Variant report

Variant	nsv965193
Chromosome Location	chr3:101294846-101297410
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:61)
CpG islands
(count:122)
Chromatin interactive
region (count:9)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:61 , 50 per page) page: 1 2

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CEBPB	chr3:101294838-101294995	K562	blood:	n/a	chr3:101294929-101294942 chr3:101294929-101294942 chr3:101294931-101294942
2	CTCF	chr3:101295322-101295425	Fibrobl	skin:	n/a	n/a
3	CTCF	chr3:101295656-101295676	GM13976	blood:	n/a	n/a
4	GATA2	chr3:101295220-101295821	K562	blood:	n/a	n/a
5	HEY1	chr3:101295209-101295877	K562	blood:	n/a	n/a
6	HEY1	chr3:101295266-101295644	K562	blood:	n/a	n/a
7	HEY1	chr3:101295282-101295896	HepG2	liver:	n/a	n/a
8	HEY1	chr3:101295673-101295845	HepG2	liver:	n/a	n/a
9	HEY1	chr3:101295666-101295918	K562	blood:	n/a	n/a
10	MAZ	chr3:101296218-101296231	HepG2	liver:	n/a	n/a
11	MYC	chr3:101295348-101295425	MCF-7	breast:	n/a	n/a
12	PAX5	chr3:101296223-101296504	GM12878	blood:	n/a	n/a
13	PAX5	chr3:101296130-101296687	GM12878	blood:	n/a	n/a
14	PAX5	chr3:101296201-101296556	GM12878	blood:	n/a	n/a
15	POLR2A	chr3:101295214-101295971	GM12891	blood:	n/a	n/a
16	POLR2A	chr3:101295245-101295881	Hela-S3	cervix:	n/a	n/a
17	POLR2A	chr3:101295239-101295375	ProgFib	skin:	n/a	n/a
18	POLR2A	chr3:101295236-101295944	GM12891	blood:	n/a	n/a
19	POLR2A	chr3:101295251-101295476	MCF-7	breast:	n/a	n/a
20	POLR2A	chr3:101295240-101295856	H1-hESC	embryonic stem cell:	n/a	n/a
21	POLR2A	chr3:101295479-101295652	MCF-7	breast:	n/a	n/a
22	POLR2A	chr3:101295182-101296025	H1-hESC	embryonic stem cell:	n/a	n/a
23	POLR2A	chr3:101295284-101295857	GM12878	blood:	n/a	n/a
24	POLR2A	chr3:101295154-101295702	PANC-1	pancreas:	n/a	n/a
25	POLR2A	chr3:101296526-101296686	HepG2	liver:	n/a	n/a
26	POLR2A	chr3:101295266-101295554	HepG2	liver:	n/a	n/a
27	POLR2A	chr3:101295201-101295580	HepG2	liver:	n/a	n/a
28	POLR2A	chr3:101295301-101295494	H1-hESC	embryonic stem cell:	n/a	n/a
29	POLR2A	chr3:101294915-101294919	HUVEC	blood vessel:	n/a	n/a
30	POLR2A	chr3:101296257-101296289	A549	lung:	n/a	n/a
31	POLR2A	chr3:101295204-101295917	GM12892	blood:	n/a	n/a
32	POLR2A	chr3:101295702-101295820	MCF-7	breast:	n/a	n/a
33	POLR2A	chr3:101295226-101295490	Hela-S3	cervix:	n/a	n/a
34	POLR2A	chr3:101295122-101295994	GM12892	blood:	n/a	n/a
35	POLR2A	chr3:101295385-101295394	HUVEC	blood vessel:	n/a	n/a
36	POLR2A	chr3:101295320-101295366	HUVEC	blood vessel:	n/a	n/a
37	POLR2A	chr3:101295221-101295870	GM12891	blood:	n/a	n/a
38	POLR2A	chr3:101296192-101296284	MCF-7	breast:	n/a	n/a
39	POLR2A	chr3:101295267-101295852	GM12891	blood:	n/a	n/a
40	POLR2A	chr3:101295312-101295794	HepG2	liver:	n/a	n/a
41	POLR2A	chr3:101295603-101295662	MCF-7	breast:	n/a	n/a
42	POLR2A	chr3:101297086-101297332	MCF10A-Er-Src	breast:	n/a	n/a
43	POLR2A	chr3:101295081-101295621	K562	blood:	n/a	n/a
44	POLR2A	chr3:101295097-101296010	GM12892	blood:	n/a	n/a
45	POLR2A	chr3:101295753-101295842	A549	lung:	n/a	n/a
46	POLR2A	chr3:101295668-101295697	MCF-7	breast:	n/a	n/a
47	POLR2A	chr3:101295284-101295448	MCF-7	breast:	n/a	n/a
48	POLR2A	chr3:101295207-101295263	MCF-7	breast:	n/a	n/a
49	POLR2A	chr3:101295191-101295967	GM12878	blood:	n/a	n/a
50	POLR2A	chr3:101295329-101295413	A549	lung:	n/a	n/a

