Variant report

Variant	nsv970871
Chromosome Location	chr7:66206610-66210233
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:105)
CpG islands
(count:61)
Chromatin interactive
region (count:17)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:105 , 50 per page) page: 1 2 3

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	BCL11A	chr7:66206378-66206626	GM12878	blood:	n/a	n/a
2	CBX3	chr7:66204579-66206971	K562	blood:	n/a	n/a
3	CEBPB	chr7:66206388-66206730	IMR90	lung:	n/a	n/a
4	CHD1	chr7:66204636-66207098	IMR90	lung:	n/a	chr7:66205738-66205748 chr7:66206110-66206120 chr7:66205667-66205677 chr7:66205672-66205682
5	CHD1	chr7:66207241-66207699	IMR90	lung:	n/a	n/a
6	CTCF	chr7:66207338-66207440	GM10248	blood:	n/a	n/a
7	E2F4	chr7:66206453-66206653	MCF10A-Er-Src	breast:	n/a	n/a
8	E2F6	chr7:66206705-66206837	K562	blood:	n/a	n/a
9	EBF1	chr7:66205184-66206619	GM12878	blood:	n/a	n/a
10	FOS	chr7:66207317-66207580	MCF10A-Er-Src	breast:	n/a	n/a
11	FOS	chr7:66207359-66207690	MCF10A-Er-Src	breast:	n/a	n/a
12	FOS	chr7:66206375-66206774	MCF10A-Er-Src	breast:	n/a	n/a
13	FOS	chr7:66207315-66207686	MCF10A-Er-Src	breast:	n/a	n/a
14	FOS	chr7:66206368-66206785	MCF10A-Er-Src	breast:	n/a	n/a
15	FOS	chr7:66206373-66206661	MCF10A-Er-Src	breast:	n/a	n/a
16	FOS	chr7:66206374-66206613	MCF10A-Er-Src	breast:	n/a	n/a
17	FOS	chr7:66207387-66207594	MCF10A-Er-Src	breast:	n/a	n/a
18	FOSL2	chr7:66205302-66206647	HepG2	liver:	n/a	chr7:66205832-66205841
19	FOSL2	chr7:66207238-66207773	HepG2	liver:	n/a	n/a
20	GATA1	chr7:66208728-66209270	PBDE	blood:	n/a	chr7:66208963-66208972 chr7:66208960-66208976 chr7:66208963-66208973 chr7:66208962-66208974
21	HA-E2F1	chr7:66206403-66206827	MCF-7	breast:	n/a	n/a
22	HEY1	chr7:66206129-66206667	HepG2	liver:	n/a	chr7:66206246-66206261 chr7:66206243-66206258
23	HEY1	chr7:66207257-66207838	K562	blood:	n/a	n/a
24	HEY1	chr7:66204596-66206690	K562	blood:	n/a	chr7:66206246-66206261 chr7:66206243-66206258 chr7:66205661-66205676 chr7:66206043-66206058 chr7:66205368-66205383
25	IRF4	chr7:66206189-66206634	GM12878	blood:	n/a	n/a
26	IRF4	chr7:66206185-66206652	GM12878	blood:	n/a	n/a
27	MAX	chr7:66204943-66206927	K562	blood:	n/a	chr7:66206178-66206188 chr7:66206237-66206247
28	MAX	chr7:66206690-66206888	Hela-S3	cervix:	n/a	n/a
29	MAZ	chr7:66206690-66206822	HepG2	liver:	n/a	n/a
30	MAZ	chr7:66204924-66206914	IMR90	lung:	n/a	chr7:66206178-66206188 chr7:66206237-66206247
31	MAZ	chr7:66207372-66207809	IMR90	lung:	n/a	n/a
32	MXI1	chr7:66205231-66206931	IMR90	lung:	n/a	n/a
33	MXI1	chr7:66204499-66207187	SK-N-SH	brain:	n/a	n/a
34	MXI1	chr7:66207290-66207757	IMR90	lung:	n/a	n/a
35	MYC	chr7:66207286-66207597	MCF10A-Er-Src	breast:	n/a	n/a
36	MYC	chr7:66207286-66207594	MCF10A-Er-Src	breast:	n/a	n/a
37	MYC	chr7:66206830-66207014	MCF10A-Er-Src	breast:	n/a	n/a
38	NFYB	chr7:66206385-66206675	K562	blood:	n/a	n/a
39	NFYB	chr7:66206467-66206680	Hela-S3	cervix:	n/a	n/a
40	NR2F2	chr7:66205992-66206646	K562	blood:	n/a	n/a
41	PAX5	chr7:66208098-66208499	GM12878	blood:	n/a	n/a
42	PAX5	chr7:66208142-66208426	GM12878	blood:	n/a	n/a
43	POLR2A	chr7:66204697-66206639	U87	brain:	n/a	n/a
44	POLR2A	chr7:66207282-66207518	MCF10A-Er-Src	breast:	n/a	n/a
45	POLR2A	chr7:66204908-66206697	GM12891	blood:	n/a	n/a
46	POLR2A	chr7:66207530-66207887	GM12878	blood:	n/a	n/a
47	POLR2A	chr7:66207248-66207610	U87	brain:	n/a	n/a
48	POLR2A	chr7:66204970-66206735	GM12892	blood:	n/a	n/a
49	POLR2A	chr7:66207400-66207476	Hela-S3	cervix:	n/a	n/a
50	POLR2A	chr7:66207259-66207729	Hela-S3	cervix:	n/a	n/a

