Variant report

Variant	nsv911307
Chromosome Location	chr19:19631655-19657143
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1166)
CpG islands
(count:2686)
Chromatin interactive
region (count:64)
LncRNA
region (count:1)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1166 , 50 per page) page: 1 2 3 4 5 6 7 ... 24

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr19:19643172-19643308	HepG2	liver:	n/a	n/a
2	ARID3A	chr19:19643039-19643285	K562	blood:	n/a	n/a
3	ATF2	chr19:19643002-19643357	H1-hESC	embryonic stem cell:	n/a	n/a
4	ATF2	chr19:19637521-19638010	GM12878	blood:	n/a	n/a
5	BACH1	chr19:19643055-19643321	H1-hESC	embryonic stem cell:	n/a	n/a
6	BACH1	chr19:19652480-19652537	K562	blood:	n/a	n/a
7	BCL3	chr19:19642992-19643431	GM12878	blood:	n/a	n/a
8	BCLAF1	chr19:19651011-19651282	GM12878	blood:	n/a	n/a
9	BCLAF1	chr19:19642885-19643463	GM12878	blood:	n/a	n/a
10	BHLHE40	chr19:19637576-19637997	GM12878	blood:	n/a	n/a
11	BHLHE40	chr19:19643095-19643650	K562	blood:	n/a	n/a
12	BHLHE40	chr19:19651107-19651318	K562	blood:	n/a	n/a
13	BRCA1	chr19:19643004-19643343	H1-hESC	embryonic stem cell:	n/a	n/a
14	CBX3	chr19:19650999-19651343	K562	blood:	n/a	n/a
15	CBX3	chr19:19650843-19651726	K562	blood:	n/a	n/a
16	CBX3	chr19:19642940-19643536	K562	blood:	n/a	n/a
17	CCNT2	chr19:19643073-19643379	K562	blood:	n/a	n/a
18	CCNT2	chr19:19648946-19649057	K562	blood:	n/a	n/a
19	CCNT2	chr19:19651060-19651269	K562	blood:	n/a	n/a
20	CCNT2	chr19:19651900-19652084	K562	blood:	n/a	chr19:19652061-19652070
21	CEBPB	chr19:19640664-19640864	H1-hESC	embryonic stem cell:	n/a	chr19:19640747-19640758
22	CEBPB	chr19:19640577-19640893	K562	blood:	n/a	chr19:19640747-19640758
23	CEBPB	chr19:19640634-19640829	HepG2	liver:	n/a	chr19:19640747-19640758
24	CEBPB	chr19:19640605-19640922	IMR90	lung:	n/a	chr19:19640747-19640758
25	CHD2	chr19:19641388-19641458	H1-hESC	embryonic stem cell:	n/a	n/a
26	CHD2	chr19:19641538-19641790	K562	blood:	n/a	n/a
27	CHD2	chr19:19643002-19643308	HepG2	liver:	n/a	n/a
28	CHD2	chr19:19652102-19652114	H1-hESC	embryonic stem cell:	n/a	n/a
29	CHD2	chr19:19639528-19639561	H1-hESC	embryonic stem cell:	n/a	n/a
30	CHD2	chr19:19643029-19643332	Hela-S3	cervix:	n/a	n/a
31	CHD2	chr19:19637551-19637876	GM12878	blood:	n/a	n/a
32	CHD2	chr19:19643044-19643210	K562	blood:	n/a	n/a
33	CREB1	chr19:19651182-19651691	ECC-1	luminal epithelium:	n/a	n/a
34	CREB1	chr19:19651197-19651727	GM12878	blood:	n/a	n/a
35	CREB1	chr19:19651057-19651665	K562	blood:	n/a	n/a
36	CREB1	chr19:19651179-19651701	ECC-1	luminal epithelium:	n/a	n/a
37	CREB1	chr19:19650975-19651663	H1-hESC	embryonic stem cell:	n/a	n/a
38	CTCF	chr19:19642995-19643341	Lung_OC	lung:	n/a	chr19:19643194-19643207 chr19:19643192-19643208 chr19:19643191-19643209 chr19:19643194-19643203 chr19:19643194-19643207 chr19:19643196-19643206 chr19:19643193-19643214
39	CTCF	chr19:19644808-19644898	MCF-7	breast:	n/a	n/a
40	CTCF	chr19:19642985-19643359	GM19238	blood:	n/a	chr19:19643194-19643207 chr19:19643192-19643208 chr19:19643191-19643209 chr19:19643194-19643203 chr19:19643194-19643207 chr19:19643196-19643206 chr19:19643193-19643214
41	CTCF	chr19:19641340-19641490	HMF	breast:	n/a	chr19:19641410-19641431 chr19:19641379-19641392 chr19:19641408-19641426
42	CTCF	chr19:19641320-19641470	WERI-Rb-1	eye:	n/a	chr19:19641410-19641431 chr19:19641379-19641392 chr19:19641408-19641426
43	CTCF	chr19:19643140-19643290	HMEC	breast:	n/a	chr19:19643194-19643207 chr19:19643192-19643208 chr19:19643191-19643209 chr19:19643194-19643203 chr19:19643194-19643207 chr19:19643196-19643206 chr19:19643193-19643214
44	CTCF	chr19:19643120-19643270	GM12871	blood:	n/a	chr19:19643194-19643207 chr19:19643192-19643208 chr19:19643191-19643209 chr19:19643194-19643203 chr19:19643194-19643207 chr19:19643196-19643206 chr19:19643193-19643214
45	CTCF	chr19:19641320-19641470	GM12869	blood:	n/a	chr19:19641410-19641431 chr19:19641379-19641392 chr19:19641408-19641426
46	CTCF	chr19:19642858-19643357	GM19240	blood:	n/a	chr19:19643194-19643207 chr19:19643192-19643208 chr19:19643191-19643209 chr19:19643194-19643203 chr19:19643194-19643207 chr19:19643196-19643206 chr19:19643193-19643214
47	CTCF	chr19:19643120-19643270	GM12867	blood:	n/a	chr19:19643194-19643207 chr19:19643192-19643208 chr19:19643191-19643209 chr19:19643194-19643203 chr19:19643194-19643207 chr19:19643196-19643206 chr19:19643193-19643214
48	CTCF	chr19:19651939-19652123	NHEK	skin:	n/a	n/a
49	CTCF	chr19:19637060-19637210	HA-sp	spinal cord:	n/a	n/a
50	CTCF	chr19:19643120-19643270	HA-sp	spinal cord:	n/a	chr19:19643194-19643207 chr19:19643192-19643208 chr19:19643191-19643209 chr19:19643194-19643203 chr19:19643194-19643207 chr19:19643196-19643206 chr19:19643193-19643214