(count:122 , 50 per page) page: 1 2 3

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr3:101295794-101295844	T-47D	breast:	n/a
2	chr3:101295624-101295674	HPAEpiC	pulmonary alveolar:	n/a
3	chr3:101295794-101295844	Hela-S3	cervix:	n/a
4	chr3:101295794-101295844	HNPCEpiC	eye:	n/a
5	chr3:101295624-101295674	ECC-1	luminal epithelium:	n/a
6	chr3:101295624-101295674	IMR90	lung:	fetal
7	chr3:101295794-101295844	HPAEpiC	pulmonary alveolar:	n/a
8	chr3:101295794-101295844	RPTEC	kidney:	n/a
9	chr3:101295794-101295844	HEEpiC	esophagus:	n/a
10	chr3:101295794-101295844	PANC-1	pancreas:	n/a
11	chr3:101295794-101295844	HRCEpiC	kidney:	n/a
12	chr3:101295794-101295844	K562	blood:	n/a
13	chr3:101295794-101295844	BE2_C	brain:	n/a
14	chr3:101295794-101295844	HMEC	breast:	n/a
15	chr3:101295624-101295674	HEEpiC	esophagus:	n/a
16	chr3:101295624-101295674	HCPEpiC	choroid plexus:	n/a
17	chr3:101295794-101295844	HCM	heart:	n/a
18	chr3:101295794-101295844	HL-60	blood:	n/a
19	chr3:101295794-101295844	BJ	skin:	n/a
20	chr3:101295794-101295844	AG04450	lung:	fetal
21	chr3:101295624-101295674	GM12892	blood:	n/a
22	chr3:101295624-101295674	HRE	kidney:	n/a
23	chr3:101295624-101295674	GM06990	blood:	n/a
24	chr3:101295794-101295844	CMK	blood:	n/a
25	chr3:101295624-101295674	BJ	skin:	n/a
26	chr3:101295794-101295844	SAEC	small airway:	n/a
27	chr3:101295794-101295844	LNCaP	prostate:	n/a
28	chr3:101295624-101295674	HRCEpiC	kidney:	n/a
29	chr3:101295794-101295844	SK-N-SH_RA	brain:	n/a
30	chr3:101295794-101295844	HCT-116	colon:	n/a
31	chr3:101295794-101295844	Hepatocyte	liver:	n/a
32	chr3:101295794-101295844	MCF10A-Er-Src	breast:	n/a
33	chr3:101295624-101295674	AoSMC	blood vessel:	n/a
34	chr3:101295794-101295844	Jurkat	blood:	n/a
35	chr3:101295794-101295844	HRE	kidney:	n/a
36	chr3:101295624-101295674	ovcar-3	ovarian:	n/a
37	chr3:101295794-101295844	PFSK-1	brain:	n/a
38	chr3:101295794-101295844	NH-A	brain:	n/a
39	chr3:101295794-101295844	AG09309	skin:	n/a
40	chr3:101295624-101295674	GM12878	blood:	n/a
41	chr3:101295794-101295844	AG04449	skin:	fetal
42	chr3:101295624-101295674	PANC-1	pancreas:	n/a
43	chr3:101295624-101295674	HL-60	blood:	n/a
44	chr3:101295794-101295844	H1-hESC	embryonic stem cell:	embryo
45	chr3:101295794-101295844	A549	lung:	n/a
46	chr3:101295794-101295844	HepG2	liver:	n/a
47	chr3:101295624-101295674	HRPEpiC	eye:	n/a
48	chr3:101295624-101295674	AG09309	skin:	n/a
49	chr3:101295794-101295844	GM12878	blood:	n/a
50	chr3:101295794-101295844	HIPEpiC	eye:	n/a