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr7:66207656-66207706	BJ	skin:	n/a
2	chr7:66207656-66207706	U87	brain:	n/a
3	chr7:66207656-66207706	HEEpiC	esophagus:	n/a
4	chr7:66207656-66207706	HCM	heart:	n/a
5	chr7:66207656-66207706	K562	blood:	n/a
6	chr7:66207656-66207706	HAEpiC	amniotic membrane:	n/a
7	chr7:66207656-66207706	ovcar-3	ovarian:	n/a
8	chr7:66207656-66207706	SK-N-SH	brain:	n/a
9	chr7:66207656-66207706	NHBE	bronchial:	n/a
10	chr7:66207656-66207706	Hela-S3	cervix:	n/a
11	chr7:66207656-66207706	RPTEC	kidney:	n/a
12	chr7:66207656-66207706	HL-60	blood:	n/a
13	chr7:66207656-66207706	BE2_C	brain:	n/a
14	chr7:66207656-66207706	GM19239	blood:	n/a
15	chr7:66207656-66207706	HEK293	kidney:	embryo
16	chr7:66207656-66207706	GM12878	blood:	n/a
17	chr7:66207656-66207706	PFSK-1	brain:	n/a
18	chr7:66207656-66207706	IMR90	lung:	fetal
19	chr7:66207656-66207706	LNCaP	prostate:	n/a
20	chr7:66207656-66207706	SK-N-MC	brain:	n/a
21	chr7:66207656-66207706	PrEC	prostate:	n/a
22	chr7:66207656-66207706	SK-N-SH_RA	brain:	n/a
23	chr7:66207656-66207706	A549	lung:	n/a
24	chr7:66207656-66207706	GM12892	blood:	n/a
25	chr7:66207656-66207706	NHDF-neo	bronchial:	n/a
26	chr7:66207656-66207706	Jurkat	blood:	n/a
27	chr7:66207656-66207706	AG09319	gingival:	n/a
28	chr7:66207656-66207706	AG09309	skin:	n/a
29	chr7:66207656-66207706	ProgFib	skin:	n/a
30	chr7:66207656-66207706	ECC-1	luminal epithelium:	n/a
31	chr7:66207656-66207706	MCF10A-Er-Src	breast:	n/a
32	chr7:66207656-66207706	AG04450	lung:	fetal
33	chr7:66207656-66207706	HCPEpiC	choroid plexus:	n/a
34	chr7:66207656-66207706	H1-hESC	embryonic stem cell:	embryo
35	chr7:66207656-66207706	HMEC	breast:	n/a
36	chr7:66207656-66207706	HNPCEpiC	eye:	n/a
37	chr7:66207656-66207706	HepG2	liver:	n/a
38	chr7:66207656-66207706	HUVEC	blood vessel:	n/a
39	chr7:66207656-66207706	GM12891	blood:	n/a
40	chr7:66207656-66207706	PANC-1	pancreas:	n/a
41	chr7:66207656-66207706	HCF	heart:	n/a
42	chr7:66207656-66207706	HRPEpiC	eye:	n/a
43	chr7:66207656-66207706	Caco-2	colon:	n/a
44	chr7:66207656-66207706	AoSMC	blood vessel:	n/a
45	chr7:66207656-66207706	T-47D	breast:	n/a
46	chr7:66207656-66207706	HPAEpiC	pulmonary alveolar:	n/a
47	chr7:66207656-66207706	HIPEpiC	eye:	n/a
48	chr7:66207656-66207706	HRE	kidney:	n/a
49	chr7:66207656-66207706	Hepatocyte	liver:	n/a
50	chr7:66207656-66207706	NT2-D1	testis:	n/a