(count:2686 , 50 per page) page: 1 2 3 4 5 6 7 ... 54

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr19:19643534-19643584	K562	blood:	n/a
2	chr19:19651235-19651285	PrEC	prostate:	n/a
3	chr19:19643534-19643584	K562	blood:	n/a
4	chr19:19651235-19651285	PrEC	prostate:	n/a
5	chr19:19637361-19637411	HCT-116	colon:	n/a
6	chr19:19645610-19645660	U87	brain:	n/a
7	chr19:19655352-19655402	PFSK-1	brain:	n/a
8	chr19:19651235-19651285	NH-A	brain:	n/a
9	chr19:19656163-19656213	ovcar-3	ovarian:	n/a
10	chr19:19656473-19656523	HCT-116	colon:	n/a
11	chr19:19656473-19656523	GM06990	blood:	n/a
12	chr19:19649054-19649104	SK-N-SH_RA	brain:	n/a
13	chr19:19648991-19649041	GM12891	blood:	n/a
14	chr19:19648939-19648989	SK-N-SH_RA	brain:	n/a
15	chr19:19639581-19639631	HIPEpiC	eye:	n/a
16	chr19:19655352-19655402	HAEpiC	amniotic membrane:	n/a
17	chr19:19643534-19643584	A549	lung:	n/a
18	chr19:19651962-19652012	HNPCEpiC	eye:	n/a
19	chr19:19652596-19652646	HMEC	breast:	n/a
20	chr19:19647899-19647949	AG04449	skin:	fetal
21	chr19:19655748-19655798	AG04450	lung:	fetal
22	chr19:19651867-19651917	HUVEC	blood vessel:	n/a
23	chr19:19649144-19649194	ovcar-3	ovarian:	n/a
24	chr19:19647899-19647949	ProgFib	skin:	n/a
25	chr19:19641678-19641728	SAEC	small airway:	n/a
26	chr19:19656163-19656213	HUVEC	blood vessel:	n/a
27	chr19:19639568-19639618	PANC-1	pancreas:	n/a
28	chr19:19643534-19643584	NB4	blood:	n/a
29	chr19:19648914-19648964	SKMC	muscle:	n/a
30	chr19:19639970-19640020	PFSK-1	brain:	n/a
31	chr19:19637361-19637411	GM12878	blood:	n/a
32	chr19:19643172-19643222	SK-N-MC	brain:	n/a
33	chr19:19649144-19649194	HMEC	breast:	n/a
34	chr19:19641678-19641728	HUVEC	blood vessel:	n/a
35	chr19:19641678-19641728	A549	lung:	n/a
36	chr19:19641678-19641728	GM12892	blood:	n/a
37	chr19:19651962-19652012	SKMC	muscle:	n/a
38	chr19:19643269-19643319	SK-N-SH_RA	brain:	n/a
39	chr19:19643534-19643584	GM19239	blood:	n/a
40	chr19:19649041-19649091	HepG2	liver:	n/a
41	chr19:19651962-19652012	CMK	blood:	n/a
42	chr19:19655748-19655798	HNPCEpiC	eye:	n/a
43	chr19:19639596-19639646	HL-60	blood:	n/a
44	chr19:19652066-19652116	NHDF-neo	bronchial:	n/a
45	chr19:19651235-19651285	GM06990	blood:	n/a
46	chr19:19650766-19650816	AG04450	lung:	fetal
47	chr19:19644143-19644193	LNCaP	prostate:	n/a
48	chr19:19652066-19652116	ProgFib	skin:	n/a
49	chr19:19649041-19649091	NT2-D1	testis:	n/a
50	chr19:19656163-19656213	HCPEpiC	choroid plexus:	n/a

