Variant report

Variant	nsv917353
Chromosome Location	chrX:138912620-139283492
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:3522)
CpG islands
(count:1775)
Chromatin interactive
region (count:103)
LncRNA
region (count:12)
Mature miRNA
region (count: 2)
miRNA target
sites (count:0)

(count:3522 , 50 per page) page: 1 2 3 4 5 6 7 ... 71

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chrX:139048733-139048959	K562	blood:	n/a	n/a
2	ARID3A	chrX:139133080-139133404	HepG2	liver:	n/a	n/a
3	ARID3A	chrX:139002568-139003021	K562	blood:	n/a	n/a
4	ARID3A	chrX:139015623-139015830	K562	blood:	n/a	n/a
5	ARID3A	chrX:138959979-138960442	K562	blood:	n/a	n/a
6	ARID3A	chrX:139013394-139013604	HepG2	liver:	n/a	n/a
7	ARID3A	chrX:139223645-139223960	HepG2	liver:	n/a	n/a
8	ARID3A	chrX:139039980-139040381	HepG2	liver:	n/a	n/a
9	ARID3A	chrX:138973152-138973859	K562	blood:	n/a	n/a
10	ARID3A	chrX:139012775-139013271	K562	blood:	n/a	n/a
11	ARID3A	chrX:139006990-139007242	HepG2	liver:	n/a	n/a
12	ARID3A	chrX:139117260-139117398	K562	blood:	n/a	n/a
13	ATF1	chrX:138917072-138917258	K562	blood:	n/a	n/a
14	ATF1	chrX:138973487-138973884	K562	blood:	n/a	n/a
15	ATF3	chrX:139026564-139026813	K562	blood:	n/a	n/a
16	ATF3	chrX:138973454-138973829	K562	blood:	n/a	n/a
17	BACH1	chrX:139013237-139013318	H1-hESC	embryonic stem cell:	n/a	n/a
18	BACH1	chrX:139015363-139015476	H1-hESC	embryonic stem cell:	n/a	n/a
19	BACH1	chrX:139173641-139173725	H1-hESC	embryonic stem cell:	n/a	n/a
20	BACH1	chrX:139014004-139014182	H1-hESC	embryonic stem cell:	n/a	n/a
21	BACH1	chrX:138959727-138960513	K562	blood:	n/a	n/a
22	BATF	chrX:138939514-138939680	GM12878	blood:	n/a	chrX:138939610-138939621
23	BATF	chrX:138991924-138992186	GM12878	blood:	n/a	chrX:138992047-138992055
24	BATF	chrX:138974701-138974966	GM12878	blood:	n/a	n/a
25	BATF	chrX:139012613-139012895	GM12878	blood:	n/a	n/a
26	BATF	chrX:138974706-138975093	GM12878	blood:	n/a	n/a
27	BATF	chrX:138939525-138939696	GM12878	blood:	n/a	chrX:138939610-138939621
28	BATF	chrX:138991929-138992221	GM12878	blood:	n/a	chrX:138992047-138992055
29	BCL11A	chrX:139001197-139001377	GM12878	blood:	n/a	n/a
30	BCLAF1	chrX:139014871-139015227	GM12878	blood:	n/a	n/a
31	BHLHE40	chrX:139139157-139139417	K562	blood:	n/a	n/a
32	BHLHE40	chrX:139015014-139015440	GM12878	blood:	n/a	n/a
33	BHLHE40	chrX:138991933-138992236	GM12878	blood:	n/a	n/a
34	BHLHE40	chrX:139139203-139139436	GM12878	blood:	n/a	n/a
35	BHLHE40	chrX:139173310-139173333	K562	blood:	n/a	n/a
36	BHLHE40	chrX:139223644-139224060	GM12878	blood:	n/a	n/a
37	BHLHE40	chrX:139031912-139032223	K562	blood:	n/a	chrX:139032084-139032093 chrX:139032084-139032093 chrX:139032078-139032099 chrX:139032085-139032094
38	BHLHE40	chrX:139170073-139170328	GM12878	blood:	n/a	n/a
39	BHLHE40	chrX:139223682-139224032	K562	blood:	n/a	n/a
40	BHLHE40	chrX:138959733-138960390	K562	blood:	n/a	n/a
41	BHLHE40	chrX:139012582-139012846	GM12878	blood:	n/a	n/a
42	BHLHE40	chrX:139013392-139013522	GM12878	blood:	n/a	n/a
43	BHLHE40	chrX:138979974-138980038	GM12878	blood:	n/a	n/a
44	BHLHE40	chrX:139013415-139013752	K562	blood:	n/a	n/a
45	BHLHE40	chrX:139014022-139014564	GM12878	blood:	n/a	chrX:139014481-139014497
46	BHLHE40	chrX:139013983-139015969	K562	blood:	n/a	chrX:139014481-139014497
47	BHLHE40	chrX:138980321-138980327	GM12878	blood:	n/a	n/a
48	BRCA1	chrX:139015405-139015599	H1-hESC	embryonic stem cell:	n/a	n/a
49	BRCA1	chrX:139015279-139015665	Hela-S3	cervix:	n/a	n/a
50	CBX3	chrX:138973525-138973857	K562	blood:	n/a	n/a

