Variant report

Variant	nsv961287
Chromosome Location	chr19:37708789-37742224
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:763)
CpG islands
(count:672)
Chromatin interactive
region (count:20)
LncRNA
region (count:3)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:763 , 50 per page) page: 1 2 3 4 5 6 7 ... 16

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr19:37708620-37709694	HepG2	liver:	n/a	n/a
2	ATF1	chr19:37708602-37709660	K562	blood:	n/a	n/a
3	ATF3	chr19:37708364-37709560	A549	lung:	n/a	n/a
4	BACH1	chr19:37738119-37738120	K562	blood:	n/a	n/a
5	BCL3	chr19:37708489-37709927	A549	lung:	n/a	n/a
6	BCL3	chr19:37708401-37709564	A549	lung:	n/a	n/a
7	BCLAF1	chr19:37708485-37709394	GM12878	blood:	n/a	n/a
8	BCLAF1	chr19:37708559-37709397	GM12878	blood:	n/a	n/a
9	BHLHE40	chr19:37708667-37709801	K562	blood:	n/a	n/a
10	BHLHE40	chr19:37708320-37709840	GM12878	blood:	n/a	n/a
11	BRCA1	chr19:37708500-37709092	HepG2	liver:	n/a	n/a
12	BRCA1	chr19:37708874-37709494	GM12878	blood:	n/a	n/a
13	CBX3	chr19:37708546-37709210	K562	blood:	n/a	n/a
14	CBX3	chr19:37718996-37719192	K562	blood:	n/a	n/a
15	CCNT2	chr19:37708948-37709268	K562	blood:	n/a	n/a
16	CEBPB	chr19:37708885-37709572	HepG2	liver:	n/a	chr19:37709381-37709392
17	CEBPB	chr19:37710160-37710295	H1-hESC	embryonic stem cell:	n/a	chr19:37710213-37710224
18	CEBPB	chr19:37711326-37711629	A549	lung:	n/a	n/a
19	CEBPB	chr19:37711384-37711595	HepG2	liver:	n/a	n/a
20	CEBPB	chr19:37725882-37726049	HepG2	liver:	n/a	n/a
21	CEBPB	chr19:37708650-37710368	K562	blood:	n/a	chr19:37710213-37710224 chr19:37709381-37709392
22	CEBPB	chr19:37710158-37710361	A549	lung:	n/a	chr19:37710213-37710224
23	CEBPB	chr19:37711371-37711535	K562	blood:	n/a	n/a
24	CEBPB	chr19:37708828-37709498	GM12878	blood:	n/a	chr19:37709381-37709392
25	CEBPB	chr19:37725818-37725935	A549	lung:	n/a	n/a
26	CEBPB	chr19:37710127-37710354	HepG2	liver:	n/a	chr19:37710213-37710224
27	CEBPB	chr19:37708837-37709804	IMR90	lung:	n/a	chr19:37709381-37709392
28	CEBPB	chr19:37717287-37717521	A549	lung:	n/a	n/a
29	CEBPB	chr19:37711383-37711552	H1-hESC	embryonic stem cell:	n/a	n/a
30	CEBPD	chr19:37708985-37709320	HepG2	liver:	n/a	n/a
31	CEBPD	chr19:37708583-37708823	HepG2	liver:	n/a	n/a
32	CHD1	chr19:37708336-37709497	GM12878	blood:	n/a	chr19:37709293-37709303
33	CHD2	chr19:37708600-37709611	K562	blood:	n/a	chr19:37709293-37709303
34	CHD2	chr19:37708508-37709275	H1-hESC	embryonic stem cell:	n/a	n/a
35	CHD2	chr19:37708627-37709276	HepG2	liver:	n/a	n/a
36	CHD2	chr19:37708627-37709661	Hela-S3	cervix:	n/a	chr19:37709293-37709303
37	CHD2	chr19:37708566-37709650	GM12878	blood:	n/a	chr19:37709293-37709303
38	CREB1	chr19:37708623-37709378	A549	lung:	n/a	n/a
39	CREB1	chr19:37708482-37709657	HepG2	liver:	n/a	n/a
40	CREB1	chr19:37708472-37709492	GM12878	blood:	n/a	n/a
41	CREB1	chr19:37708540-37708923	A549	lung:	n/a	n/a
42	CREB1	chr19:37708925-37709234	A549	lung:	n/a	n/a
43	CTCF	chr19:37718888-37719241	H1-hESC	embryonic stem cell:	n/a	n/a
44	CTCF	chr19:37719080-37719230	GM12873	blood:	n/a	n/a
45	CTCF	chr19:37719120-37719270	GM06990	blood:	n/a	n/a
46	CTCF	chr19:37719100-37719250	HRPEpiC	eye:	n/a	n/a
47	CTCF	chr19:37719080-37719230	Caco-2	colon:	n/a	n/a
48	CTCF	chr19:37719000-37719150	HFF-Myc	foreskin:	n/a	n/a
49	CTCF	chr19:37719100-37719250	NHLF	lung:	n/a	n/a
50	CTCF	chr19:37719080-37719230	GM12870	blood:	n/a	n/a