(count:64 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr19:19642579..19643273-chr19:19664895..19665828,4	K562	blood:
2	chr19:19429347..19431568-chr19:19636736..19638979,2	K562	blood:
3	chr19:19651192..19652936-chr19:19774066..19776214,2	MCF-7	breast:
4	chr19:19645771..19647480-chr19:19752306..19754709,2	MCF-7	breast:
5	chr19:19647870..19650487-chr19:19773815..19776020,2	MCF-7	breast:
6	chr19:19642851..19643645-chr19:19754387..19755092,2	MCF-7	breast:
7	chr19:19630109..19632757-chr19:19650761..19652329,2	MCF-7	breast:
8	chr19:19431326..19434090-chr19:19651434..19653911,2	K562	blood:
9	chr19:19637478..19643205-chr19:19752988..19755970,5	MCF-7	breast:
10	chr19:19642697..19643765-chr19:19754263..19755262,15	MCF-7	breast:
11	chr19:19644634..19646654-chr19:19773130..19774815,2	K562	blood:
12	chr19:19625980..19628021-chr19:19638084..19640231,2	K562	blood:
13	chr19:19654766..19656618-chr19:19752762..19755069,2	MCF-7	breast:
14	chr19:19643085..19643694-chr19:19663023..19664019,2	MCF-7	breast:
15	chr19:19634659..19637641-chr19:19737482..19739194,2	MCF-7	breast:
16	chr19:19630106..19632740-chr19:19655430..19658007,2	K562	blood:
17	chr19:19649600..19655493-chr19:19770960..19774805,7	K562	blood:
18	chr19:19628992..19634294-chr19:19634431..19640068,9	K562	blood:
19	chr19:19641380..19649124-chr19:19737025..19742358,12	MCF-7	breast:
20	chr19:19625442..19631834-chr19:19631841..19636968,12	K562	blood:
21	chr19:19626895..19628424-chr19:19637560..19639397,2	MCF-7	breast:
22	chr19:19649331..19652417-chr19:19771491..19776120,6	K562	blood:
23	chr19:19624801..19628442-chr19:19640614..19645032,4	MCF-7	breast:
24	chr19:19630106..19632740-chr19:19655430..19658007,2	K562	blood:
25	chr19:19625745..19628806-chr19:19639215..19643547,5	K562	blood:
26	chr19:19649879..19653588-chr19:19753029..19755939,4	K562	blood:
27	chr19:19643088..19644986-chr19:19645378..19647778,2	MCF-7	breast:
28	chr19:19640933..19643322-chr19:19754453..19756328,2	K562	blood:
29	chr19:19649974..19652165-chr19:19739340..19740963,2	MCF-7	breast:
30	chr19:19653642..19665886-chr19:19736282..19742268,24	MCF-7	breast:
31	chr19:19650831..19653075-chr19:20010995..20012617,3	K562	blood:
32	chr19:19652335..19654286-chr19:19738198..19739867,2	MCF-7	breast:
33	chr19:19626407..19628421-chr19:19634732..19637865,3	MCF-7	breast:
34	chr19:19642918..19643611-chr19:19753841..19754451,2	MCF-7	breast:
35	chr19:19655485..19657839-chr19:19672658..19674603,2	K562	blood:
36	chr19:19642455..19644774-chr19:19648447..19650007,2	MCF-7	breast:
37	chr19:19653467..19655558-chr19:19772765..19774360,2	MCF-7	breast:
38	chr19:19647280..19649688-chr19:19752870..19754432,2	MCF-7	breast:
39	chr19:19643088..19644986-chr19:19645378..19647778,2	MCF-7	breast:
40	chr19:19625369..19628375-chr19:19648780..19652325,4	MCF-7	breast:
41	chr19:19642732..19643639-chr19:19754351..19755223,5	K562	blood:
42	chr19:19625365..19628497-chr19:19651436..19653967,3	K562	blood:
43	chr19:19642718..19643690-chr19:19664655..19665564,3	MCF-7	breast:
44	chr19:19643099..19644624-chr19:19737632..19740411,2	MCF-7	breast:
45	chr19:19645021..19645617-chr19:19754356..19754857,2	K562	blood:
46	chr19:19650697..19653588-chr19:19753029..19754860,3	K562	blood:
47	chr19:19640161..19645536-chr19:19752406..19756434,6	K562	blood:
48	chr19:19625665..19627306-chr19:19648287..19650892,2	K562	blood:
49	chr19:19636166..19641062-chr19:19772143..19775843,4	MCF-7	breast:
50	chr19:19652327..19654273-chr19:19657825..19660642,2	MCF-7	breast:

(count:1 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-CILP2-2	chr19:19635527-19635761	expReg_chr19_4273_+

No data

Variant related genes	Relation type
TSSK6	TF binding region
CILP2	TF binding region
YJEFN3	TF binding region
TSSK6	CpG island
CILP2	CpG island
YJEFN3	CpG island
ENSG00000105717	chromatin interactions
ENSG00000105726	chromatin interactions
ENSG00000064547	chromatin interactions
ENSG00000105705	chromatin interactions
ENSG00000186010	chromatin interactions
ENSG00000258674	chromatin interactions
ENSG00000178093	chromatin interactions
ENSG00000184635	chromatin interactions
ENSG00000129933	chromatin interactions
ENSG00000250067	chromatin interactions
ENSG00000089639	chromatin interactions
ENSG00000160161	chromatin interactions
ENSG00000267268	chromatin interactions

Extended variants
information (count: 1109 )
Associated
traits (count: 59 )

Variant overlapped rSNPs/rCNVs (count:1109 , 50 per page) page: 1 2 3 4 5 6 7 ... 23

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs4808965	chr19:19631655-19631656	Weak transcription Strong transcription Enhancers Genic enhancers ZNF genes & repeats	TF binding region Chromatin interactive region	6 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs528939812	chr19:19631697-19631698	Weak transcription Strong transcription Enhancers Genic enhancers ZNF genes & repeats	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
3	rs548965228	chr19:19631716-19631717	Weak transcription Strong transcription Enhancers Genic enhancers ZNF genes & repeats	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
4	rs369821117	chr19:19631736-19631737	Weak transcription Strong transcription Enhancers Genic enhancers ZNF genes & repeats	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
5	rs531515501	chr19:19631750-19631751	Weak transcription Strong transcription Enhancers Genic enhancers ZNF genes & repeats	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
6	rs200615039	chr19:19631779-19631780	Weak transcription Strong transcription Enhancers Genic enhancers ZNF genes & repeats	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
7	rs551293556	chr19:19631805-19631806	Weak transcription Strong transcription Enhancers Genic enhancers	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
8	rs372286441	chr19:19631849-19631850	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
9	rs188628589	chr19:19631883-19631884	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
10	rs377051306	chr19:19631934-19631935	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
11	rs370089768	chr19:19631951-19631952	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
12	rs566967324	chr19:19631963-19631964	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
13	rs189262271	chr19:19631989-19631990	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
14	rs555820522	chr19:19632002-19632003	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
15	rs184253211	chr19:19632043-19632044	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
16	rs538228066	chr19:19632072-19632073	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
17	rs558517630	chr19:19632081-19632082	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
18	rs117033706	chr19:19632118-19632119	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
19	rs149687782	chr19:19632139-19632140	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
20	rs540830960	chr19:19632183-19632184	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
21	rs554025672	chr19:19632239-19632240	Weak transcription ZNF genes & repeats Strong transcription Genic enhancers Enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
22	rs147879986	chr19:19632250-19632251	Weak transcription ZNF genes & repeats Strong transcription Genic enhancers Enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
23	rs542279300	chr19:19632273-19632274	Weak transcription ZNF genes & repeats Strong transcription Genic enhancers Enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
24	rs7508485	chr19:19632293-19632294	Weak transcription ZNF genes & repeats Strong transcription Genic enhancers Enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
25	rs563954188	chr19:19632306-19632307	Weak transcription ZNF genes & repeats Strong transcription Genic enhancers Enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
26	rs572138017	chr19:19632330-19632331	Weak transcription ZNF genes & repeats Strong transcription Genic enhancers Enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
27	rs531231597	chr19:19632353-19632354	Weak transcription ZNF genes & repeats Strong transcription Genic enhancers Enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
