Variant report

Variant	nsv981888
Chromosome Location	chr8:102683092-102690020
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 450 )
Associated
traits (count: 114 )

Variant overlapped rSNPs/rCNVs (count:450 , 50 per page) page: 1 2 3 4 5 6 7 ... 9

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs527998124	chr8:102683096-102683097	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs140372176	chr8:102683097-102683098	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs564797893	chr8:102683102-102683103	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs531849447	chr8:102683109-102683110	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs181639298	chr8:102683122-102683123	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs549945655	chr8:102683124-102683125	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs539605274	chr8:102683132-102683133	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs568636903	chr8:102683138-102683139	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs78759503	chr8:102683139-102683140	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs529710203	chr8:102683145-102683146	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs547794606	chr8:102683167-102683168	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs115780838	chr8:102683236-102683237	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs185922033	chr8:102683265-102683266	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs189472850	chr8:102683292-102683293	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs151021681	chr8:102683299-102683300	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs538067550	chr8:102683318-102683319	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs3939935	chr8:102683331-102683332	ZNF genes & repeats Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
18	rs112175940	chr8:102683333-102683334	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs377020133	chr8:102683334-102683335	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs554211488	chr8:102683339-102683340	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs572394608	chr8:102683365-102683366	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs546167642	chr8:102683371-102683372	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs564659507	chr8:102683372-102683373	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs576650311	chr8:102683382-102683383	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs543627912	chr8:102683386-102683387	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs561909696	chr8:102683391-102683392	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs140692497	chr8:102683392-102683393	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs150092553	chr8:102683398-102683399	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs560186187	chr8:102683414-102683415	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs527333380	chr8:102683427-102683428	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs552129554	chr8:102683428-102683429	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs563569083	chr8:102683462-102683463	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs538104391	chr8:102683464-102683465	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs368692323	chr8:102683468-102683469	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs550010351	chr8:102683477-102683478	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs570014695	chr8:102683482-102683483	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs538904272	chr8:102683519-102683520	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs535641856	chr8:102683588-102683589	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs369634211	chr8:102683596-102683597	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs2096551	chr8:102683600-102683601	ZNF genes & repeats Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
41	rs571976379	chr8:102683606-102683607	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs572485503	chr8:102683607-102683608	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs182088645	chr8:102683621-102683622	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs539474575	chr8:102683624-102683625	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs558102485	chr8:102683633-102683634	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs186240373	chr8:102683673-102683674	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs138470731	chr8:102683674-102683675	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs562045541	chr8:102683675-102683676	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs574703239	chr8:102683678-102683679	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs144043382	chr8:102683680-102683681	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:114)

