Variant report

Variant	nsv902161
Chromosome Location	chr14:84699866-84769903
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:5)
LncRNA
region (count:2)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:5 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr14:84698224..84700933-chr14:84701526..84704315,2	K562	blood:
2	chr1:184773101..184774074-chr14:84719732..84720658,2	MCF-7	breast:
3	chr14:84698224..84700933-chr14:84701526..84704315,2	K562	blood:
4	chr14:84751809..84754653-chr14:84755331..84758306,2	MCF-7	breast:
5	chr14:84751809..84754653-chr14:84755331..84758306,2	MCF-7	breast:

(count:2 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-SEL1L-10	chr14:84765265-84765469	XLOC_011092
2	lnc-SEL1L-10	chr14:84761936-84761961	XLOC_011092

No data

Extended variants
information (count: 1633 )
Associated
traits (count: 64 )

Variant overlapped rSNPs/rCNVs (count:1633 , 50 per page) page: 1 2 3 4 5 6 7 ... 33

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs10141558	chr14:84699866-84699867	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs146616132	chr14:84699876-84699877	Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs527438650	chr14:84699881-84699882	Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs530097845	chr14:84699885-84699886	Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs189638026	chr14:84699892-84699893	Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs549049116	chr14:84699896-84699897	Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs199615521	chr14:84699900-84699901	Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs567378773	chr14:84699918-84699919	Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs538061650	chr14:84699919-84699920	Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs139154247	chr14:84699929-84699930	Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs183417092	chr14:84699941-84699942	Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs538929589	chr14:84699942-84699943	Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs187954703	chr14:84699944-84699945	Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs370014251	chr14:84699967-84699968	Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs553177072	chr14:84700811-84700812	Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs369391232	chr14:84700844-84700845	Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs532369757	chr14:84700851-84700852	Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs148271842	chr14:84700874-84700875	Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs565974123	chr14:84700879-84700880	Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs115566858	chr14:84700949-84700950	Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs372262262	chr14:84700967-84700968	Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs113181521	chr14:84700976-84700977	Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs72629351	chr14:84700980-84700981	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
24	rs537983404	chr14:84701011-84701012	Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs371543655	chr14:84701046-84701047	Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs375886622	chr14:84701049-84701050	Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs141382712	chr14:84701120-84701121	Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs539238475	chr14:84701152-84701153	Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs189573544	chr14:84701169-84701170	Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs572743527	chr14:84701193-84701194	Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs542940903	chr14:84701206-84701207	Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs375226103	chr14:84701220-84701221	Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs560899462	chr14:84701221-84701222	Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs576082988	chr14:84701232-84701233	Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs543414121	chr14:84701241-84701242	Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs531072551	chr14:84701248-84701249	Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs532068115	chr14:84701274-84701275	Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs117814750	chr14:84702648-84702649	Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs558628122	chr14:84702649-84702650	Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs576748541	chr14:84702651-84702652	Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs145485749	chr14:84702693-84702694	Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs551102266	chr14:84702703-84702704	Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs375289755	chr14:84702713-84702714	Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs574773559	chr14:84702732-84702733	Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs149005188	chr14:84702741-84702742	Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs113068940	chr14:84702771-84702772	Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs530751777	chr14:84702776-84702777	Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs560195544	chr14:84702817-84702818	Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs77302018	chr14:84702836-84702837	Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs397955177	chr14:84702844-84702845	Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:64)