(count:672 , 50 per page) page: 1 2 3 4 5 6 7 ... 14

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr19:37716611-37716661	HCF	heart:	n/a
2	chr19:37716611-37716661	HCF	heart:	n/a
3	chr19:37711193-37711243	GM19239	blood:	n/a
4	chr19:37711193-37711243	HRPEpiC	eye:	n/a
5	chr19:37732180-37732230	HRCEpiC	kidney:	n/a
6	chr19:37719008-37719058	GM12891	blood:	n/a
7	chr19:37732180-37732230	HCM	heart:	n/a
8	chr19:37732180-37732230	HAEpiC	amniotic membrane:	n/a
9	chr19:37716611-37716661	HCM	heart:	n/a
10	chr19:37711193-37711243	SKMC	muscle:	n/a
11	chr19:37709068-37709118	HCPEpiC	choroid plexus:	n/a
12	chr19:37709707-37709757	MCF10A-Er-Src	breast:	n/a
13	chr19:37709068-37709118	GM12891	blood:	n/a
14	chr19:37732180-37732230	PFSK-1	brain:	n/a
15	chr19:37732180-37732230	MCF-7	breast:	n/a
16	chr19:37739757-37739807	HUVEC	blood vessel:	n/a
17	chr19:37711193-37711243	HepG2	liver:	n/a
18	chr19:37709070-37709120	HCPEpiC	choroid plexus:	n/a
19	chr19:37709070-37709120	HepG2	liver:	n/a
20	chr19:37709070-37709120	HCT-116	colon:	n/a
21	chr19:37710094-37710144	GM12892	blood:	n/a
22	chr19:37732180-37732230	SK-N-SH	brain:	n/a
23	chr19:37739757-37739807	NHDF-neo	bronchial:	n/a
24	chr19:37711193-37711243	RPTEC	kidney:	n/a
25	chr19:37710094-37710144	HRCEpiC	kidney:	n/a
26	chr19:37732180-37732230	BE2_C	brain:	n/a
27	chr19:37719008-37719058	MCF10A-Er-Src	breast:	n/a
28	chr19:37716611-37716661	ovcar-3	ovarian:	n/a
29	chr19:37708884-37708934	AG09319	gingival:	n/a
30	chr19:37716611-37716661	U87	brain:	n/a
31	chr19:37709434-37709484	AG09309	skin:	n/a
32	chr19:37710094-37710144	A549	lung:	n/a
33	chr19:37719008-37719058	PFSK-1	brain:	n/a
34	chr19:37711193-37711243	HCPEpiC	choroid plexus:	n/a
35	chr19:37708884-37708934	NHDF-neo	bronchial:	n/a
36	chr19:37716611-37716661	BJ	skin:	n/a
37	chr19:37719008-37719058	AoSMC	blood vessel:	n/a
38	chr19:37732180-37732230	GM06990	blood:	n/a
39	chr19:37709070-37709120	GM12878	blood:	n/a
40	chr19:37709070-37709120	HPAEpiC	pulmonary alveolar:	n/a
41	chr19:37709434-37709484	HIPEpiC	eye:	n/a
42	chr19:37709707-37709757	GM12892	blood:	n/a
43	chr19:37716611-37716661	NB4	blood:	n/a
44	chr19:37710094-37710144	LNCaP	prostate:	n/a
45	chr19:37711193-37711243	BJ	skin:	n/a
46	chr19:37709068-37709118	HNPCEpiC	eye:	n/a
47	chr19:37708884-37708934	HPAEpiC	pulmonary alveolar:	n/a
48	chr19:37709068-37709118	HL-60	blood:	n/a
49	chr19:37732180-37732230	HRE	kidney:	n/a
50	chr19:37719008-37719058	IMR90	lung:	fetal

