Variant report

Variant	nsv948556
Chromosome Location	chr8:125067187-125204721
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:990)
CpG islands
(count:673)
Chromatin interactive
region (count:119)
LncRNA
region (count:6)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:990 , 50 per page) page: 1 2 3 4 5 6 7 ... 20

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr8:125108825-125109113	HepG2	liver:	n/a	n/a
2	ARID3A	chr8:125116366-125116712	HepG2	liver:	n/a	n/a
3	ATF1	chr8:125121347-125121686	K562	blood:	n/a	n/a
4	ATF1	chr8:125123077-125123301	K562	blood:	n/a	n/a
5	ATF1	chr8:125153711-125153973	K562	blood:	n/a	n/a
6	ATF2	chr8:125153628-125154017	GM12878	blood:	n/a	n/a
7	BACH1	chr8:125174944-125174964	K562	blood:	n/a	n/a
8	BACH1	chr8:125083089-125083110	K562	blood:	n/a	n/a
9	BATF	chr8:125153677-125153936	GM12878	blood:	n/a	n/a
10	BATF	chr8:125153614-125154008	GM12878	blood:	n/a	n/a
11	BCL11A	chr8:125153624-125154025	GM12878	blood:	n/a	n/a
12	BHLHE40	chr8:125083937-125084280	K562	blood:	n/a	n/a
13	BHLHE40	chr8:125172594-125172694	K562	blood:	n/a	chr8:125172655-125172668 chr8:125172656-125172665 chr8:125172657-125172666 chr8:125172657-125172666 chr8:125172651-125172672
14	BHLHE40	chr8:125121555-125121676	K562	blood:	n/a	n/a
15	BRCA1	chr8:125184079-125184280	HepG2	liver:	n/a	n/a
16	CCNT2	chr8:125177766-125178007	K562	blood:	n/a	n/a
17	CEBPB	chr8:125137018-125137115	H1-hESC	embryonic stem cell:	n/a	n/a
18	CEBPB	chr8:125123056-125123340	Hela-S3	cervix:	n/a	chr8:125123186-125123197
19	CEBPB	chr8:125188040-125188380	HepG2	liver:	n/a	chr8:125188212-125188223
20	CEBPB	chr8:125117237-125117339	A549	lung:	n/a	n/a
21	CEBPB	chr8:125073515-125073653	HepG2	liver:	n/a	n/a
22	CEBPB	chr8:125136976-125137155	K562	blood:	n/a	n/a
23	CEBPB	chr8:125153678-125153964	IMR90	lung:	n/a	n/a
24	CEBPB	chr8:125188049-125188401	IMR90	lung:	n/a	chr8:125188212-125188223
25	CEBPB	chr8:125202031-125202127	A549	lung:	n/a	n/a
26	CEBPB	chr8:125188115-125188303	H1-hESC	embryonic stem cell:	n/a	chr8:125188212-125188223
27	CEBPB	chr8:125123065-125123349	H1-hESC	embryonic stem cell:	n/a	chr8:125123186-125123197
28	CEBPB	chr8:125188081-125188362	K562	blood:	n/a	chr8:125188212-125188223
29	CEBPB	chr8:125123116-125123249	HepG2	liver:	n/a	chr8:125123186-125123197
30	CEBPB	chr8:125195566-125195946	IMR90	lung:	n/a	n/a
31	CEBPB	chr8:125193553-125194201	IMR90	lung:	n/a	n/a
32	CEBPB	chr8:125123110-125123247	IMR90	lung:	n/a	chr8:125123186-125123197
33	CEBPB	chr8:125116477-125116678	HepG2	liver:	n/a	n/a
34	CEBPB	chr8:125188112-125188399	Hela-S3	cervix:	n/a	chr8:125188212-125188223
35	CEBPB	chr8:125122910-125123389	K562	blood:	n/a	chr8:125123186-125123197
36	CEBPB	chr8:125193534-125194156	MCF-7	breast:	n/a	n/a
37	CEBPB	chr8:125109061-125109245	IMR90	lung:	n/a	n/a
38	CEBPB	chr8:125193572-125194178	ECC-1	luminal epithelium:	n/a	n/a
39	CEBPB	chr8:125123088-125123335	K562	blood:	n/a	chr8:125123186-125123197
40	CEBPB	chr8:125109082-125109293	HepG2	liver:	n/a	n/a
41	CEBPB	chr8:125192433-125193098	MCF-7	breast:	n/a	n/a
42	CEBPB	chr8:125121554-125121564	K562	blood:	n/a	n/a
43	CEBPB	chr8:125192568-125192889	IMR90	lung:	n/a	n/a
44	CEBPB	chr8:125187323-125187770	IMR90	lung:	n/a	n/a
45	CEBPB	chr8:125073498-125073645	K562	blood:	n/a	n/a
46	CEBPB	chr8:125123129-125123302	HepG2	liver:	n/a	chr8:125123186-125123197
47	CEBPB	chr8:125123054-125123456	MCF-7	breast:	n/a	chr8:125123186-125123197
48	CEBPB	chr8:125188101-125188390	A549	lung:	n/a	chr8:125188212-125188223
49	CEBPB	chr8:125123000-125123380	K562	blood:	n/a	chr8:125123186-125123197
50	CEBPB	chr8:125192401-125193043	MCF-7	breast:	n/a	n/a