(count:9 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr3:101291201..101295304-chr3:101402286..101407928,8	MCF-7	breast:
2	chr3:101293909..101295477-chr3:101345124..101347411,2	K562	blood:
3	chr3:101289369..101294999-chr3:101391357..101396813,8	K562	blood:
4	chr3:101290641..101295184-chr3:101404268..101406806,5	MCF-7	breast:
5	chr3:101296777..101299755-chr3:101301756..101303953,2	MCF-7	breast:
6	chr3:101291104..101295547-chr3:101393750..101397705,12	MCF-7	breast:
7	chr3:101296714..101298321-chr3:101395804..101398572,2	MCF-7	breast:
8	chr3:101294680..101296540-chr3:101306521..101308762,3	MCF-7	breast:
9	chr3:101293308..101296113-chr3:101394030..101397396,3	MCF-7	breast:

No data

Variant related genes	Relation type
ENSG00000242299	TF binding region
ENSG00000242299	CpG island
ENSG00000114391	chromatin interactions
ENSG00000066422	chromatin interactions
ENSG00000256628	chromatin interactions
ENSG00000212319	chromatin interactions
ENSG00000081154	chromatin interactions

Extended variants
information (count: 99 )
Associated
traits (count: 58 )

Variant overlapped rSNPs/rCNVs (count:99 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs189969286	chr3:101294874-101294875	Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Active TSS	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
2	rs552880547	chr3:101294985-101294986	Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Active TSS	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
3	rs56111657	chr3:101295026-101295027	Weak transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription Active TSS Genic enhancers	Chromatin interactive region	5 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
4	rs369315323	chr3:101295062-101295063	Weak transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription Active TSS Genic enhancers	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
5	rs36064906	chr3:101295063-101295064	Weak transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription Active TSS Genic enhancers	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
6	rs2114304	chr3:101295065-101295066	Weak transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription Active TSS Genic enhancers	Chromatin interactive region	5 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
7	rs2114303	chr3:101295082-101295083	Weak transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription Active TSS Genic enhancers	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
8	rs60957074	chr3:101295089-101295090	Weak transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription Active TSS Genic enhancers	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
9	rs35289041	chr3:101295102-101295103	Weak transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription Active TSS Genic enhancers	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
10	rs559411893	chr3:101295114-101295115	Weak transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription Active TSS Genic enhancers	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
11	rs575054958	chr3:101295150-101295151	Weak transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription Active TSS Genic enhancers	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
12	rs180854833	chr3:101295167-101295168	Weak transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription Active TSS Genic enhancers	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
13	rs563951897	chr3:101295169-101295170	Weak transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription Active TSS Genic enhancers	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
14	rs531268046	chr3:101295173-101295174	Weak transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription Active TSS Genic enhancers	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
15	rs3792412	chr3:101295236-101295237	Weak transcription Enhancers Strong transcription Genic enhancers	Chromatin interactive region	5 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
16	rs564371018	chr3:101295241-101295242	Weak transcription Enhancers Strong transcription Genic enhancers	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
17	rs546663580	chr3:101295254-101295255	Weak transcription Enhancers Strong transcription Genic enhancers	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
18	rs199681143	chr3:101295267-101295268	Weak transcription Enhancers Strong transcription Genic enhancers	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
19	rs3208872	chr3:101295290-101295291	Weak transcription Enhancers Strong transcription Genic enhancers	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
20	rs528490799	chr3:101295302-101295303	Weak transcription Enhancers Strong transcription Genic enhancers	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
21	rs145409613	chr3:101295333-101295334	Weak transcription Enhancers Strong transcription Genic enhancers	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
22	rs568231273	chr3:101295421-101295422	Weak transcription Genic enhancers Strong transcription Enhancers	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
23	rs536009018	chr3:101295432-101295433	Weak transcription Genic enhancers Strong transcription Enhancers	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
24	rs548009478	chr3:101295440-101295441	Weak transcription Genic enhancers Strong transcription Enhancers	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
25	rs148395578	chr3:101295467-101295468	Weak transcription Genic enhancers Strong transcription Enhancers	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
26	rs373173863	chr3:101295494-101295495	Weak transcription Genic enhancers Strong transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
27	rs35917542	chr3:101295502-101295503	Weak transcription Genic enhancers Strong transcription Enhancers	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
28	rs558518829	chr3:101295531-101295532	Weak transcription Genic enhancers Strong transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
29	rs150940762	chr3:101295546-101295547	Weak transcription Genic enhancers Strong transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
30	rs185480935	chr3:101295552-101295553	Weak transcription Genic enhancers Strong transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
31	rs4683933	chr3:101295562-101295563	Weak transcription Genic enhancers Strong transcription Enhancers	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
32	rs574614035	chr3:101295572-101295573	Weak transcription Genic enhancers Strong transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
33	rs4234491	chr3:101295584-101295585	Weak transcription Genic enhancers Strong transcription Enhancers	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
34	rs572705519	chr3:101295601-101295602	Weak transcription Genic enhancers ZNF genes & repeats Strong transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
35	rs147822442	chr3:101295604-101295605	Weak transcription Genic enhancers ZNF genes & repeats Strong transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
36	rs576006054	chr3:101295655-101295656	Weak transcription Genic enhancers ZNF genes & repeats Strong transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
37	rs546134143	chr3:101295694-101295695	Weak transcription Genic enhancers ZNF genes & repeats Strong transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
38	rs9835033	chr3:101295715-101295716	Weak transcription Genic enhancers ZNF genes & repeats Strong transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
39	rs539866346	chr3:101295721-101295722	Weak transcription Genic enhancers ZNF genes & repeats Strong transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
40	rs528441272	chr3:101295751-101295752	Weak transcription Genic enhancers ZNF genes & repeats Strong transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
41	rs546993050	chr3:101295771-101295772	Weak transcription Genic enhancers ZNF genes & repeats Strong transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
42	rs116074383	chr3:101295777-101295778	Weak transcription Genic enhancers ZNF genes & repeats Strong transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
43	rs529379860	chr3:101295787-101295788	Weak transcription Genic enhancers ZNF genes & repeats Strong transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
44	rs141340302	chr3:101295795-101295796	Weak transcription Genic enhancers ZNF genes & repeats Strong transcription Enhancers	TF binding region CpG island Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
45	rs569559379	chr3:101295802-101295803	Weak transcription Genic enhancers ZNF genes & repeats Strong transcription Enhancers	TF binding region CpG island Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
46	rs574026068	chr3:101295813-101295814	Weak transcription Genic enhancers ZNF genes & repeats Strong transcription Enhancers	TF binding region CpG island Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
47	rs530733666	chr3:101295821-101295822	Weak transcription Genic enhancers ZNF genes & repeats Strong transcription Enhancers	TF binding region CpG island Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
48	rs73157306	chr3:101295824-101295825	Weak transcription Genic enhancers ZNF genes & repeats Strong transcription Enhancers	TF binding region CpG island Chromatin interactive region	4 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
49	rs535182805	chr3:101295835-101295836	Weak transcription Genic enhancers ZNF genes & repeats Strong transcription Enhancers	TF binding region CpG island Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
50	rs548811548	chr3:101295843-101295844	Weak transcription Genic enhancers ZNF genes & repeats Strong transcription Enhancers	TF binding region CpG island Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:58)

