES48 Cell Line embryonic stem cell
14 chr13:54380600-54381600 Enhancers Fetal Heart heart
15 chr13:54380800-54381200 Enhancers Fetal Lung lung
16 chr13:54381200-54381600 Weak transcription Fetal Lung lung
17 chr13:54381600-54382000 Flanking Active TSS Fetal Heart heart
18 chr13:54381600-54382600 Enhancers Fetal Lung lung
19 chr13:54382000-54382600 Enhancers Fetal Heart heart
20 chr13:54390600-54390800 Flanking Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
21 chr13:54390800-54391000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
22 chr13:54391000-54391200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
23 chr13:54391200-54391600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
24 chr13:54391600-54396400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
25 chr13:54395000-54396000 Enhancers Fetal Heart heart
26 chr13:54395200-54396600 Enhancers Fetal Brain Male brain
27 chr13:54395400-54395800 Enhancers Brain Substantia Nigra brain
28 chr13:54395400-54396600 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
29 chr13:54395600-54396200 Active TSS Stomach Smooth Muscle stomach
30 chr13:54395600-54396400 Enhancers Breast Myoepithelial Primary Cells Breast
31 chr13:54395800-54396000 Active TSS Brain Substantia Nigra brain
32 chr13:54395800-54396400 Active TSS Brain Angular Gyrus brain
33 chr13:54395800-54396400 Active TSS Brain Anterior Caudate brain
34 chr13:54395800-54396400 Active TSS Brain Hippocampus Middle brain
35 chr13:54395800-54396400 Active TSS Brain Inferior Temporal Lobe brain
36 chr13:54395800-54396600 Active TSS Brain Cingulate Gyrus brain
37 chr13:54395800-54396600 Active TSS Brain Dorsolateral Prefrontal Cortex brain
38 chr13:54396000-54396400 Bivalent/Poised TSS Brain Substantia Nigra brain
39 chr13:54396000-54396400 Flanking Active TSS Fetal Heart heart
40 chr13:54396400-54396600 Flanking Active TSS Brain Angular Gyrus brain
41 chr13:54396400-54397200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
42 chr13:54396400-54397200 Enhancers Fetal Heart heart
43 chr13:54396800-54397000 Bivalent Enhancer Brain Substantia Nigra brain
44 chr13:54397200-54398200 Weak transcription Fetal Heart heart
45 chr13:54398200-54398400 Enhancers Fetal Heart heart
46 chr13:54405400-54405800 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr13:54405400-54405800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived

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