(count:17 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr7:66205946..66208187-chr7:66309676..66311325,2	MCF-7	breast:
2	chr7:66205725..66207353-chr7:66207678..66209182,2	MCF-7	breast:
3	chr7:66209588..66211104-chr7:66309557..66311367,2	MCF-7	breast:
4	chr7:66205494..66207120-chr7:66460055..66461810,2	MCF-7	breast:
5	chr7:66203955..66208659-chr7:66209716..66215353,8	K562	blood:
6	chr7:66209147..66212594-chr7:66215527..66217393,3	MCF-7	breast:
7	chr7:66117717..66119604-chr7:66204829..66207389,2	K562	blood:
8	chr7:66203955..66208659-chr7:66209716..66215353,8	K562	blood:
9	chr7:66119236..66121485-chr7:66204940..66206778,2	K562	blood:
10	chr7:66205725..66207353-chr7:66207678..66209182,2	MCF-7	breast:
11	chr7:66021310..66024220-chr7:66204826..66206647,2	MCF-7	breast:
12	chr7:66204257..66207102-chr7:66209621..66212224,4	MCF-7	breast:
13	chr7:66118548..66121026-chr7:66205734..66207315,2	MCF-7	breast:
14	chr7:66144687..66148625-chr7:66203954..66207507,6	K562	blood:
15	chr7:66204928..66209821-chr7:66213597..66216412,7	MCF-7	breast:
16	chr7:66144717..66148625-chr7:66203954..66207507,5	K562	blood:
17	chr7:66118228..66120742-chr7:66209055..66211057,2	MCF-7	breast:

No data

Variant related genes	Relation type
ENSG00000272831	TF binding region
ENSG00000272831	CpG island
ENSG00000226824	chromatin interactions
ENSG00000126524	chromatin interactions
ENSG00000243335	chromatin interactions
ENSG00000154710	chromatin interactions
ENSG00000271064	chromatin interactions
ENSG00000198874	chromatin interactions
ENSG00000177418	chromatin interactions
ENSG00000230583	chromatin interactions
ENSG00000272831	chromatin interactions

Extended variants
information (count: 192 )
Associated
traits (count: 84 )