(count:1775 , 50 per page) page: 1 2 3 4 5 6 7 ... 36

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chrX:138915416-138915466	IMR90	lung:	fetal
2	chrX:139010040-139010090	NB4	blood:	n/a
3	chrX:139007085-139007135	SK-N-SH_RA	brain:	n/a
4	chrX:139006615-139006665	CMK	blood:	n/a
5	chrX:139006339-139006389	HNPCEpiC	eye:	n/a
6	chrX:139007085-139007135	HepG2	liver:	n/a
7	chrX:138915416-138915466	IMR90	lung:	fetal
8	chrX:139010040-139010090	NB4	blood:	n/a
9	chrX:139007085-139007135	SK-N-SH_RA	brain:	n/a
10	chrX:139006615-139006665	CMK	blood:	n/a
11	chrX:139006339-139006389	HNPCEpiC	eye:	n/a
12	chrX:139007085-139007135	HepG2	liver:	n/a
13	chrX:139007130-139007180	HCT-116	colon:	n/a
14	chrX:139010040-139010090	HCT-116	colon:	n/a
15	chrX:139173584-139173634	PANC-1	pancreas:	n/a
16	chrX:138914571-138914621	Hela-S3	cervix:	n/a
17	chrX:138913929-138913979	MCF-7	breast:	n/a
18	chrX:138913929-138913979	HPAEpiC	pulmonary alveolar:	n/a
19	chrX:139014368-139014418	T-47D	breast:	n/a
20	chrX:139013957-139014007	BJ	skin:	n/a
21	chrX:139010040-139010090	HRPEpiC	eye:	n/a
22	chrX:139010040-139010090	ovcar-3	ovarian:	n/a
23	chrX:139007130-139007180	HepG2	liver:	n/a
24	chrX:139173266-139173316	HNPCEpiC	eye:	n/a
25	chrX:138915704-138915754	GM12878	blood:	n/a
26	chrX:139015212-139015262	AoSMC	blood vessel:	n/a
27	chrX:139006401-139006451	IMR90	lung:	fetal
28	chrX:139014368-139014418	HCPEpiC	choroid plexus:	n/a
29	chrX:139012736-139012786	NHDF-neo	bronchial:	n/a
30	chrX:139177299-139177349	SK-N-SH_RA	brain:	n/a
31	chrX:139006401-139006451	GM12892	blood:	n/a
32	chrX:139173571-139173621	HCM	heart:	n/a
33	chrX:139013957-139014007	RPTEC	kidney:	n/a
34	chrX:139014460-139014510	GM12878	blood:	n/a
35	chrX:139040942-139040992	HPAEpiC	pulmonary alveolar:	n/a
36	chrX:139006615-139006665	Caco-2	colon:	n/a
37	chrX:139006339-139006389	MCF10A-Er-Src	breast:	n/a
38	chrX:139173266-139173316	HCPEpiC	choroid plexus:	n/a
39	chrX:139013957-139014007	AG04449	skin:	fetal
40	chrX:139015490-139015540	HPAEpiC	pulmonary alveolar:	n/a
41	chrX:139012736-139012786	IMR90	lung:	fetal
42	chrX:138915416-138915466	HNPCEpiC	eye:	n/a
43	chrX:139040942-139040992	GM12878	blood:	n/a
44	chrX:139014460-139014510	LNCaP	prostate:	n/a
45	chrX:138913929-138913979	HMEC	breast:	n/a
46	chrX:139015886-139015936	AG04449	skin:	fetal
47	chrX:139173965-139174015	AG04449	skin:	fetal
48	chrX:139007085-139007135	HAEpiC	amniotic membrane:	n/a
49	chrX:138915416-138915466	HCF	heart:	n/a
50	chrX:139015804-139015854	ovcar-3	ovarian:	n/a