(count:673 , 50 per page) page: 1 2 3 4 5 6 7 ... 14

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr8:125123369-125123419	Hela-S3	cervix:	n/a
2	chr8:125132056-125132106	U87	brain:	n/a
3	chr8:125123369-125123419	Hela-S3	cervix:	n/a
4	chr8:125132056-125132106	U87	brain:	n/a
5	chr8:125132056-125132106	NHDF-neo	bronchial:	n/a
6	chr8:125183776-125183826	PrEC	prostate:	n/a
7	chr8:125132056-125132106	HUVEC	blood vessel:	n/a
8	chr8:125183790-125183840	CMK	blood:	n/a
9	chr8:125102419-125102469	Hela-S3	cervix:	n/a
10	chr8:125159267-125159317	HRE	kidney:	n/a
11	chr8:125123369-125123419	GM19239	blood:	n/a
12	chr8:125183790-125183840	PrEC	prostate:	n/a
13	chr8:125116635-125116685	AG10803	skin:	n/a
14	chr8:125132056-125132106	HCF	heart:	n/a
15	chr8:125150452-125150502	HCPEpiC	choroid plexus:	n/a
16	chr8:125159267-125159317	HEK293	kidney:	embryo
17	chr8:125159267-125159317	HEEpiC	esophagus:	n/a
18	chr8:125183776-125183826	U87	brain:	n/a
19	chr8:125132056-125132106	Jurkat	blood:	n/a
20	chr8:125183776-125183826	BE2_C	brain:	n/a
21	chr8:125116635-125116685	BJ	skin:	n/a
22	chr8:125150452-125150502	AG10803	skin:	n/a
23	chr8:125183776-125183826	PANC-1	pancreas:	n/a
24	chr8:125116635-125116685	MCF-7	breast:	n/a
25	chr8:125183758-125183808	BJ	skin:	n/a
26	chr8:125159267-125159317	H1-hESC	embryonic stem cell:	embryo
27	chr8:125183790-125183840	SK-N-SH	brain:	n/a
28	chr8:125116635-125116685	MCF10A-Er-Src	breast:	n/a
29	chr8:125183758-125183808	AG09319	gingival:	n/a
30	chr8:125183988-125184038	HepG2	liver:	n/a
31	chr8:125150452-125150502	ovcar-3	ovarian:	n/a
32	chr8:125183758-125183808	SAEC	small airway:	n/a
33	chr8:125183790-125183840	PANC-1	pancreas:	n/a
34	chr8:125159267-125159317	PFSK-1	brain:	n/a
35	chr8:125116635-125116685	HMEC	breast:	n/a
36	chr8:125116635-125116685	NHBE	bronchial:	n/a
37	chr8:125150452-125150502	PFSK-1	brain:	n/a
38	chr8:125183790-125183840	Caco-2	colon:	n/a
39	chr8:125193955-125194005	HAEpiC	amniotic membrane:	n/a
40	chr8:125183758-125183808	HRCEpiC	kidney:	n/a
41	chr8:125183988-125184038	AG04450	lung:	fetal
42	chr8:125159267-125159317	Hepatocyte	liver:	n/a
43	chr8:125183758-125183808	HL-60	blood:	n/a
44	chr8:125183988-125184038	HL-60	blood:	n/a
45	chr8:125150452-125150502	HRCEpiC	kidney:	n/a
46	chr8:125159267-125159317	Jurkat	blood:	n/a
47	chr8:125183776-125183826	GM12892	blood:	n/a
48	chr8:125102419-125102469	U87	brain:	n/a
49	chr8:125123369-125123419	ECC-1	luminal epithelium:	n/a
50	chr8:125193955-125194005	GM19239	blood:	n/a