Variant overlapped rSNPs/rCNVs (count:192 , 50 per page) page: 1 2 3 4

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs143517799	chr7:66206622-66206623	Active TSS Flanking Active TSS Enhancers Weak transcription	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
2	rs370432186	chr7:66206640-66206641	Active TSS Flanking Active TSS Enhancers Weak transcription	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
3	rs548458722	chr7:66206657-66206658	Active TSS Flanking Active TSS Enhancers Weak transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
4	rs9638494	chr7:66206659-66206660	Active TSS Flanking Active TSS Enhancers Weak transcription	TF binding region Chromatin interactive region	7 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
5	rs575301495	chr7:66206696-66206697	Active TSS Flanking Active TSS Enhancers Weak transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
6	rs561081355	chr7:66206702-66206703	Active TSS Flanking Active TSS Enhancers Weak transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
7	rs544255731	chr7:66206707-66206708	Active TSS Flanking Active TSS Enhancers Weak transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
8	rs543265231	chr7:66206725-66206726	Active TSS Flanking Active TSS Enhancers Weak transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
9	rs62466803	chr7:66206756-66206757	Active TSS Flanking Active TSS Enhancers Weak transcription	TF binding region Chromatin interactive region	7 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
10	rs531947029	chr7:66206760-66206761	Active TSS Flanking Active TSS Enhancers Weak transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
11	rs539963922	chr7:66206772-66206773	Active TSS Flanking Active TSS Enhancers Weak transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
12	rs560246736	chr7:66206773-66206774	Active TSS Flanking Active TSS Enhancers Weak transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
13	rs150673669	chr7:66206810-66206811	Active TSS Flanking Active TSS Weak transcription Enhancers	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
14	rs546071244	chr7:66206844-66206845	Active TSS Flanking Active TSS Weak transcription Enhancers	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
15	rs562478427	chr7:66206846-66206847	Active TSS Flanking Active TSS Weak transcription Enhancers	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
16	rs530791061	chr7:66206873-66206874	Active TSS Flanking Active TSS Weak transcription Enhancers	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
17	rs550532235	chr7:66206885-66206886	Active TSS Flanking Active TSS Weak transcription Enhancers	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
18	rs567337417	chr7:66206903-66206904	Active TSS Flanking Active TSS Weak transcription Enhancers	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
19	rs111234762	chr7:66206928-66206929	Active TSS Flanking Active TSS Weak transcription Enhancers	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
20	rs546779564	chr7:66206955-66206956	Active TSS Flanking Active TSS Weak transcription Enhancers	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
21	rs150049846	chr7:66206965-66206966	Active TSS Flanking Active TSS Weak transcription Enhancers	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
22	rs9638495	chr7:66206978-66206979	Active TSS Flanking Active TSS Weak transcription Enhancers	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
23	rs567048105	chr7:66206988-66206989	Active TSS Flanking Active TSS Weak transcription Enhancers	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
24	rs551778214	chr7:66207086-66207087	Weak transcription Enhancers Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
25	rs565699317	chr7:66207087-66207088	Weak transcription Enhancers Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
26	rs559276147	chr7:66207137-66207138	Weak transcription Enhancers Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
27	rs3069894	chr7:66207147-66207148	Weak transcription Enhancers Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	5 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
28	rs368791850	chr7:66207148-66207149	Weak transcription Enhancers Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
29	rs538555372	chr7:66207158-66207159	Weak transcription Enhancers Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
30	rs554567370	chr7:66207188-66207189	Weak transcription Enhancers Active TSS Flanking Active TSS	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
31	rs3962133	chr7:66207246-66207247	Weak transcription Genic enhancers Enhancers Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	5 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
32	rs540320310	chr7:66207316-66207317	Weak transcription Genic enhancers Enhancers Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
33	rs2659890	chr7:66207367-66207368	Weak transcription Genic enhancers Enhancers Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	5 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
34	rs568560809	chr7:66207402-66207403	Weak transcription Genic enhancers Enhancers Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
35	rs113478338	chr7:66207434-66207435	Weak transcription Genic enhancers Enhancers Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
36	rs182389828	chr7:66207436-66207437	Weak transcription Genic enhancers Enhancers Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
37	rs562363603	chr7:66207438-66207439	Weak transcription Genic enhancers Enhancers Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
38	rs537647588	chr7:66207449-66207450	Weak transcription Genic enhancers Enhancers Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
39	rs541730607	chr7:66207480-66207481	Weak transcription Genic enhancers Enhancers Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
40	rs538788761	chr7:66207485-66207486	Weak transcription Genic enhancers Enhancers Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
41	rs560900824	chr7:66207507-66207508	Weak transcription Genic enhancers Enhancers Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
42	rs376663861	chr7:66207512-66207513	Weak transcription Genic enhancers Enhancers Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
43	rs187382970	chr7:66207514-66207515	Weak transcription Genic enhancers Enhancers Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
44	rs189648223	chr7:66207524-66207525	Weak transcription Genic enhancers Enhancers Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
45	rs71526573	chr7:66207532-66207533	Weak transcription Genic enhancers Enhancers Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
46	rs71526574	chr7:66207537-66207538	Weak transcription Genic enhancers Enhancers Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
47	rs180941879	chr7:66207543-66207544	Weak transcription Genic enhancers Enhancers Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
48	rs71563135	chr7:66207547-66207548	Weak transcription Genic enhancers Enhancers Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
49	rs532715553	chr7:66207557-66207558	Weak transcription Genic enhancers Enhancers Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
50	rs552770864	chr7:66207585-66207586	Weak transcription Genic enhancers Enhancers Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:84)