(count:103 , 50 per page) page: 1 2 3

No.	Distal block	Cell Line	Cell type
1	chrX:138978998..138981767-chrX:138997584..138999088,2	K562	blood:
2	chrX:139003030..139006775-chrX:139014135..139016470,3	MCF-7	breast:
3	chrX:138922950..138925590-chrX:138942745..138945382,2	K562	blood:
4	chrX:139144939..139147378-chrX:139175108..139177424,2	MCF-7	breast:
5	chrX:139012968..139015959-chrX:139025319..139027356,3	K562	blood:
6	chrX:139054827..139056576-chrX:139057260..139058894,2	MCF-7	breast:
7	chrX:139138705..139139883-chrX:139223345..139224497,8	MCF-7	breast:
8	chrX:138984585..138987395-chrX:138988668..138990318,2	K562	blood:
9	chrX:138978998..138981767-chrX:138997584..138999088,2	K562	blood:
10	chrX:139241400..139244039-chrX:139245639..139247247,2	K562	blood:
11	chrX:139231730..139232543-chrX:139743748..139744428,2	MCF-7	breast:
12	chrX:139012765..139014914-chrX:139031974..139034930,2	K562	blood:
13	chrX:139228851..139231693-chrX:139591755..139593420,2	MCF-7	breast:
14	chrX:138907383..138910299-chrX:138911001..138913816,2	K562	blood:
15	chrX:138983444..138984990-chrX:139014335..139016296,2	K562	blood:
16	chrX:139230010..139231523-chrX:139589548..139591340,2	MCF-7	breast:
17	chrX:138909179..138912021-chrX:139015740..139017279,2	K562	blood:
18	chrX:138964413..138967616-chrX:138972047..138974304,3	K562	blood:
19	chrX:138985114..138987559-chrX:139013389..139015006,2	K562	blood:
20	chrX:139061205..139062836-chrX:139067209..139069038,2	K562	blood:
21	chrX:138993872..138997950-chrX:139012561..139016824,4	K562	blood:
22	chrX:139012765..139014914-chrX:139031974..139034930,2	K562	blood:
23	chrX:138972307..138974912-chrX:138975339..138977928,3	K562	blood:
24	chrX:138960204..138962470-chrX:138986792..138989321,2	K562	blood:
25	chrX:138958237..138961195-chrX:138963345..138965697,2	K562	blood:
26	chrX:139138840..139139719-chrX:139815635..139816565,3	K562	blood:
27	chrX:139138818..139139829-chrX:139589920..139590530,4	MCF-7	breast:
28	chrX:139205617..139206261-chrX:139589597..139590557,2	MCF-7	breast:
29	chr11:122932486..122933259-chrX:139015343..139016082,2	NB4	blood:
30	chr18:38090682..38091556-chrX:139031586..139032086,2	K562	blood:
31	chrX:139061205..139062836-chrX:139067209..139069038,2	K562	blood:
32	chrX:139031593..139032380-chrX:139048043..139048750,2	MCF-7	breast:
33	chrX:138987470..138989907-chrX:138990067..138991903,2	K562	blood:
34	chrX:138899808..138901670-chrX:138942595..138944133,2	K562	blood:
35	chrX:138984585..138987395-chrX:138988668..138990318,2	K562	blood:
36	chrX:138975019..138977238-chrX:138977261..138979909,2	K562	blood:
37	chrX:138964413..138967616-chrX:138972047..138974304,3	K562	blood:
38	chrX:138963273..138965824-chrX:139016270..139017818,2	K562	blood:
39	chrX:138972307..138974912-chrX:138975339..138977928,3	K562	blood:
40	chrX:138906465..138908031-chrX:139012823..139014377,2	MCF-7	breast:
41	chrX:138963632..138966605-chrX:139014337..139016021,2	K562	blood:
42	chr17:4853164..4854128-chrX:139015400..139015911,2	Hela-S3	cervix:
43	chrX:138960408..138962887-chrX:138969106..138970786,2	K562	blood:
44	chrX:139011779..139014233-chrX:139015121..139017109,2	MCF-7	breast:
45	chrX:139006431..139009320-chrX:139009614..139012106,2	MCF-7	breast:
46	chrX:138898042..138899738-chrX:138910975..138912939,2	K562	blood:
47	chrX:138985114..138987559-chrX:139013389..139015006,2	K562	blood:
48	chr16:81737296..81737796-chrX:139014881..139015641,2	NB4	blood:
49	chrX:138956213..138958123-chrX:139012738..139014426,2	MCF-7	breast:
50	chrX:138965466..138967928-chrX:138971445..138973731,2	MCF-7	breast:

(count:12 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-CXorf66-3	chrX:139126433-139126622	NONHSAT138790
2	lnc-F9-1	chrX:139099805-139100196	ENSG00000233145
3	lnc-CXorf66-4	chrX:138928819-138928877	NONHSAT138781
4	lnc-F9-1	chrX:139099426-139099616	NONHSAT138788
5	lnc-F9-5	chrX:139168014-139168307	NONHSAT138791
6	lnc-F9-3	chrX:138998154-138998448	uc_482_+
7	lnc-F9-1	chrX:139099805-139100323	NONHSAT138788
8	lnc-CXorf66-4	chrX:138928883-138929341	NONHSAT138781
9	lnc-F9-4	chrX:139115445-139115665	NONHSAT138789
10	lnc-CXorf66-2	chrX:138998154-138998448	uc_482_-
11	lnc-CXorf66-3	chrX:139125853-139126244	NONHSAT138790
12	lnc-F9-1	chrX:139099427-139099616	ENSG00000233145

miRNA name	Chromosome Location	mirBase accession
hsa-miR-505-3p	chrX:139006319-139006340	MIMAT0002876
hsa-miR-505-5p	chrX:139006355-139006376	MIMAT0004776

No data

Variant related genes	Relation type
ENSG00000233145	TF binding region
ENSG00000230707	TF binding region
CXorf66	TF binding region
HNRNPA3P3	TF binding region
ATP11C	TF binding region
MIR505	TF binding region
RN7SL727P	TF binding region
RNU6ATAC23P	TF binding region
ENSG00000252719	TF binding region
ENSG00000233145	CpG island
ENSG00000230707	CpG island
CXorf66	CpG island
HNRNPA3P3	CpG island
ATP11C	CpG island
MIR505	CpG island
RN7SL727P	CpG island
RNU6ATAC23P	CpG island
ENSG00000252719	CpG island
ENSG00000108515	chromatin interactions
ENSG00000089157	chromatin interactions
ENSG00000207633	chromatin interactions
ENSG00000101977	chromatin interactions
ENSG00000105176	chromatin interactions
ENSG00000153815	chromatin interactions
ENSG00000109971	chromatin interactions
ENSG00000221375	chromatin interactions
ENSG00000101974	chromatin interactions
C5orf22	Mature miRNA region
OSBP	Mature miRNA region
PPP1CB	Mature miRNA region
UBE2O	Mature miRNA region
RPL9	Mature miRNA region
HMGN4	Mature miRNA region
ZNF511	Mature miRNA region
TRIM28	Mature miRNA region
CWC25	Mature miRNA region
GPLD1	Mature miRNA region
KDM4A	Mature miRNA region
FNBP1L	Mature miRNA region
EIF4E	Mature miRNA region
TMEM185A	Mature miRNA region
NDRG1	Mature miRNA region
PRKCI	Mature miRNA region
MAP7D2	Mature miRNA region
DROSHA	Mature miRNA region
TMOD3	Mature miRNA region
ASB1	Mature miRNA region
ELF4	Mature miRNA region
THOP1	Mature miRNA region
TP53RK	Mature miRNA region
BAZ1B	Mature miRNA region
TXNDC5	Mature miRNA region
GATAD2B	Mature miRNA region
FKBP1A	Mature miRNA region
RPS15	Mature miRNA region
SIAH1	Mature miRNA region
MORF4L2	Mature miRNA region
RUNX2	Mature miRNA region
DDX3X	Mature miRNA region
TAF9	Mature miRNA region
PRR14L	Mature miRNA region
PJA2	Mature miRNA region
MARS	Mature miRNA region
ORC2	Mature miRNA region