(count:119 , 50 per page) page: 1 2 3

No.	Distal block	Cell Line	Cell type
1	chr8:125191478..125193421-chr8:125198562..125200615,2	K562	blood:
2	chr8:125150444..125155407-chr8:125156319..125163241,13	MCF-7	breast:
3	chr8:125201433..125203179-chr8:125210038..125211818,2	MCF-7	breast:
4	chr8:125162472..125164935-chr8:125272607..125274873,2	MCF-7	breast:
5	chr8:125110351..125112289-chr8:125114668..125117453,3	MCF-7	breast:
6	chr8:125197907..125200093-chr8:125207154..125210134,2	K562	blood:
7	chr8:125165500..125168321-chr8:125173851..125175467,2	MCF-7	breast:
8	chr8:125164565..125167204-chr8:125170929..125173485,2	MCF-7	breast:
9	chr8:125175881..125178146-chr8:125178944..125180876,2	K562	blood:
10	chr8:125108933..125111615-chr8:125153576..125155257,2	MCF-7	breast:
11	chr8:125159144..125163463-chr8:125165911..125169919,5	MCF-7	breast:
12	chr8:125140591..125143407-chr8:125149465..125152735,3	K562	blood:
13	chr8:125156644..125159678-chr8:125159936..125163008,3	MCF-7	breast:
14	chr8:125159144..125163463-chr8:125165911..125169919,5	MCF-7	breast:
15	chr8:125201029..125203586-chr8:125205686..125208127,3	MCF-7	breast:
16	chr8:125181319..125184229-chr8:125185870..125187642,2	K562	blood:
17	chr8:125052777..125055387-chr8:125192155..125193745,2	MCF-7	breast:
18	chr8:125152608..125156018-chr8:125157975..125161027,5	MCF-7	breast:
19	chr8:125137801..125139621-chr8:125139751..125142075,2	MCF-7	breast:
20	chr8:125147766..125150713-chr8:125237098..125239793,2	MCF-7	breast:
21	chr8:125157559..125159773-chr8:125164004..125165618,2	K562	blood:
22	chr8:125110351..125112289-chr8:125114668..125117453,3	MCF-7	breast:
23	chr8:125102376..125106227-chr8:125106854..125110731,4	MCF-7	breast:
24	chr8:125049707..125050529-chr8:125160147..125160863,2	MCF-7	breast:
25	chr8:125156644..125159678-chr8:125159936..125163008,3	MCF-7	breast:
26	chr8:125124581..125127109-chr8:125134035..125137231,3	MCF-7	breast:
27	chr8:125168785..125170511-chr8:125190610..125193215,2	MCF-7	breast:
28	chr8:125078998..125082255-chr8:125082852..125085569,3	MCF-7	breast:
29	chr8:125066429..125069307-chr8:125073491..125075703,2	K562	blood:
30	chr8:125158434..125162428-chr8:125172218..125174995,4	MCF-7	breast:
31	chr8:125176216..125179479-chr8:125188230..125192521,3	MCF-7	breast:
32	chr8:125148790..125152078-chr8:125191101..125194599,4	MCF-7	breast:
33	chr8:125126178..125129165-chr8:125131019..125132893,2	K562	blood:
34	chr8:125050434..125051321-chr8:125181614..125182275,2	MCF-7	breast:
35	chr8:125176216..125179479-chr8:125188230..125192521,3	MCF-7	breast:
36	chr8:125169275..125171138-chr8:125176214..125178792,2	K562	blood:
37	chr8:125073277..125075066-chr8:125078530..125080434,2	K562	blood:
38	chr8:125142748..125144458-chr8:125384117..125386876,2	MCF-7	breast:
39	chr8:125181108..125183361-chr8:125183999..125186422,2	MCF-7	breast:
40	chr8:125121959..125124333-chr8:125125776..125127999,2	MCF-7	breast:
41	chr8:125144844..125146869-chr8:125149963..125151854,2	K562	blood:
42	chr8:125181108..125183361-chr8:125183999..125186422,2	MCF-7	breast:
43	chr8:125078998..125082255-chr8:125082852..125085569,3	MCF-7	breast:
44	chr8:125118890..125120485-chr8:125122820..125124432,2	K562	blood:
45	chr8:125159111..125160686-chr8:125174185..125175768,2	K562	blood:
46	chr8:125134129..125136580-chr8:125137692..125139754,2	MCF-7	breast:
47	chr8:125090772..125094990-chr8:125105742..125107910,3	MCF-7	breast:
48	chr8:125050806..125053292-chr8:125190826..125192450,2	MCF-7	breast:
49	chr8:125093878..125096444-chr8:125098897..125100549,2	K562	blood:
50	chr8:125192128..125194093-chr8:125383543..125386541,2	MCF-7	breast:

(count:6 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-TMEM65-5	chr8:125122048-125122204	ucscGeneNc_uc003yqx_1
2	lnc-TMEM65-5	chr8:125085611-125085653	ucscGeneNc_uc003yqx_1
3	lnc-TMEM65-5	chr8:125065559-125067194	ucscGeneNc_uc003yqx_1
4	lnc-TMEM65-5	chr8:125097294-125097463	ucscGeneNc_uc003yqx_1
5	lnc-TMEM65-5	chr8:125095015-125095131	ucscGeneNc_uc003yqx_1
6	lnc-TMEM65-5	chr8:125095704-125095895	ucscGeneNc_uc003yqx_1

No data

Variant related genes	Relation type
ARF1P3	TF binding region
ENSG00000250727	TF binding region
FER1L6-AS2	TF binding region
ARF1P3	CpG island
ENSG00000250727	CpG island
FER1L6-AS2	CpG island
ENSG00000254249	chromatin interactions
ENSG00000245149	chromatin interactions
ENSG00000250727	chromatin interactions
ENSG00000170881	chromatin interactions
ENSG00000206724	chromatin interactions
ENSG00000164983	chromatin interactions
ENSG00000181171	chromatin interactions
ENSG00000253868	chromatin interactions
ENSG00000253885	chromatin interactions
ENSG00000253227	chromatin interactions

Extended variants
information (count: 5125 )
Associated
traits (count: 144 )

Variant overlapped rSNPs/rCNVs (count:5125 , 50 per page) page: 1 2 3 4 5 6 7 ... 103