(count:20 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr19:37699969..37703002-chr19:37707384..37710417,4	MCF-7	breast:
2	chr19:37328417..37330040-chr19:37708183..37710302,2	MCF-7	breast:
3	chr19:37696561..37699381-chr19:37708371..37710219,3	MCF-7	breast:
4	chr19:37709557..37710298-chr4:177325105..177325952,2	MCF-7	breast:
5	chr19:37567784..37569957-chr19:37706405..37709557,3	MCF-7	breast:
6	chr19:37731883..37734726-chr19:37736593..37738662,2	K562	blood:
7	chr19:37463031..37465781-chr19:37707432..37709239,2	MCF-7	breast:
8	chr10:104192093..104192656-chr19:37708759..37709508,2	NB4	blood:
9	chr19:37714409..37716526-chr19:37718369..37720746,2	K562	blood:
10	chr19:37662285..37665074-chr19:37707652..37711059,3	K562	blood:
11	chr19:37700579..37702505-chr19:37711675..37713622,2	K562	blood:
12	chr19:37740273..37743128-chr19:37823150..37825762,2	MCF-7	breast:
13	chr19:37699250..37701731-chr19:37707688..37710566,5	MCF-7	breast:
14	chr19:37731883..37734726-chr19:37736593..37738662,2	K562	blood:
15	chr19:37568801..37570844-chr19:37707204..37709199,3	K562	blood:
16	chr19:37708605..37710654-chr19:37725265..37728083,2	MCF-7	breast:
17	chr19:37567228..37570692-chr19:37707204..37709250,4	K562	blood:
18	chr19:37662710..37665074-chr19:37707652..37710063,2	K562	blood:
19	chr19:37707730..37710581-chr19:37712295..37715245,3	MCF-7	breast:
20	chr19:37700501..37704644-chr19:37706690..37710773,7	K562	blood:

(count:3 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ZNF383-2	chr19:37709085-37709176	NONHSAT066078
2	lnc-ZNF383-2	chr19:37715720-37716114	NONHSAT066078
3	lnc-ZNF585B-2	chr19:37708520-37709055	NONHSAT066076

No data

Variant related genes	Relation type
ENSG00000226686	TF binding region
ZNF383	TF binding region
ZNF585B	TF binding region
ENSG00000226686	CpG island
ZNF383	CpG island
ZNF585B	CpG island
ENSG00000181666	chromatin interactions
ENSG00000267360	chromatin interactions
ENSG00000197863	chromatin interactions
ENSG00000198453	chromatin interactions
ENSG00000245680	chromatin interactions
ENSG00000107874	chromatin interactions
ENSG00000196967	chromatin interactions
ENSG00000267345	chromatin interactions
ENSG00000197050	chromatin interactions
ENSG00000188283	chromatin interactions

Extended variants
information (count: 1241 )
Associated
traits (count: 58 )

Variant overlapped rSNPs/rCNVs (count:1241 , 50 per page) page: 1 2 3 4 5 6 7 ... 25

