Variant report

Variant nsv945965
Chromosome Location chr1:57003085-57005467
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:199 , 50 per page) page: 1 2 3 4
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:56987000-57015000 Genic enhancers NHDF-Ad bronchial
2 chr1:56990000-57004000 Genic enhancers Liver Liver
3 chr1:56992800-57011200 Weak transcription Stomach Mucosa stomach
4 chr1:56993000-57004600 Weak transcription Hela-S3 cervix
5 chr1:56993600-57007800 Weak transcription Primary B cells from cord blood blood
6 chr1:56993800-57004200 Weak transcription NH-A brain
7 chr1:56994000-57004000 Weak transcription HUVEC blood vessel
8 chr1:56994000-57012400 Weak transcription Fetal Brain Male brain
9 chr1:56994000-57012800 Weak transcription Fetal Brain Female brain
10 chr1:56994200-57004400 Strong transcription Muscle Satellite Cultured Cells --
11 chr1:56995000-57003400 Strong transcription Fetal Muscle Trunk muscle
12 chr1:56995000-57003600 Strong transcription Osteobl bone
13 chr1:56995200-57003800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
14 chr1:56995600-57004600 Weak transcription Colon Smooth Muscle Colon
15 chr1:56995800-57004000 Genic enhancers HepG2 liver
16 chr1:56996600-57004000 Strong transcription HSMM muscle
17 chr1:56996600-57005200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
18 chr1:56997000-57003400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
19 chr1:56997200-57004600 Genic enhancers Placenta Placenta
20 chr1:56997600-57004400 Genic enhancers Fetal Muscle Leg muscle
21 chr1:56997800-57003600 Genic enhancers Skeletal Muscle Female skeletal muscle
22 chr1:56998600-57003800 Strong transcription Fetal Stomach stomach
23 chr1:56999400-57012800 Weak transcription HSMMtube muscle
24 chr1:57000000-57003800 Strong transcription Breast Myoepithelial Primary Cells Breast
25 chr1:57000000-57004200 Enhancers ES-I3 Cell Line embryonic stem cell
26 chr1:57000200-57005000 Weak transcription Rectal Smooth Muscle rectum
27 chr1:57000200-57008200 Weak transcription Fetal Kidney kidney
28 chr1:57000400-57004000 Strong transcription NHLF lung
29 chr1:57000400-57011000 Weak transcription Gastric stomach
30 chr1:57000400-57013000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr1:57000600-57003800 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
32 chr1:57000600-57005400 Weak transcription Colonic Mucosa Colon
33 chr1:57000800-57004000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
34 chr1:57001000-57004000 Genic enhancers Fetal Intestine Large intestine
35 chr1:57001000-57004200 Enhancers Pancreas Pancrea
36 chr1:57001200-57018800 Weak transcription A549 lung
37 chr1:57001400-57004600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
38 chr1:57001800-57003400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
39 chr1:57001800-57003400 Weak transcription Brain Inferior Temporal Lobe brain
40 chr1:57001800-57003600 Weak transcription Rectal Mucosa Donor 29 rectum
41 chr1:57001800-57018600 Weak transcription Small Intestine intestine
42 chr1:57001800-57021800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
43 chr1:57002000-57003200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr1:57002000-57004000 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
45 chr1:57002000-57004000 Enhancers Fetal Thymus thymus
46 chr1:57002200-57004400 Weak transcription Primary neutrophils fromperipheralblood blood
47 chr1:57002200-57004400 Enhancers Psoas Muscle Psoas
48 chr1:57002400-57003400 Strong transcription Cortex derived primary cultured neurospheres brain
49 chr1:57002400-57003600 Weak transcription Brain Angular Gyrus brain
50 chr1:57002400-57004600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived

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