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs7009406	chr8:125067187-125067188	Weak transcription Enhancers Genic enhancers Bivalent Enhancer	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs147301279	chr8:125067193-125067194	Weak transcription Enhancers Genic enhancers Bivalent Enhancer	lncRNA	n/a	Overlapped CNVs	n/a
3	rs561478195	chr8:125067247-125067248	Weak transcription Enhancers Strong transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
4	rs139936600	chr8:125067291-125067292	Weak transcription Enhancers Strong transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
5	rs550326364	chr8:125067300-125067301	Weak transcription Enhancers Strong transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
6	rs570379036	chr8:125067341-125067342	Weak transcription Enhancers Strong transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
7	rs542029980	chr8:125067358-125067359	Weak transcription Enhancers Strong transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
8	rs76927696	chr8:125067376-125067377	Weak transcription Enhancers Strong transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
9	rs539055521	chr8:125067379-125067380	Weak transcription Enhancers Strong transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
10	rs537480298	chr8:125067457-125067458	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs560584417	chr8:125067483-125067484	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs376715825	chr8:125067497-125067498	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs547366241	chr8:125067500-125067501	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs368137202	chr8:125067516-125067517	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs536092706	chr8:125067539-125067540	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs555963381	chr8:125067540-125067541	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs149850799	chr8:125067557-125067558	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs572421335	chr8:125067575-125067576	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs6992212	chr8:125067597-125067598	Weak transcription Strong transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
20	rs115574805	chr8:125067607-125067608	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs578000416	chr8:125067672-125067673	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs540229063	chr8:125067683-125067684	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs190158393	chr8:125067700-125067701	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs555777234	chr8:125067738-125067739	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs7010375	chr8:125067786-125067787	Weak transcription Strong transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
26	rs148502373	chr8:125067791-125067792	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs561514414	chr8:125067799-125067800	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs530521807	chr8:125067800-125067801	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs181246461	chr8:125067811-125067812	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs80259689	chr8:125067813-125067814	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs186486122	chr8:125067831-125067832	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs77512429	chr8:125067939-125067940	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs116657323	chr8:125067986-125067987	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs191521367	chr8:125068049-125068050	Weak transcription Strong transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
35	rs374065649	chr8:125068050-125068051	Weak transcription Strong transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
36	rs144214572	chr8:125068067-125068068	Weak transcription Strong transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
37	rs549602956	chr8:125068168-125068169	Weak transcription Strong transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
38	rs569394449	chr8:125068188-125068189	Weak transcription Strong transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
39	rs565097008	chr8:125068219-125068220	Weak transcription Strong transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
40	rs73328371	chr8:125068223-125068224	Weak transcription Strong transcription Enhancers ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
41	rs558276300	chr8:125068225-125068226	Weak transcription Strong transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
42	rs571627747	chr8:125068232-125068233	Weak transcription Strong transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
43	rs533965251	chr8:125068270-125068271	Weak transcription Strong transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
44	rs368874515	chr8:125068294-125068295	Weak transcription Strong transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
45	rs553714203	chr8:125068337-125068338	Weak transcription Strong transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
46	rs572820241	chr8:125068471-125068472	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs541673665	chr8:125068509-125068510	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs182145618	chr8:125068521-125068522	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs575444714	chr8:125068522-125068523	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs544056984	chr8:125068536-125068537	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:144)