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs559716972	chr19:37708813-37708814	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	9 gene(s)	Overlapped CNVs	n/a
2	rs529976607	chr19:37708817-37708818	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	9 gene(s)	Overlapped CNVs	n/a
3	rs541703192	chr19:37708843-37708844	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	9 gene(s)	Overlapped CNVs	n/a
4	rs372385285	chr19:37708847-37708848	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	9 gene(s)	Overlapped CNVs	n/a
5	rs530914607	chr19:37708849-37708850	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	9 gene(s)	Overlapped CNVs	n/a
6	rs3745767	chr19:37708860-37708861	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	9 gene(s)	Overlapped CNVs	n/a
7	rs191656337	chr19:37708878-37708879	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	9 gene(s)	Overlapped CNVs	n/a
8	rs528502672	chr19:37708948-37708949	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	9 gene(s)	Overlapped CNVs	n/a
9	rs546568303	chr19:37708954-37708955	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	9 gene(s)	Overlapped CNVs	n/a
10	rs568462781	chr19:37708959-37708960	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	9 gene(s)	Overlapped CNVs	n/a
11	rs535177549	chr19:37708983-37708984	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	9 gene(s)	Overlapped CNVs	n/a
12	rs536138354	chr19:37708985-37708986	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	9 gene(s)	Overlapped CNVs	n/a
13	rs142904872	chr19:37708988-37708989	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	9 gene(s)	Overlapped CNVs	n/a
14	rs569385363	chr19:37709061-37709062	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
15	rs536768509	chr19:37709085-37709086	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	Overlapped CNVs	n/a
16	rs35422398	chr19:37709126-37709127	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	10 gene(s)	Overlapped CNVs	n/a
17	rs71356044	chr19:37709148-37709149	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	10 gene(s)	Overlapped CNVs	n/a
18	rs558650551	chr19:37709199-37709200	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
19	rs576995186	chr19:37709211-37709212	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
20	rs541053411	chr19:37709236-37709237	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
21	rs144647788	chr19:37709323-37709324	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
22	rs375605630	chr19:37709338-37709339	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
23	rs566683943	chr19:37709343-37709344	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
24	rs184656932	chr19:37709408-37709409	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
25	rs79593704	chr19:37709432-37709433	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
26	rs79456941	chr19:37709496-37709497	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
27	rs142523892	chr19:37709690-37709691	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
28	rs553864361	chr19:37709733-37709734	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
29	rs563362905	chr19:37709743-37709744	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
30	rs11673646	chr19:37709765-37709766	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	5 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
31	rs370399211	chr19:37709775-37709776	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
32	rs150926517	chr19:37709781-37709782	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
33	rs75437071	chr19:37709810-37709811	Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Weak transcription ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
34	rs139872469	chr19:37709817-37709818	Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Weak transcription ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
35	rs568402109	chr19:37709828-37709829	Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Weak transcription ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
36	rs10425730	chr19:37709873-37709874	Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Weak transcription ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
37	rs529562789	chr19:37709875-37709876	Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Weak transcription ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
38	rs188973576	chr19:37709906-37709907	Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Weak transcription ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
39	rs569366182	chr19:37709961-37709962	Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Weak transcription ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
40	rs557334311	chr19:37709975-37709976	Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Weak transcription ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
41	rs374849966	chr19:37710041-37710042	Weak transcription Active TSS Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
42	rs182090864	chr19:37710059-37710060	Weak transcription Active TSS Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
43	rs376577147	chr19:37710179-37710180	Weak transcription Active TSS Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
44	rs143240035	chr19:37710188-37710189	Weak transcription Active TSS Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
45	rs527668004	chr19:37710207-37710208	Weak transcription Genic enhancers Active TSS Strong transcription Enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
46	rs570605519	chr19:37710222-37710223	Weak transcription Genic enhancers Active TSS Strong transcription Enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
47	rs547805011	chr19:37710251-37710252	Weak transcription Genic enhancers Active TSS Strong transcription Enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
48	rs575891509	chr19:37710269-37710270	Weak transcription Genic enhancers Active TSS Strong transcription Enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
49	rs553009983	chr19:37710284-37710285	Weak transcription Genic enhancers Active TSS Strong transcription Enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
50	rs574349677	chr19:37710303-37710304	Weak transcription Genic enhancers Active TSS Strong transcription Enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:58)

Disease	PMID	Source
Myelodysplastic syndrome	17634407	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Retinoblastoma	21504564	CNVD
Medulloblastoma	21979893	CNVD
Ovarian cancer	21720365	CNVD
Cancer	20164919	CNVD
Thoracic aortic aneurysm	21092924	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Prostate cancer	18632612	CNVD
Autism	22495311	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Ductal carcinoma	22052326	CNVD
Pleomorphic liposarcoma	18784837	CNVD
Congenital nephrotic syndrome	18421352	CNVD
Astrocytoma	17934521	CNVD
Leukemia	17361228	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Breast cancer	21858162	CNVD
Breast cancer	17603634	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Oligodendroglial tumors	17285580	CNVD
renal disease	20603712	CNVD
Salivary gland adenoid cystic carcinoma	17545515	CNVD
Disorders of sex development	21048976	CNVD
Ovarian cancer	22174824	CNVD
Breast cancer	16608533	CNVD
Neuroblastoma	18923191	CNVD
Breast cancer	21364760	CNVD
Invasive pancreatic ductal carcinoma	18765526	CNVD
Rhabdomyosarcoma	16790082	CNVD
Chordoma	18071362	CNVD
Urothelial carcinoma	21177765	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Glioma	17123091	CNVD
Basal cell lymphoma	19029149	CNVD
Diffuse large b-cell lymphoma	19029149	CNVD
Multiple myeloma	16616336	CNVD
Wilms tumour	21544195	CNVD
Mental retardation	19951919	CNVD
19q13.11 deletion syndrome	22378287	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	21045282	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Ovarian neoplasms	16753589	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Metanephric adenoma	20802469	CNVD
Acute myeloid leukemia	16864856	CNVD
Lung cancer	21569311	CNVD

