No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs9959517 |
chr18:12057195-12057196 |
Weak transcription ZNF genes & repeats Enhancers
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
2 |
rs571439078 |
chr18:12057201-12057202 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
3 |
rs538841530 |
chr18:12057202-12057203 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
4 |
rs557928956 |
chr18:12057239-12057240 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
5 |
rs573287355 |
chr18:12057254-12057255 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
6 |
rs533935362 |
chr18:12057268-12057269 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
7 |
rs531253322 |
chr18:12057282-12057283 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
8 |
rs555380702 |
chr18:12057309-12057310 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
9 |
rs573981222 |
chr18:12057347-12057348 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
10 |
rs374455994 |
chr18:12057348-12057349 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
11 |
rs544534706 |
chr18:12057367-12057368 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
12 |
rs562868758 |
chr18:12057378-12057379 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
13 |
rs575315511 |
chr18:12057379-12057380 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
14 |
rs9959781 |
chr18:12057389-12057390 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
15 |
rs189661116 |
chr18:12057400-12057401 |
Weak transcription ZNF genes & repeats Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
16 |
rs9959774 |
chr18:12057403-12057404 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
17 |
rs527429249 |
chr18:12057409-12057410 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
18 |
rs370308283 |
chr18:12057422-12057423 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
19 |
rs548990939 |
chr18:12057451-12057452 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
20 |
rs115577825 |
chr18:12057455-12057456 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
21 |
rs181498192 |
chr18:12057492-12057493 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
22 |
rs375315532 |
chr18:12057498-12057499 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
23 |
rs185795660 |
chr18:12057550-12057551 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
24 |
rs538405640 |
chr18:12057568-12057569 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
25 |
rs547613748 |
chr18:12057576-12057577 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
26 |
rs528287937 |
chr18:12057577-12057578 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
27 |
rs9960082 |
chr18:12057635-12057636 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
28 |
rs555321749 |
chr18:12057670-12057671 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
29 |
rs573331433 |
chr18:12057671-12057672 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
30 |
rs200165173 |
chr18:12057693-12057694 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
31 |
rs573671754 |
chr18:12057706-12057707 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
32 |
rs565910244 |
chr18:12057720-12057721 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
33 |
rs73406519 |
chr18:12057731-12057732 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
34 |
rs141694675 |
chr18:12057744-12057745 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
35 |
rs548033250 |
chr18:12057750-12057751 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
36 |
rs565370007 |
chr18:12057751-12057752 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
37 |
rs578199717 |
chr18:12057808-12057809 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
38 |
rs9960429 |
chr18:12057809-12057810 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
39 |
rs73947225 |
chr18:12057812-12057813 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
40 |
rs572032165 |
chr18:12057844-12057845 |
Weak transcription Strong transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
41 |
rs190659293 |
chr18:12057845-12057846 |
Weak transcription Strong transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
42 |
rs9960443 |
chr18:12057854-12057855 |
Weak transcription Strong transcription
|
TF binding region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
43 |
rs531291613 |
chr18:12057875-12057876 |
Weak transcription Strong transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
44 |
rs181863284 |
chr18:12057878-12057879 |
Weak transcription Strong transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
45 |
rs565027489 |
chr18:12057882-12057883 |
Weak transcription Strong transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
46 |
rs7237877 |
chr18:12057904-12057905 |
Weak transcription Strong transcription
|
TF binding region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
47 |
rs150101724 |
chr18:12057910-12057911 |
Weak transcription Strong transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
48 |
rs138386103 |
chr18:12057913-12057914 |
Weak transcription Strong transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
49 |
rs7236715 |
chr18:12057923-12057924 |
Weak transcription Strong transcription
|
TF binding region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
50 |
rs372950568 |
chr18:12057936-12057937 |
Weak transcription Strong transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|