Disease	PMID	Source
Medulloblastoma	21979893	CNVD
Ewing''s sarcoma	21437220	CNVD
Autism	19415332	CNVD
Malaria	21533027	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Esophageal cancer	21851588	CNVD
Gastric cancer	17908304	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Breast cancer	21245420	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Liver carcinoma	19366792	CNVD
Seminomas	18059402	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Pancreatic cancer	21811587	CNVD
Thyroid cancer	19087340	CNVD
Myelofibrosis	22110671	CNVD
Testicular cancer	18059402	CNVD
Breast cancer	17133270	CNVD
Breast cancer	21509527	CNVD
Breast cancer	21858162	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
abnormal development	18461090	CNVD
Oral cancer	21386901	CNVD
Uveal melanoma	21693616	CNVD
Langer-Giedion syndrome	22283845	CNVD
Cancer	21637783	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Breast cancer	20632083	CNVD
Breast cancer	17603634	CNVD
Breast cancer	19602461	CNVD
Cancer	22429812	CNVD
Endometrial cancer	22040021	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	21080181	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oral cancer	19627613	CNVD
Prostate cancer	21088497	CNVD
colon cancer	17210682	CNVD
Breast cancer	21264507	CNVD
Breast cancer	22028636	CNVD
Acute myeloid leukemia	16864856	CNVD
Cancer	16751803	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Gastric cancer	17167181	CNVD
Colorectal cancer	19359472	CNVD
Breast cancer	16461572	CNVD
Human rectal carcinomas	16397240	CNVD
Medulloblastoma	16968546	CNVD
head and neck squamous cell carcinoma	18028549	CNVD
Breast cancer	17001317	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Acute myeloid leukemia	20729466	CNVD
Ewing''s sarcoma	17952124	CNVD
Urothelial carcinoma	21177765	CNVD
Lung cancer	18438408	CNVD
Breast cancer	16608533	CNVD
Metanephric adenoma	20802469	CNVD
Hepatocellular carcinoma	18803288	CNVD
Prostate cancer	18632612	CNVD
Ovarian cancer	22174824	CNVD
Prostate cancer	16573809	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Carcinoma ex pleomorphic adenoma	18828159	CNVD
Adenocarcinoma	21044232	CNVD
Squamous cell cancer	20885788	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Prostate cancer	16461572	CNVD
Breast cancer	21399628	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Breast cancer	17393978	CNVD
Burkitt''s lymphoma	18698080	CNVD
Non-syndromic sensorineural hearing loss	20606397	CNVD
Breast cancer	17899364	CNVD
Acute myeloid leukemia	21251322	CNVD
lymphocytic leukemia	21291569	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Developmental delay	21147756	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Congenital diaphragmatic hernia	21525063	CNVD
Non-small cell lung cancer	19010865	CNVD
small cell lung cancer	20016488	CNVD
Papillary thyroid cancer	17515504	CNVD
Basal cell lymphoma	17053054	CNVD
Breast cancer	20932292	CNVD
Gastric cancer	22539939	CNVD
Breast cancer	22056952	CNVD
Langer-Giedion syndrome	16773131	CNVD
Lung cancer	16740712	CNVD
Mental retardation	16773131	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Langer-Giedion syndrome	22470819	CNVD
Cornelia de Lange syndrome	24599119	CNVD
Gastric cancer	21528007	CNVD
Breast cancer	22532251	CNVD
Cervical cancer	21062161	CNVD
Cancer	21129771	CNVD
benign familial neonatal convulsions	18472482	CNVD
Breast cancer	16417655	CNVD
Astrocytoma	17387387	CNVD
Cancer	21183584	CNVD
Follicular lymphoma	20505157	CNVD
T-cell lymphomas	19863542	CNVD
Colorectal cancer	20709793	CNVD
Medulloblastoma	20607354	CNVD
Breast cancer	20814816	CNVD
Colorectal cancer	22486879	CNVD
Breast cancer	17908964	CNVD
Colorectal cancer	20031965	CNVD
Hepatocellular carcinoma	16750200	CNVD
Ovarian cancer	17908964	CNVD
Ovarian cancer	20031965	CNVD
Prostate cancer	20031965	CNVD
Non-small cell lung cancer	17643093	CNVD
Prostate cancer	19242612	CNVD
Colorectal cancer	16774939	CNVD
Multiple myeloma	17550852	CNVD
Glioblastoma multiforme	18628472	CNVD
Malignant melanoma	17260012	CNVD
Intracranial aneurysm	16715129	CNVD
Breast cancer	16397240	CNVD
Multiple myeloma	16461302	CNVD
Multiple myeloma	16616336	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Breast cancer	21364760	CNVD
Burkitt''s lymphoma	20823134	CNVD
Colorectal cancer	21645411	CNVD
Congenital anomalies of the kidney and urinary tract	20467480	CNVD
Barrett''s adenocarcinoma	18663352	CNVD
Acute myeloid leukemia	17268525	CNVD
Acute myeloid leukemia	18379011	CNVD
Esophageal squamous carcinoma	18405350	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Oral squamous cell carcinoma	21853135	CNVD
Breast cancer	21611746	CNVD
Ductal carcinoma	22052326	CNVD
Schizophrenia	23813976	CNVD
Gastric cancer	18160780	CNVD
Cancer	20164919	CNVD
Prostate cancer	22341455	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:786 , 50 per page) page: 1 2 3 4 5 6 7 ... 16