Disease	PMID	Source
Wilms tumour	21544195	CNVD
Medulloblastoma	21979893	CNVD
Basal cell lymphoma	17170743	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Thyroid cancer	19087340	CNVD
Seminomas	18059402	CNVD
Testicular cancer	18059402	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Autism	19415332	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
T-cell lymphomas	19863542	CNVD
Malaria	21533027	CNVD
Melanoma	18172304	CNVD
Renal cell carcinoma	19461508	CNVD
head and neck squamous cell carcinoma	19289630	CNVD
Stenocardia	21860640	CNVD
Vasospasm	21860640	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	22495311	CNVD
Follicular lymphoma	20505157	CNVD
Biliary cancer	19435499	CNVD
Williams-beuren syndrome	22470819	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Multiple myeloma	16461302	CNVD
Glioblastoma multiforme	21750150	CNVD
Cancer	21183584	CNVD
Hepatocellular carcinoma	16750200	CNVD
Non-small cell lung cancer	21829676	CNVD
Gastric cancer	24379144	CNVD
Glioblastoma multiforme	17002787	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Lissencephaly	21572526	CNVD
Breast cancer	17603634	CNVD
Liposarcoma	21253554	CNVD
Breast cancer	16397240	CNVD
Acute myeloid leukemia	16864856	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Squamous cell cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Glioblastoma multiforme	17387387	CNVD
Low-grade fibromyxoid sarcoma	0	CNVD
Oligodendroglial tumors	17285580	CNVD
Endometrial cancer	22040021	CNVD
Burkitt''s lymphoma	18698080	CNVD
Breast cancer	21264507	CNVD
Shwachman-Diamond syndrome	22934832	CNVD
Colorectal cancer	19359472	CNVD
Cutaneous malignant melanoma	17690212	CNVD
Leukemia	17361228	CNVD
Breast cancer	16461572	CNVD
Peripheral t-cell lymphoma	19118030	CNVD
Malignant melanoma	17690212	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Astrocytoma	22246337	CNVD
Renal cell carcinoma	18592004	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Lung cancer	18438408	CNVD
Breast cancer	21364760	CNVD
Acute monocytic leukemia	16498392	CNVD
Prostate cancer	16461572	CNVD
Salivary gland tumor	18059337	CNVD
Multiple myeloma	17550852	CNVD
Acute myeloid leukemia	21251322	CNVD
small cell lung cancer	20016488	CNVD
Bladder cancer	21909424	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Cancer	20164920	CNVD
Prostate cancer	18632612	CNVD
Schizophrenia	21346763	CNVD
Ovarian cancer	21781307	CNVD
Breast cancer	22522925	CNVD
Myelofibrosis	22110671	CNVD
Lung cancer	21911935	CNVD
Barrett''s adenocarcinoma	18663352	CNVD
Neurodevelopmental disorder	22521361	CNVD
Bipolar disorder	19114987	CNVD
Pancreatic cancer	17952125	CNVD