28	rs11669010	chr19:19632378-19632379	Weak transcription ZNF genes & repeats Strong transcription Genic enhancers Enhancers	Chromatin interactive region	6 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
29	rs7508514	chr19:19632416-19632417	Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
30	rs564880177	chr19:19632417-19632418	Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
31	rs187144543	chr19:19632444-19632445	Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
32	rs368887750	chr19:19632454-19632455	Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
33	rs191636253	chr19:19632455-19632456	Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
34	rs202051658	chr19:19632472-19632473	Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
35	rs549535237	chr19:19632474-19632475	Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
36	rs560976997	chr19:19632498-19632499	Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
37	rs569352647	chr19:19632537-19632538	Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
38	rs9749531	chr19:19632553-19632554	Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
39	rs376412286	chr19:19632643-19632644	Weak transcription Strong transcription	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
40	rs571911066	chr19:19632653-19632654	Weak transcription Strong transcription	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
41	rs534197841	chr19:19632657-19632658	Weak transcription Strong transcription	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
42	rs138978159	chr19:19632658-19632659	Weak transcription Strong transcription	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
43	rs574185490	chr19:19632668-19632669	Weak transcription Strong transcription	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
44	rs574400243	chr19:19632674-19632675	Weak transcription Strong transcription	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
45	rs542788592	chr19:19632690-19632691	Weak transcription Strong transcription	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
46	rs555885078	chr19:19632691-19632692	Weak transcription Strong transcription	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
47	rs149294832	chr19:19632703-19632704	Weak transcription Strong transcription	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
48	rs117509636	chr19:19632707-19632708	Weak transcription Strong transcription	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
49	rs143568893	chr19:19632731-19632732	Weak transcription Strong transcription	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
50	rs527607487	chr19:19632751-19632752	Weak transcription Strong transcription	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:59)

Disease	PMID	Source
Follicular lymphoma	20505157	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Non-syndromic sensorineural hearing loss	20179077	CNVD
Melanoma	18172304	CNVD
Glioblastoma multiforme	21080181	CNVD
Metanephric adenoma	20802469	CNVD
Prostate cancer	16573809	CNVD
Breast cancer	16608533	CNVD
Lung cancer	17297452	CNVD
Salivary gland adenoid cystic carcinoma	17545515	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Medulloblastoma	16783165	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Chordoma	18071362	CNVD
Ewing''s sarcoma	21437220	CNVD
Medulloblastoma	21979893	CNVD
Oligodendroglial tumors	17285580	CNVD
Oral cancer	21386901	CNVD
ovarian endometriomas	16273235	CNVD
Endometrial cancer	22040021	CNVD
Acute myeloid leukemia	16864856	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	17387387	CNVD
Cervical cancer	21063398	CNVD
Myelodysplastic syndrome	17634407	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Retinoblastoma	21504564	CNVD
Ovarian cancer	21720365	CNVD
Urothelial carcinoma	21177765	CNVD
Cancer	20164919	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Basal cell lymphoma	21115979	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Medullary thyroid carcinoma	18765511	CNVD
Prostate cancer	18632612	CNVD
Autism	22495311	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
small cell lung cancer	20016488	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Breast cancer	21364760	CNVD
Mycobacterial infection	18421352	CNVD
Glioblastoma multiforme	22286061	CNVD
Acute monocytic leukemia	16498392	CNVD
Lung cancer	18438408	CNVD
Barrett''s adenocarcinoma	18663352	CNVD
Liver carcinoma	19366792	CNVD
Colorectal cancer	19455253	CNVD
Lujan-Fryns syndrom	21521776	CNVD
Breast cancer	20409316	CNVD
Cancer	17160897	CNVD
Cancer	17440070	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Breast cancer	21509527	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD

Chromatin state (count:1512 , 50 per page) page: 1 2 3 4 5 6 7 ... 31

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:19627600-19636200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr19:19628000-19634800	Weak transcription	Fetal Kidney	kidney
3	chr19:19628000-19635000	Weak transcription	Primary neutrophils fromperipheralblood	blood
4	chr19:19628000-19636000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
5	chr19:19628000-19638000	Weak transcription	Fetal Lung	lung
6	chr19:19628000-19640800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
7	chr19:19628200-19636200	Weak transcription	Fetal Heart	heart
8	chr19:19628200-19636200	Weak transcription	Right Atrium	heart
9	chr19:19628200-19642800	Weak transcription	Stomach Mucosa	stomach
10	chr19:19628200-19643000	Weak transcription	HUVEC	blood vessel
11	chr19:19628400-19632000	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
12	chr19:19628400-19632200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
13	chr19:19628400-19632400	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
14	chr19:19628400-19634800	Weak transcription	Primary T helper naive cells from peripheral blood	blood
15	chr19:19628400-19639200	Weak transcription	Psoas Muscle	Psoas
16	chr19:19628400-19640800	Weak transcription	HMEC	breast
17	chr19:19628400-19642800	Weak transcription	Hela-S3	cervix
18	chr19:19628600-19633000	Strong transcription	Fetal Stomach	stomach
19	chr19:19628600-19635800	Weak transcription	Rectal Smooth Muscle	rectum
20	chr19:19628600-19636400	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
21	chr19:19628800-19632200	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
22	chr19:19629000-19632400	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
23	chr19:19629000-19632800	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
24	chr19:19629000-19636800	Weak transcription	Colon Smooth Muscle	Colon
25	chr19:19629000-19637200	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
26	chr19:19629000-19638600	Weak transcription	HepG2	liver
27	chr19:19629000-19643600	Weak transcription	Small Intestine	intestine
28	chr19:19629200-19632000	Strong transcription	Cortex derived primary cultured neurospheres	brain
29	chr19:19629200-19632800	Strong transcription	Fetal Intestine Small	intestine
30	chr19:19629800-19631800	Strong transcription	Fetal Thymus	thymus
31	chr19:19629800-19632000	Strong transcription	H1 Cell Line	embryonic stem cell
32	chr19:19629800-19632200	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
33	chr19:19629800-19632400	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
34	chr19:19630000-19631800	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
35	chr19:19630000-19631800	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
36	chr19:19630000-19631800	Strong transcription	Fetal Intestine Large	intestine
37	chr19:19630000-19632000	Strong transcription	HUES48 Cell Line	embryonic stem cell
38	chr19:19630000-19632000	Strong transcription	HUES6 Cell Line	embryonic stem cell
39	chr19:19630000-19632000	Strong transcription	HUES64 Cell Line	embryonic stem cell
40	chr19:19630000-19632000	Strong transcription	Primary monocytes fromperipheralblood	blood
41	chr19:19630000-19632000	Strong transcription	Primary T cells from cord blood	blood
42	chr19:19630000-19632000	Strong transcription	Adipose Nuclei	Adipose
43	chr19:19630000-19632000	Strong transcription	Liver	Liver
44	chr19:19630000-19632000	Strong transcription	Rectal Mucosa Donor 29	rectum
45	chr19:19630000-19632000	Strong transcription	K562	blood
46	chr19:19630000-19632000	Strong transcription	Monocytes-CD14+_RO01746	blood
47	chr19:19630000-19632000	Strong transcription	Osteobl	bone
48	chr19:19630000-19632200	Strong transcription	iPS-20b Cell Line	embryonic stem cell
49	chr19:19630000-19632200	Strong transcription	Primary B cells from peripheral blood	blood
50	chr19:19630000-19632400	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung

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