Disease	PMID	Source
Esophageal cancer	21851588	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Retinoblastoma	21504564	CNVD
High-proliferative meningiomas	17937814	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Autism	22495311	CNVD
Non-small cell lung cancer	21044232	CNVD
Renal cell carcinoma	19461508	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Melanoma	18172304	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Medulloblastoma	21979893	CNVD
Oral cancer	21386901	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Hepatocellular carcinoma	22174799	CNVD
Neuroblastoma	19435921	CNVD
Colorectal cancer	19359472	CNVD
Breast cancer	17899364	CNVD
Gastrointestinal stromal cancer	19259404	CNVD
Gastrointestinal stromal cancer	17535989	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Paraganglioma	17535989	CNVD
Pulmonary chondroma	17535989	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Renal cell carcinoma	21668985	CNVD
Chronic myeloid leukemia	20724749	CNVD
Wilms tumour	21544195	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Urothelial carcinoma	21177765	CNVD
Breast cancer	21858162	CNVD
Lung cancer	18438408	CNVD
Colorectal cancer	16272173	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Colorectal cancer	16774939	CNVD
Malignant mesothelioma	18160781	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Neuroblastoma	18923191	CNVD
Barrett''s syndrome	19417022	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Basal cell lymphoma	17053054	CNVD
cataract	16735990	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Breast cancer	16608533	CNVD
Gastrointestinal stromal cancer	20877625	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
small cell lung cancer	20016488	CNVD
Developmental delay	21147756	CNVD
Breast cancer	17603634	CNVD
Glioblastoma	21080181	CNVD
Breast cancer	17133270	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Cancer	20164920	CNVD
Breast cancer	21364760	CNVD
Myelofibrosis	22110671	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:150 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:84699600-84700000	Enhancers	Placenta Amnion	Placenta Amnion
2	chr14:84700800-84701400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
3	chr14:84702600-84703200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
4	chr14:84702600-84703200	Enhancers	iPS-18 Cell Line	embryonic stem cell
5	chr14:84703600-84705600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
6	chr14:84704600-84705000	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
7	chr14:84707800-84708400	Enhancers	Stomach Mucosa	stomach
8	chr14:84709600-84710200	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
9	chr14:84716000-84720600	Enhancers	HUVEC	blood vessel
10	chr14:84716400-84716800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
11	chr14:84716600-84717000	Enhancers	Fetal Kidney	kidney
12	chr14:84716600-84717400	Enhancers	Fetal Stomach	stomach
13	chr14:84716800-84720400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
14	chr14:84717000-84717400	Weak transcription	Fetal Kidney	kidney
15	chr14:84717200-84717400	Enhancers	ES-I3 Cell Line	embryonic stem cell
16	chr14:84717200-84717600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
17	chr14:84717400-84717600	Enhancers	Fetal Kidney	kidney
18	chr14:84717400-84717600	Enhancers	Stomach Mucosa	stomach
19	chr14:84717400-84718400	Weak transcription	Fetal Stomach	stomach
20	chr14:84717400-84719600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
21	chr14:84717600-84718200	Enhancers	Fetal Lung	lung
22	chr14:84717600-84720600	Weak transcription	Fetal Kidney	kidney
23	chr14:84717600-84722400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
24	chr14:84718200-84718400	Enhancers	Stomach Mucosa	stomach
25	chr14:84718400-84718600	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
26	chr14:84718400-84719800	Enhancers	Fetal Stomach	stomach
27	chr14:84718600-84718800	Enhancers	Fetal Muscle Leg	muscle
28	chr14:84718600-84719000	Enhancers	Ovary	ovary
29	chr14:84718600-84719400	Enhancers	Adipose Nuclei	Adipose
30	chr14:84718600-84719600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
31	chr14:84718600-84720000	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
32	chr14:84718600-84720600	Enhancers	iPS-18 Cell Line	embryonic stem cell
33	chr14:84718800-84719600	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
34	chr14:84719000-84719200	Enhancers	HUES6 Cell Line	embryonic stem cell
35	chr14:84719200-84719400	Enhancers	iPS-15b Cell Line	embryonic stem cell
36	chr14:84719200-84719800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
37	chr14:84719200-84722000	Enhancers	HUES64 Cell Line	embryonic stem cell
38	chr14:84719400-84719800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
39	chr14:84719400-84719800	Enhancers	Placenta Amnion	Placenta Amnion
40	chr14:84719400-84720600	Weak transcription	HUES6 Cell Line	embryonic stem cell
41	chr14:84719400-84720600	Weak transcription	Adipose Nuclei	Adipose
42	chr14:84719600-84719800	Enhancers	ES-I3 Cell Line	embryonic stem cell
43	chr14:84719600-84719800	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
44	chr14:84719600-84720600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
45	chr14:84719600-84720600	Enhancers	HUES48 Cell Line	embryonic stem cell
46	chr14:84719600-84720600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
47	chr14:84719600-84720600	Enhancers	iPS-20b Cell Line	embryonic stem cell
48	chr14:84719800-84720000	Flanking Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
49	chr14:84719800-84720200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
50	chr14:84719800-84720600	Weak transcription	ES-I3 Cell Line	embryonic stem cell

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