EBNA1BP2	Mature miRNA region
PAICS	Mature miRNA region
ATN1	Mature miRNA region
SRSF1	Mature miRNA region
PPP1R13B	Mature miRNA region
HSPA1B	Mature miRNA region
HIST4H4	Mature miRNA region
PDE4DIP	Mature miRNA region
MYO19	Mature miRNA region
MYBL2	Mature miRNA region
FANCI	Mature miRNA region
DHX9	Mature miRNA region
CTSZ	Mature miRNA region
MKI67	Mature miRNA region
SERBP1	Mature miRNA region
CAD	Mature miRNA region
RUFY3	Mature miRNA region
NDUFB8	Mature miRNA region
TUBB	Mature miRNA region
LIMS1	Mature miRNA region
MDC1	Mature miRNA region
DDX6	Mature miRNA region
MTA2	Mature miRNA region
CCT7	Mature miRNA region
RMDN3	Mature miRNA region
FAM83G	Mature miRNA region
RPLP0	Mature miRNA region
STAMBP	Mature miRNA region
NONO	Mature miRNA region
XRCC6	Mature miRNA region
DIP2C	Mature miRNA region
RPL10	Mature miRNA region
CDC5L	Mature miRNA region
CD47	Mature miRNA region
FIS1	Mature miRNA region
C15orf39	Mature miRNA region
EEF1A1	Mature miRNA region
OTUD5	Mature miRNA region
YTHDC2	Mature miRNA region
PRC1	Mature miRNA region
PRRC2B	Mature miRNA region
ANKRD13B	Mature miRNA region
FBXO33	Mature miRNA region
SEC13	Mature miRNA region
RPLP2	Mature miRNA region
TP53BP1	Mature miRNA region
MYH10	Mature miRNA region
ALYREF	Mature miRNA region
KDM4B	Mature miRNA region
SET	Mature miRNA region
NABP2	Mature miRNA region
HNRNPF	Mature miRNA region
KXD1	Mature miRNA region
RPL11	Mature miRNA region
HNRNPA3	Mature miRNA region
OGFR	Mature miRNA region
THADA	Mature miRNA region
SATB2	Mature miRNA region
DNAJB9	Mature miRNA region
EPHA4	Mature miRNA region
SRRM2	Mature miRNA region
BTAF1	Mature miRNA region
CSPP1	Mature miRNA region
HNRNPC	Mature miRNA region
TLE3	Mature miRNA region
ATP5J2-PTCD1	Mature miRNA region
PUS7	Mature miRNA region
LONP2	Mature miRNA region
PRKCA	Mature miRNA region
MIS18A	Mature miRNA region
GIGYF2	Mature miRNA region
ZBTB9	Mature miRNA region
NUCKS1	Mature miRNA region
RRP1B	Mature miRNA region
CSF1	Mature miRNA region
PPP1R8	Mature miRNA region
SNAP29	Mature miRNA region
ANKRD13D	Mature miRNA region
BRD2	Mature miRNA region
UTRN	Mature miRNA region
CDKN1A	Mature miRNA region
CHMP7	Mature miRNA region
ENC1	Mature miRNA region
TPD52	Mature miRNA region
PPP2R1A	Mature miRNA region
WIPI2	Mature miRNA region
CERS1	Mature miRNA region
TUBB3	Mature miRNA region
DDX24	Mature miRNA region
TUBA1B	Mature miRNA region
LASP1	Mature miRNA region
FANCD2	Mature miRNA region
TPBG	Mature miRNA region
MAP1S	Mature miRNA region
LZTR1	Mature miRNA region

Extended variants
information (count: 2963 )
Associated
traits (count: 45 )

Variant overlapped rSNPs/rCNVs (count:2963 , 50 per page) page: 1 2 3 4 5 6 7 ... 60