Disease	PMID	Source
Medulloblastoma	21979893	CNVD
Basal cell lymphoma	17053054	CNVD
Esophageal cancer	21851588	CNVD
Uveal melanoma	21693616	CNVD
Glioblastoma multiforme	21080181	CNVD
Retinoblastoma	21504564	CNVD
Renal cell carcinoma	21668985	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	17603634	CNVD
Uveal melanoma	20484589	CNVD
Autism	22495311	CNVD
Lung cancer	18438408	CNVD
Hirschsprung''s Disease	21712996	CNVD
Hepatocellular carcinoma	16750200	CNVD
Cancer	21183584	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Bipolar disorder	20877625	CNVD
Bipolar disorder	21956041	CNVD
Bipolar disorder	22241247	CNVD
Biliary cancer	18923514	CNVD
Prostate cancer	21965145	CNVD
Cancer	21129771	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Cervical cancer	21062161	CNVD
Squamous cell cancer	20885788	CNVD
Melanoma	18172304	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Bipolar disorder	18458673	CNVD
Breast cancer	22032731	CNVD
Neurodevelopmental disorder	22521361	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Breast cancer	16461572	CNVD
Neuroblastoma	17533364	CNVD
microdeletion syndrome	22180640	CNVD
Cervical Cancer	21857958	CNVD
Melanoma	21693616	CNVD
Lung cancer	21426551	CNVD
Cancer	21637783	CNVD
Cervical cancer	21063398	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Liposarcoma	21253554	CNVD
Oral cancer	21386901	CNVD
Renal cell carcinoma	19461508	CNVD
Cancer	22065749	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
small cell lung cancer	20016488	CNVD
Ductal carcinoma	22052326	CNVD
Myelofibrosis	22110671	CNVD
T-cell acute lymphoblastic leukemia	19406988	CNVD
Breast cancer	16608533	CNVD
Breast cancer	21785460	CNVD
Breast cancer	22522925	CNVD
Melanoma	20877625	CNVD
Bipolar disorder	19114987	CNVD