Chromatin state (count:1530 , 50 per page) page: 1 2 3 4 5 6 7 ... 31

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:37708000-37709400	Active TSS	Duodenum Mucosa	Duodenum
2	chr19:37708000-37709600	Active TSS	Rectal Mucosa Donor 29	rectum
3	chr19:37708000-37709800	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
4	chr19:37708000-37709800	Active TSS	Right Atrium	heart
5	chr19:37708000-37709800	Active TSS	HMEC	breast
6	chr19:37708000-37710200	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
7	chr19:37708000-37710200	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
8	chr19:37708000-37710400	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
9	chr19:37708200-37708800	Flanking Active TSS	Primary B cells from cord blood	blood
10	chr19:37708200-37708800	Flanking Active TSS	Adipose Nuclei	Adipose
11	chr19:37708200-37708800	Flanking Active TSS	Liver	Liver
12	chr19:37708200-37709000	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
13	chr19:37708200-37709400	Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
14	chr19:37708200-37709400	Active TSS	Primary hematopoietic stem cells	blood
15	chr19:37708200-37709400	Active TSS	Cortex derived primary cultured neurospheres	brain
16	chr19:37708200-37709400	Active TSS	Brain Angular Gyrus	brain
17	chr19:37708200-37709400	Active TSS	Brain Substantia Nigra	brain
18	chr19:37708200-37709400	Active TSS	Fetal Brain Female	brain
19	chr19:37708200-37709600	Active TSS	iPS-15b Cell Line	embryonic stem cell
20	chr19:37708200-37709600	Active TSS	iPS-18 Cell Line	embryonic stem cell
21	chr19:37708200-37709600	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
22	chr19:37708200-37709600	Active TSS	Brain Anterior Caudate	brain
23	chr19:37708200-37709600	Active TSS	Brain Inferior Temporal Lobe	brain
24	chr19:37708200-37709600	Active TSS	Duodenum Smooth Muscle	Duodenum
25	chr19:37708200-37709600	Active TSS	Fetal Thymus	thymus
26	chr19:37708200-37709600	Active TSS	Rectal Mucosa Donor 31	rectum
27	chr19:37708200-37709600	Active TSS	Skeletal Muscle Male	skeletal muscle
28	chr19:37708200-37709600	Active TSS	Stomach Smooth Muscle	stomach
29	chr19:37708200-37709600	Active TSS	Thymus	Thymus
30	chr19:37708200-37709600	Active TSS	A549	lung
31	chr19:37708200-37709600	Bivalent/Poised TSS	HepG2	liver
32	chr19:37708200-37709600	Active TSS	HUVEC	blood vessel
33	chr19:37708200-37709600	Active TSS	NH-A	brain
34	chr19:37708200-37709800	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
35	chr19:37708200-37709800	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
36	chr19:37708200-37709800	Active TSS	HUES48 Cell Line	embryonic stem cell
37	chr19:37708200-37709800	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
38	chr19:37708200-37709800	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
39	chr19:37708200-37709800	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
40	chr19:37708200-37709800	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
41	chr19:37708200-37709800	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
42	chr19:37708200-37709800	Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
43	chr19:37708200-37709800	Active TSS	Fetal Stomach	stomach
44	chr19:37708200-37709800	Active TSS	GM12878-XiMat	blood
45	chr19:37708200-37709800	Active TSS	Hela-S3	cervix
46	chr19:37708200-37709800	Active TSS	K562	blood
47	chr19:37708200-37709800	Active TSS	NHDF-Ad	bronchial
48	chr19:37708200-37710000	Active TSS	ES-I3 Cell Line	embryonic stem cell
49	chr19:37708200-37710000	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
50	chr19:37708200-37710000	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin

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