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs190387564	chrX:138912651-138912652	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs141608974	chrX:138912666-138912667	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs191756162	chrX:138912861-138912862	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs184343453	chrX:138913014-138913015	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs368817503	chrX:138913080-138913081	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs373582734	chrX:138913162-138913163	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs188693281	chrX:138913389-138913390	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs113684789	chrX:138913408-138913409	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs567811605	chrX:138913440-138913441	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs111615650	chrX:138913511-138913512	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs6654376	chrX:138913528-138913529	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
12	rs180706335	chrX:138913695-138913696	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
13	rs376424504	chrX:138913933-138913934	Enhancers Weak transcription Flanking Active TSS Active TSS	n/a	n/a	Overlapped CNVs	n/a
14	rs185377482	chrX:138913949-138913950	Enhancers Weak transcription Flanking Active TSS Active TSS	n/a	n/a	Overlapped CNVs	n/a
15	rs533582238	chrX:138914099-138914100	Enhancers Weak transcription Flanking Active TSS Active TSS	n/a	n/a	Overlapped CNVs	n/a
16	rs372491365	chrX:138914301-138914302	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
17	rs375463421	chrX:138914303-138914304	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
18	rs370095982	chrX:138914365-138914366	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
19	rs367850524	chrX:138914749-138914750	Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
20	rs59964406	chrX:138914818-138914819	Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
21	rs113036712	chrX:138915014-138915015	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
22	rs59912163	chrX:138915045-138915046	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
23	rs190275741	chrX:138915149-138915150	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
24	rs148368867	chrX:138915393-138915394	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
25	rs141529104	chrX:138915475-138915476	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
26	rs28741013	chrX:138915549-138915550	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs530882121	chrX:138915690-138915691	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs5954743	chrX:138915976-138915977	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
29	rs182523635	chrX:138916153-138916154	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs113897505	chrX:138916264-138916265	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs539339117	chrX:138916423-138916424	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs141632263	chrX:138916465-138916466	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs2491006	chrX:138916495-138916496	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
34	rs186713434	chrX:138916713-138916714	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs139078780	chrX:138916750-138916751	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs192068688	chrX:138917229-138917230	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
37	rs182892198	chrX:138917287-138917288	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
38	rs567212911	chrX:138917306-138917307	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
39	rs7879426	chrX:138917383-138917384	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
40	rs145116258	chrX:138917440-138917441	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs35887038	chrX:138917477-138917478	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs148681957	chrX:138917481-138917482	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs185298392	chrX:138917593-138917594	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs35166210	chrX:138917702-138917703	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs375923053	chrX:138917765-138917766	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs142172458	chrX:138917873-138917874	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs151183896	chrX:138917899-138917900	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs377291968	chrX:138917954-138917955	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs370553820	chrX:138918079-138918080	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs561410971	chrX:138918111-138918112	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:45)

Disease	PMID	Source
Neuroblastoma	18923191	CNVD
Burkitt''s lymphoma	20823134	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	21080181	CNVD
Astrocytoma	17387387	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Metanephric adenoma	20802469	CNVD
Medulloblastoma	21979893	CNVD
Schizophrenia	23904455	CNVD
Olfactory neuroblastoma	18408657	CNVD
infertile	22614455	CNVD
Cancer	20581869	CNVD
Multiple myeloma	20724749	CNVD
Non-syndromic sensorineural hearing loss	18496225	CNVD
Prostate cancer	18632612	CNVD
Lung cancer	18438408	CNVD
Autism	22495311	CNVD
lymphocytic leukemia	21291569	CNVD
Testicular germ cell tumor	18059402	CNVD
Testicular cancer	18059402	CNVD
Seminomas	18059402	CNVD
Glioblastoma multiforme	19960244	CNVD
Endometrial cancer	22040021	CNVD
Burkitt''s lymphoma	18698080	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	17387387	CNVD
Cancer	16751803	CNVD
small cell lung cancer	20016488	CNVD
Congenital Hypertrichosis Syndrome	21636067	CNVD
Congenital abnormalities	21549014	CNVD
Developmental delay	21549014	CNVD
Mental retardation	21549014	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Breast cancer	17603634	CNVD
abnormal development	18461090	CNVD
Multiple myeloma	17550852	CNVD
Premature ovarian failure	20952765	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
Breast cancer	21364760	CNVD
Hereditary coagulopathy	21993689	CNVD
Cerebellar atrophy	21569638	CNVD
Fragile x	21569638	CNVD
Abnormal corpus callosum	21572526	CNVD
Congenital diaphragmatic hernia	21525063	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD

Chromatin state (count:1872 , 50 per page) page: 1 2 3 4 5 6 7 ... 38

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chrX:138855000-138915400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
2	chrX:138868200-138913600	Weak transcription	Left Ventricle	heart
3	chrX:138868600-138914000	Weak transcription	Stomach Smooth Muscle	stomach
4	chrX:138869000-138915600	Weak transcription	Fetal Stomach	stomach
5	chrX:138870600-138913400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
6	chrX:138880200-138913600	Weak transcription	Primary B cells from cord blood	blood
7	chrX:138881400-138913800	Weak transcription	Sigmoid Colon	Sigmoid Colon
8	chrX:138884000-138913600	Weak transcription	Fetal Thymus	thymus
9	chrX:138884400-138913600	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
10	chrX:138888400-138913000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
11	chrX:138899600-138913000	Weak transcription	Primary T cells from cord blood	blood
12	chrX:138899800-138914200	Weak transcription	Primary T cells fromperipheralblood	blood
13	chrX:138900000-138913400	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
14	chrX:138900200-138912800	Weak transcription	Primary neutrophils fromperipheralblood	blood
15	chrX:138900200-138913000	Weak transcription	Primary T helper cells fromperipheralblood	blood
16	chrX:138900200-138913400	Weak transcription	Primary T killer memory cells from peripheral blood	blood
17	chrX:138900200-138915200	Weak transcription	Brain Germinal Matrix	brain
18	chrX:138900600-138913600	Weak transcription	Primary B cells from peripheral blood	blood
19	chrX:138903600-138913600	Weak transcription	Primary T helper cells PMA-I stimulated	--
20	chrX:138907000-138916800	Enhancers	iPS-15b Cell Line	embryonic stem cell
21	chrX:138907200-138916000	Enhancers	Liver	Liver
22	chrX:138907600-138914200	Enhancers	HUES48 Cell Line	embryonic stem cell
23	chrX:138907800-138913000	Weak transcription	Monocytes-CD14+_RO01746	blood
24	chrX:138908200-138917000	Weak transcription	K562	blood
25	chrX:138908400-138913000	Weak transcription	Fetal Heart	heart
26	chrX:138908400-138913200	Weak transcription	H9 Cell Line	embryonic stem cell
27	chrX:138908400-138913200	Weak transcription	Primary hematopoietic stem cells short term culture	blood
28	chrX:138908400-138913600	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
29	chrX:138908400-138913600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
30	chrX:138909000-138913800	Weak transcription	Duodenum Mucosa	Duodenum
31	chrX:138909200-138912800	Weak transcription	Primary monocytes fromperipheralblood	blood
32	chrX:138909200-138913000	Weak transcription	Brain Hippocampus Middle	brain
33	chrX:138909200-138914000	Weak transcription	HSMM	muscle
34	chrX:138909400-138913200	Weak transcription	Muscle Satellite Cultured Cells	--
35	chrX:138909400-138913200	Weak transcription	NHLF	lung
36	chrX:138909400-138913600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
37	chrX:138909600-138913200	Weak transcription	HUVEC	blood vessel
38	chrX:138909600-138913600	Weak transcription	NH-A	brain
39	chrX:138909800-138923200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
40	chrX:138910200-138915200	Enhancers	HUES6 Cell Line	embryonic stem cell
41	chrX:138910600-138914200	Weak transcription	A549	lung
42	chrX:138910600-138915600	Weak transcription	Fetal Intestine Small	intestine
43	chrX:138910600-138916400	Enhancers	HUES64 Cell Line	embryonic stem cell
44	chrX:138910800-138915600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
45	chrX:138911000-138912800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
46	chrX:138911000-138913000	Weak transcription	GM12878-XiMat	blood
47	chrX:138911200-138913200	Weak transcription	Stomach Mucosa	stomach
48	chrX:138911200-138913400	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
49	chrX:138911200-138915000	Enhancers	ES-I3 Cell Line	embryonic stem cell
50	chrX:138911400-138914400	Weak transcription	H1 Cell Line	embryonic stem cell

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