No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs148260382 |
chr6:29717718-29717719 |
Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Weak transcription Enhancers Flanking Active TSS Active TSS
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
2 |
rs192530037 |
chr6:29717744-29717745 |
Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Weak transcription Enhancers Flanking Active TSS Active TSS
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs139200024 |
chr6:29717766-29717767 |
Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Weak transcription Enhancers Flanking Active TSS Active TSS
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs1737083 |
chr6:29717811-29717812 |
Bivalent Enhancer Weak transcription Bivalent/Poised TSS Enhancers Active TSS Flanking Active TSS
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
5 |
rs9258244 |
chr6:29717817-29717818 |
Bivalent Enhancer Weak transcription Bivalent/Poised TSS Enhancers Active TSS Flanking Active TSS
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
6 |
rs1633080 |
chr6:29717826-29717827 |
Bivalent Enhancer Weak transcription Bivalent/Poised TSS Enhancers Active TSS Flanking Active TSS
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
7 |
rs541547786 |
chr6:29717866-29717867 |
Bivalent Enhancer Weak transcription Bivalent/Poised TSS Enhancers Active TSS Flanking Active TSS
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs1737082 |
chr6:29717902-29717903 |
Bivalent Enhancer Weak transcription Bivalent/Poised TSS Enhancers Active TSS Flanking Active TSS
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
9 |
rs577888621 |
chr6:29717930-29717931 |
Bivalent Enhancer Weak transcription Bivalent/Poised TSS Enhancers Active TSS Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs733841 |
chr6:29717980-29717981 |
Bivalent Enhancer Weak transcription Bivalent/Poised TSS Enhancers Active TSS Flanking Active TSS
|
Chromatin interactive region
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
11 |
rs562986423 |
chr6:29718004-29718005 |
Weak transcription Enhancers Active TSS
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs528866545 |
chr6:29718025-29718026 |
Weak transcription Enhancers Active TSS
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs733839 |
chr6:29718094-29718095 |
Weak transcription Enhancers Active TSS
|
CpG islandChromatin interactive region
|
5 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
14 |
rs2517934 |
chr6:29718165-29718166 |
Weak transcription Enhancers Active TSS
|
CpG islandChromatin interactive region
|
5 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
15 |
rs547706681 |
chr6:29718194-29718195 |
Weak transcription Enhancers Active TSS
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs571100402 |
chr6:29718219-29718220 |
Weak transcription Active TSS Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs4713242 |
chr6:29718220-29718221 |
Weak transcription Active TSS Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
18 |
rs2517933 |
chr6:29718224-29718225 |
Weak transcription Active TSS Enhancers
|
Chromatin interactive region
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
19 |
rs115247407 |
chr6:29718225-29718226 |
Weak transcription Active TSS Enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs535874089 |
chr6:29718230-29718231 |
Weak transcription Active TSS Enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
21 |
rs555867047 |
chr6:29718267-29718268 |
Weak transcription Active TSS Enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
22 |
rs112473393 |
chr6:29718281-29718282 |
Weak transcription Active TSS Enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs733840 |
chr6:29718282-29718283 |
Weak transcription Active TSS Enhancers
|
Chromatin interactive region
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
24 |
rs557715051 |
chr6:29718292-29718293 |
Weak transcription Active TSS Enhancers
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs577861213 |
chr6:29718328-29718329 |
Weak transcription Active TSS Enhancers
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
26 |
rs537441657 |
chr6:29718330-29718331 |
Weak transcription Active TSS Enhancers
|
TF binding regionChromatin interactive regionlncRNA
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs553205318 |
chr6:29718331-29718332 |
Weak transcription Active TSS Enhancers
|
TF binding regionChromatin interactive regionlncRNA
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
28 |
rs556292224 |
chr6:29718340-29718341 |
Weak transcription Active TSS Enhancers
|
TF binding regionChromatin interactive regionlncRNA
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
29 |
rs909729 |
chr6:29718355-29718356 |
Weak transcription Active TSS Enhancers
|
TF binding regionChromatin interactive regionlncRNA
|
4 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
30 |
rs1610733 |
chr6:29718383-29718384 |
Weak transcription Active TSS Enhancers
|
TF binding regionChromatin interactive regionlncRNA
|
4 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
31 |
rs1610734 |
chr6:29718401-29718402 |
Weak transcription Active TSS Enhancers
|
TF binding regionChromatin interactive regionlncRNA
|
4 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
32 |
rs376081908 |
chr6:29718416-29718417 |
Weak transcription Active TSS Enhancers
|
TF binding regionChromatin interactive regionlncRNA
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
33 |
rs184808838 |
chr6:29718434-29718435 |
Weak transcription Active TSS Enhancers
|
TF binding regionChromatin interactive regionlncRNA
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
34 |
rs141900996 |
chr6:29718437-29718438 |
Weak transcription Active TSS Enhancers
|
TF binding regionChromatin interactive regionlncRNA
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
35 |
rs1610735 |
chr6:29718519-29718520 |
Weak transcription Active TSS Enhancers
|
Chromatin interactive regionlncRNA
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
36 |
rs547965288 |
chr6:29718541-29718542 |
Weak transcription Active TSS Enhancers
|
Chromatin interactive regionlncRNA
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
37 |
rs1610736 |
chr6:29718544-29718545 |
Weak transcription Active TSS Enhancers
|
Chromatin interactive regionlncRNA
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
38 |
rs573015865 |
chr6:29718562-29718563 |
Weak transcription Active TSS Enhancers
|
Chromatin interactive regionlncRNA
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
39 |
rs533576702 |
chr6:29718576-29718577 |
Weak transcription Active TSS Enhancers
|
Chromatin interactive regionlncRNA
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
40 |
rs3823318 |
chr6:29718578-29718579 |
Weak transcription Active TSS Enhancers
|
Chromatin interactive regionlncRNA
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
41 |
rs570381539 |
chr6:29718630-29718631 |
Weak transcription Active TSS Enhancers
|
Chromatin interactive regionlncRNA
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
42 |
rs62391840 |
chr6:29718690-29718691 |
Weak transcription Active TSS Enhancers
|
Chromatin interactive regionlncRNA
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
43 |
rs529292366 |
chr6:29718712-29718713 |
Weak transcription Active TSS Enhancers
|
Chromatin interactive regionlncRNA
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
44 |
rs386353036 |
chr6:29718751-29718752 |
Weak transcription Active TSS Enhancers
|
Chromatin interactive regionlncRNA
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
45 |
rs199570734 |
chr6:29718752-29718753 |
Weak transcription Active TSS Enhancers
|
Chromatin interactive regionlncRNA
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
46 |
rs9280691 |
chr6:29718753-29718754 |
Weak transcription Active TSS Enhancers
|
Chromatin interactive regionlncRNA
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
47 |
rs1610621 |
chr6:29718790-29718791 |
Weak transcription Active TSS Enhancers
|
Chromatin interactive regionlncRNA
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
48 |
rs566162397 |
chr6:29718795-29718796 |
Weak transcription Active TSS Enhancers
|
Chromatin interactive regionlncRNA
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
49 |
rs376306027 |
chr6:29718802-29718803 |
Weak transcription Active TSS Enhancers
|
Chromatin interactive regionlncRNA
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
50 |
rs534847397 |
chr6:29718809-29718810 |
Weak transcription Active TSS Enhancers
|
Chromatin interactive regionlncRNA
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|