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:125052600-125083600	Weak transcription	Gastric	stomach
2	chr8:125064400-125078600	Weak transcription	Stomach Mucosa	stomach
3	chr8:125065200-125067200	Enhancers	Cortex derived primary cultured neurospheres	brain
4	chr8:125065400-125067200	Genic enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr8:125065800-125067400	Bivalent Enhancer	NHDF-Ad	bronchial
6	chr8:125066200-125067400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
7	chr8:125066200-125071600	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
8	chr8:125066400-125068000	Weak transcription	Fetal Stomach	stomach
9	chr8:125066800-125068000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
10	chr8:125066800-125068600	Enhancers	Primary hematopoietic stem cells short term culture	blood
11	chr8:125067000-125067200	Enhancers	Psoas Muscle	Psoas
12	chr8:125067000-125071000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
13	chr8:125067200-125068000	Enhancers	HepG2	liver
14	chr8:125067200-125068400	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
15	chr8:125067600-125068200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
16	chr8:125067800-125068200	Enhancers	Primary hematopoietic stem cells	blood
17	chr8:125068000-125068400	ZNF genes & repeats	Fetal Stomach	stomach
18	chr8:125068400-125072800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
19	chr8:125068600-125069000	Weak transcription	Fetal Stomach	stomach
20	chr8:125069800-125070600	Enhancers	Fetal Intestine Small	intestine
21	chr8:125070200-125070800	Enhancers	Fetal Intestine Large	intestine
22	chr8:125070200-125071200	Enhancers	Fetal Heart	heart
23	chr8:125070400-125070600	Bivalent Enhancer	Osteobl	bone
24	chr8:125070800-125072200	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
25	chr8:125070800-125072600	Enhancers	Cortex derived primary cultured neurospheres	brain
26	chr8:125071000-125071600	Enhancers	Fetal Brain Male	brain
27	chr8:125071000-125074800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
28	chr8:125071600-125074400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
29	chr8:125072800-125074200	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
30	chr8:125073600-125074000	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
31	chr8:125073600-125074200	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
32	chr8:125074000-125074200	Bivalent Enhancer	Fetal Muscle Trunk	muscle
33	chr8:125074200-125074400	Enhancers	Fetal Muscle Trunk	muscle
34	chr8:125074200-125074800	Genic enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
35	chr8:125074800-125095400	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
36	chr8:125076600-125076800	Enhancers	Psoas Muscle	Psoas
37	chr8:125076800-125121800	Weak transcription	Fetal Stomach	stomach
38	chr8:125078000-125078800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
39	chr8:125078600-125081800	Strong transcription	Stomach Mucosa	stomach
40	chr8:125079600-125080800	Enhancers	Right Atrium	heart
41	chr8:125079600-125081000	Enhancers	Skeletal Muscle Female	skeletal muscle
42	chr8:125079800-125081200	Enhancers	Fetal Heart	heart
43	chr8:125080000-125080200	Enhancers	Left Ventricle	heart
44	chr8:125080000-125081000	Enhancers	Skeletal Muscle Male	skeletal muscle
45	chr8:125080200-125090000	Weak transcription	Left Ventricle	heart
46	chr8:125080400-125081000	Enhancers	Ovary	ovary
47	chr8:125080600-125080800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
48	chr8:125081800-125083200	Weak transcription	Stomach Mucosa	stomach
49	chr8:125082400-125089200	Weak transcription	Sigmoid Colon	Sigmoid Colon
50	chr8:125083200-125084400	Strong transcription	Stomach Mucosa	stomach

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links