Chromatin state (count:390 , 50 per page) page: 1 2 3 4 5 6 7 8

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:101291600-101295000	Active TSS	K562	blood
2	chr3:101292000-101295000	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
3	chr3:101292000-101295200	Active TSS	Psoas Muscle	Psoas
4	chr3:101292200-101295000	Active TSS	Right Atrium	heart
5	chr3:101292400-101295000	Active TSS	Breast Myoepithelial Primary Cells	Breast
6	chr3:101292400-101295000	Active TSS	HSMMtube	muscle
7	chr3:101292600-101295000	Active TSS	HUES6 Cell Line	embryonic stem cell
8	chr3:101292600-101295000	Active TSS	A549	lung
9	chr3:101292600-101295000	Active TSS	NH-A	brain
10	chr3:101292600-101295200	Active TSS	HMEC	breast
11	chr3:101293600-101295000	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
12	chr3:101293800-101295000	Flanking Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
13	chr3:101293800-101295000	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
14	chr3:101293800-101295600	Weak transcription	Spleen	Spleen
15	chr3:101294000-101295000	Enhancers	Primary neutrophils fromperipheralblood	blood
16	chr3:101294000-101295000	Flanking Active TSS	HUVEC	blood vessel
17	chr3:101294000-101295000	Flanking Active TSS	Osteobl	bone
18	chr3:101294000-101295200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
19	chr3:101294000-101295200	Weak transcription	Ovary	ovary
20	chr3:101294000-101295600	Weak transcription	Gastric	stomach
21	chr3:101294000-101295600	Weak transcription	Left Ventricle	heart
22	chr3:101294000-101295600	Weak transcription	Lung	lung
23	chr3:101294000-101295600	Weak transcription	Sigmoid Colon	Sigmoid Colon
24	chr3:101294000-101298400	Weak transcription	Pancreas	Pancrea
25	chr3:101294000-101298400	Weak transcription	Small Intestine	intestine
26	chr3:101294000-101301800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
27	chr3:101294000-101305200	Weak transcription	Esophagus	oesophagus
28	chr3:101294000-101312200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
29	chr3:101294200-101295000	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
30	chr3:101294200-101295000	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
31	chr3:101294200-101295000	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
32	chr3:101294200-101295000	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
33	chr3:101294200-101295000	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
34	chr3:101294200-101295000	Enhancers	Adipose Nuclei	Adipose
35	chr3:101294200-101295000	Enhancers	Brain Angular Gyrus	brain
36	chr3:101294200-101295000	Enhancers	Brain Hippocampus Middle	brain
37	chr3:101294200-101295200	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
38	chr3:101294200-101295600	Enhancers	Primary T cells fromperipheralblood	blood
39	chr3:101294200-101295600	Weak transcription	Aorta	Aorta
40	chr3:101294200-101295600	Weak transcription	Fetal Muscle Trunk	muscle
41	chr3:101294200-101296000	Weak transcription	Placenta	Placenta
42	chr3:101294200-101309000	Weak transcription	Colonic Mucosa	Colon
43	chr3:101294200-101310000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
44	chr3:101294200-101319400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
45	chr3:101294400-101295000	Flanking Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
46	chr3:101294400-101295000	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
47	chr3:101294400-101295000	Enhancers	Primary T helper naive cells from peripheral blood	blood
48	chr3:101294400-101295000	Enhancers	Primary T helper cells fromperipheralblood	blood
49	chr3:101294400-101295000	Flanking Active TSS	Duodenum Smooth Muscle	Duodenum
50	chr3:101294400-101295000	Enhancers	Fetal Stomach	stomach

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links