No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs140265057 |
chr11:4009402-4009403 |
Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
2 |
rs537949271 |
chr11:4009427-4009428 |
Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
3 |
rs571800259 |
chr11:4009436-4009437 |
Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
4 |
rs144176174 |
chr11:4009437-4009438 |
Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
5 |
rs78189848 |
chr11:4009477-4009478 |
Weak transcription Strong transcription Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs578153216 |
chr11:4009481-4009482 |
Weak transcription Strong transcription Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs117167113 |
chr11:4009510-4009511 |
Weak transcription Strong transcription Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs560867449 |
chr11:4009518-4009519 |
Weak transcription Strong transcription Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs370944537 |
chr11:4009540-4009541 |
Weak transcription Strong transcription Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs571930168 |
chr11:4009543-4009544 |
Weak transcription Strong transcription Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs542610372 |
chr11:4009544-4009545 |
Weak transcription Strong transcription Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs560889488 |
chr11:4009558-4009559 |
Weak transcription Strong transcription Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs11030517 |
chr11:4009580-4009581 |
Weak transcription Strong transcription Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs543552423 |
chr11:4009605-4009606 |
Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
15 |
rs564924608 |
chr11:4009654-4009655 |
Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
16 |
rs532385671 |
chr11:4009659-4009660 |
Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
17 |
rs72482767 |
chr11:4009718-4009719 |
Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
18 |
rs566001184 |
chr11:4009779-4009780 |
Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
19 |
rs56176149 |
chr11:4009860-4009861 |
Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
20 |
rs529956156 |
chr11:4009915-4009916 |
Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
21 |
rs548915816 |
chr11:4009938-4009939 |
Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
22 |
rs114121696 |
chr11:4009957-4009958 |
Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
23 |
rs61897205 |
chr11:4009959-4009960 |
Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
24 |
rs372194848 |
chr11:4010035-4010036 |
Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
25 |
rs556592557 |
chr11:4010044-4010045 |
Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
26 |
rs556662582 |
chr11:4010071-4010072 |
Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
27 |
rs56362566 |
chr11:4010079-4010080 |
Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
28 |
rs74051582 |
chr11:4010086-4010087 |
Weak transcription Enhancers
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
29 |
rs139546951 |
chr11:4010106-4010107 |
Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
30 |
rs554087410 |
chr11:4010148-4010149 |
Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
31 |
rs180731361 |
chr11:4010177-4010178 |
Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
32 |
rs543347248 |
chr11:4010195-4010196 |
Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
33 |
rs564622566 |
chr11:4010225-4010226 |
Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
34 |
rs117692082 |
chr11:4010232-4010233 |
Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
35 |
rs576148428 |
chr11:4010259-4010260 |
Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
36 |
rs543541805 |
chr11:4010335-4010336 |
Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
37 |
rs565021850 |
chr11:4010375-4010376 |
Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
38 |
rs56091961 |
chr11:4010409-4010410 |
Bivalent/Poised TSS Weak transcription Active TSS Enhancers Flanking Active TSS ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
39 |
rs545811168 |
chr11:4010477-4010478 |
Bivalent/Poised TSS Weak transcription Active TSS Enhancers Flanking Active TSS ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
40 |
rs200245571 |
chr11:4010479-4010480 |
Bivalent/Poised TSS Weak transcription Active TSS Enhancers Flanking Active TSS ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
41 |
rs541188831 |
chr11:4010491-4010492 |
Bivalent/Poised TSS Weak transcription Active TSS Enhancers Flanking Active TSS ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
42 |
rs553721104 |
chr11:4010507-4010508 |
Bivalent/Poised TSS Weak transcription Active TSS Enhancers Flanking Active TSS ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
43 |
rs7928545 |
chr11:4010529-4010530 |
Bivalent/Poised TSS Weak transcription Active TSS Enhancers Flanking Active TSS ZNF genes & repeats
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
44 |
rs183830191 |
chr11:4010540-4010541 |
Bivalent/Poised TSS Weak transcription Active TSS Enhancers Flanking Active TSS ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
45 |
rs189280633 |
chr11:4010542-4010543 |
Bivalent/Poised TSS Weak transcription Active TSS Enhancers Flanking Active TSS ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
46 |
rs199635536 |
chr11:4010549-4010550 |
Bivalent/Poised TSS Weak transcription Active TSS Enhancers Flanking Active TSS ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
47 |
rs567316473 |
chr11:4010563-4010564 |
Bivalent/Poised TSS Weak transcription Active TSS Enhancers Flanking Active TSS ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
48 |
rs531623194 |
chr11:4010590-4010591 |
Bivalent/Poised TSS Weak transcription Active TSS Enhancers Flanking Active TSS ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
49 |
rs549991115 |
chr11:4010645-4010646 |
Bivalent/Poised TSS Enhancers Active TSS Flanking Active TSS Weak transcription Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
50 |
rs571679316 |
chr11:4010657-4010658 |
Bivalent/Poised TSS Enhancers Active TSS Flanking Active TSS Weak transcription Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|