Chromatin state (count:380 , 50 per page) page: 1 2 3 4 5 6 7 8

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:66204200-66208000	Active TSS	HUES64 Cell Line	embryonic stem cell
2	chr7:66204400-66207200	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr7:66204400-66207400	Active TSS	Breast Myoepithelial Primary Cells	Breast
4	chr7:66204400-66207800	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
5	chr7:66204600-66206800	Active TSS	H1 Cell Line	embryonic stem cell
6	chr7:66204600-66206800	Active TSS	iPS-20b Cell Line	embryonic stem cell
7	chr7:66204600-66206800	Active TSS	Fetal Kidney	kidney
8	chr7:66204600-66207000	Active TSS	ES-I3 Cell Line	embryonic stem cell
9	chr7:66204600-66207000	Active TSS	HUES48 Cell Line	embryonic stem cell
10	chr7:66204600-66207000	Active TSS	HUES6 Cell Line	embryonic stem cell
11	chr7:66204600-66207000	Active TSS	iPS-15b Cell Line	embryonic stem cell
12	chr7:66204600-66207000	Active TSS	iPS-18 Cell Line	embryonic stem cell
13	chr7:66204600-66207000	Active TSS	Colon Smooth Muscle	Colon
14	chr7:66204600-66207000	Active TSS	Pancreatic Islets	Pancreatic Islet
15	chr7:66204600-66207000	Active TSS	Psoas Muscle	Psoas
16	chr7:66204600-66207000	Active TSS	Right Ventricle	heart
17	chr7:66204600-66207200	Active TSS	Rectal Mucosa Donor 29	rectum
18	chr7:66204600-66207400	Active TSS	HMEC	breast
19	chr7:66204600-66207600	Active TSS	NHDF-Ad	bronchial
20	chr7:66204600-66207800	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
21	chr7:66204800-66206800	Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
22	chr7:66204800-66206800	Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
23	chr7:66204800-66206800	Active TSS	Esophagus	oesophagus
24	chr7:66204800-66206800	Active TSS	Left Ventricle	heart
25	chr7:66204800-66206800	Active TSS	Lung	lung
26	chr7:66204800-66206800	Active TSS	Rectal Mucosa Donor 31	rectum
27	chr7:66204800-66207000	Active TSS	H9 Cell Line	embryonic stem cell
28	chr7:66204800-66207000	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
29	chr7:66204800-66207000	Active TSS	Ovary	ovary
30	chr7:66204800-66207000	Active TSS	A549	lung
31	chr7:66204800-66207400	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
32	chr7:66204800-66207600	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
33	chr7:66204800-66207600	Active TSS	HSMMtube	muscle
34	chr7:66204800-66207600	Active TSS	NHLF	lung
35	chr7:66204800-66208000	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
36	chr7:66205000-66206800	Active TSS	ES-WA7 Cell Line	embryonic stem cell
37	chr7:66205000-66206800	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
38	chr7:66205000-66206800	Active TSS	Aorta	Aorta
39	chr7:66205000-66206800	Active TSS	Duodenum Mucosa	Duodenum
40	chr7:66205000-66206800	Active TSS	Duodenum Smooth Muscle	Duodenum
41	chr7:66205000-66206800	Active TSS	Gastric	stomach
42	chr7:66205000-66206800	Active TSS	Placenta Amnion	Placenta Amnion
43	chr7:66205000-66206800	Active TSS	Sigmoid Colon	Sigmoid Colon
44	chr7:66205000-66206800	Active TSS	Skeletal Muscle Female	skeletal muscle
45	chr7:66205000-66206800	Active TSS	K562	blood
46	chr7:66205000-66207000	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
47	chr7:66205000-66207000	Flanking Active TSS	Primary mononuclear cells fromperipheralblood	Blood
48	chr7:66205000-66207000	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
49	chr7:66205000-66207200	Active TSS	NHEK	skin
50	chr7:66205000-66207400	Active TSS	GM12878-XiMat	blood

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links