Variant report

Variant	rs141632263
Chromosome Location	chrX:138916465-138916466
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv532936	chrX:138687855-139384681	Enhancers Weak transcription Strong transcription Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	148 gene(s)	inside rSNPs	diseases
2	nsv491760	chrX:138780768-139283477	Active TSS Weak transcription Enhancers Strong transcription ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	147 gene(s)	inside rSNPs	diseases
3	nsv917353	chrX:138912620-139283492	Active TSS Flanking Active TSS Weak transcription Enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA	146 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chrX:138907000-138916800	Enhancers	iPS-15b Cell Line	embryonic stem cell
2	chrX:138908200-138917000	Weak transcription	K562	blood
3	chrX:138909800-138923200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chrX:138914400-138917200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
5	chrX:138914400-138931800	Weak transcription	Primary T cells from cord blood	blood
6	chrX:138914600-138916800	Enhancers	HUES48 Cell Line	embryonic stem cell
7	chrX:138914600-138916800	Weak transcription	Primary T helper cells fromperipheralblood	blood
8	chrX:138914600-138918800	Weak transcription	HMEC	breast
9	chrX:138914600-138926400	Weak transcription	Primary B cells from peripheral blood	blood
10	chrX:138914600-138934400	Weak transcription	Primary hematopoietic stem cells	blood
11	chrX:138915400-138916600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
12	chrX:138915600-138916600	Enhancers	HUES6 Cell Line	embryonic stem cell
13	chrX:138915600-138916800	Weak transcription	Osteobl	bone
14	chrX:138915800-138916600	Enhancers	Pancreas	Pancrea
15	chrX:138916200-138916600	Enhancers	GM12878-XiMat	blood
16	chrX:138916400-138916600	Enhancers	ES-WA7 Cell Line	embryonic stem cell
17	chrX:138916400-138916600	Enhancers	Liver	Liver
18	chrX:138916400-138917200	Enhancers	ES-I3 Cell Line	embryonic stem cell
19	chrX:138916400-138917400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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