Disease	PMID	Source
Wilms tumour	21544195	CNVD
Gastric cancer	17908304	CNVD
Melanoma	18172304	CNVD
Medulloblastoma	21979893	CNVD
Ewing''s sarcoma	21437220	CNVD
Autism	19415332	CNVD
Malaria	21533027	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Esophageal cancer	21851588	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Breast cancer	21245420	CNVD
Thoracic aortic aneurysm	21092924	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
lymphocytic leukemia	21291569	CNVD
Liver carcinoma	19366792	CNVD
Seminomas	18059402	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Pancreatic cancer	21811587	CNVD
Thyroid cancer	19087340	CNVD
Myelofibrosis	22110671	CNVD
Glioblastoma multiforme	21080181	CNVD
Breast cancer	17603634	CNVD
Testicular cancer	18059402	CNVD
Breast cancer	17133270	CNVD
Breast cancer	21509527	CNVD
Acute myeloid leukemia	20729466	CNVD
Breast cancer	21858162	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Cancer	20164919	CNVD
abnormal development	18461090	CNVD
Oral cancer	21386901	CNVD
Uveal melanoma	21693616	CNVD
Langer-Giedion syndrome	22283845	CNVD
Cancer	21637783	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Breast cancer	20632083	CNVD
Breast cancer	19602461	CNVD
Cancer	22429812	CNVD
Endometrial cancer	22040021	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oral cancer	19627613	CNVD
Prostate cancer	21088497	CNVD
colon cancer	17210682	CNVD
Breast cancer	21264507	CNVD
Breast cancer	22028636	CNVD
Acute myeloid leukemia	16864856	CNVD
Cancer	16751803	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Gastric cancer	17167181	CNVD
Colorectal cancer	19359472	CNVD
Breast cancer	16461572	CNVD
Human rectal carcinomas	16397240	CNVD
Medulloblastoma	16968546	CNVD
head and neck squamous cell carcinoma	18028549	CNVD
Breast cancer	17001317	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Ewing''s sarcoma	17952124	CNVD
Urothelial carcinoma	21177765	CNVD
Lung cancer	18438408	CNVD
Breast cancer	16608533	CNVD
Metanephric adenoma	20802469	CNVD
Hepatocellular carcinoma	18803288	CNVD
Prostate cancer	18632612	CNVD
Glioblastoma multiforme	18628472	CNVD
Ovarian cancer	22174824	CNVD
Prostate cancer	16573809	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Cancer	21949371	CNVD
Non-small cell lung cancer	21829676	CNVD
Multiple myeloma	16461302	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Acute myeloid leukemia	21358987	CNVD
Carcinoma ex pleomorphic adenoma	18828159	CNVD
Adenocarcinoma	21044232	CNVD
Squamous cell cancer	20885788	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Prostate cancer	16461572	CNVD
Breast cancer	21399628	CNVD
small cell lung cancer	20016488	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Breast cancer	17393978	CNVD
Burkitt''s lymphoma	18698080	CNVD
Non-syndromic sensorineural hearing loss	20606397	CNVD
Bladder cancer	19088036	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Breast cancer	17899364	CNVD
Acute myeloid leukemia	21251322	CNVD
Renal cell carcinoma	18765545	CNVD
Basal cell lymphoma	17170743	CNVD
Colorectal cancer	16774939	CNVD
Autosomal-dominant progressive external ophthalmoplegia	19664747	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Malignant melanoma	17260012	CNVD
Sezary syndrome	18413736	CNVD
Esophageal adenocarcinoma	18519675	CNVD
Cancer	20164920	CNVD
Urothelial cell carcinoma	18451213	CNVD
Colorectal cancer	21645411	CNVD
Barrett''s adenocarcinoma	18663352	CNVD
Ovarian cancer	20844748	CNVD
Colorectal cancer	16912164	CNVD
Breast cancer	20409316	CNVD
Congenital anomalies of the kidney and urinary tract	20467480	CNVD
Breast cancer	21611746	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
T-cell lymphomas	22341440	CNVD
Oral squamous cell carcinoma	21853135	CNVD

Chromatin state (count:30 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:102670800-102699000	Weak transcription	Right Ventricle	heart
2	chr8:102678800-102683800	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell
3	chr8:102679800-102683200	ZNF genes & repeats	iPS-20b Cell Line	embryonic stem cell
4	chr8:102679800-102683800	ZNF genes & repeats	H1 Cell Line	embryonic stem cell
5	chr8:102680000-102698000	Weak transcription	Stomach Smooth Muscle	stomach
6	chr8:102680200-102683400	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
7	chr8:102680600-102683400	ZNF genes & repeats	Fetal Intestine Small	intestine
8	chr8:102681200-102683200	Weak transcription	Placenta Amnion	Placenta Amnion
9	chr8:102682200-102683200	ZNF genes & repeats	iPS DF 19.11 Cell Line	embryonic stem cell
10	chr8:102682200-102683200	ZNF genes & repeats	Breast Myoepithelial Primary Cells	Breast
11	chr8:102682200-102683200	ZNF genes & repeats	Foreskin Keratinocyte Primary Cells skin02	Skin
12	chr8:102682200-102683200	ZNF genes & repeats	Foreskin Keratinocyte Primary Cells skin03	Skin
13	chr8:102682400-102683200	ZNF genes & repeats	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
14	chr8:102682400-102683200	ZNF genes & repeats	Gastric	stomach
15	chr8:102682400-102684200	ZNF genes & repeats	Fetal Muscle Leg	muscle
16	chr8:102682600-102683200	ZNF genes & repeats	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
17	chr8:102682600-102683200	ZNF genes & repeats	Lung	lung
18	chr8:102682800-102683200	ZNF genes & repeats	Aorta	Aorta
19	chr8:102682800-102683200	ZNF genes & repeats	Fetal Lung	lung
20	chr8:102683000-102683200	ZNF genes & repeats	Brain Substantia Nigra	brain
21	chr8:102683000-102683800	ZNF genes & repeats	Fetal Muscle Trunk	muscle
22	chr8:102683200-102702000	Weak transcription	Fetal Lung	lung
23	chr8:102683800-102684600	Weak transcription	Aorta	Aorta
24	chr8:102684200-102689000	Weak transcription	Fetal Muscle Leg	muscle
25	chr8:102685600-102698000	Weak transcription	Aorta	Aorta
26	chr8:102688600-102697800	Weak transcription	Cortex derived primary cultured neurospheres	brain
27	chr8:102689200-102690200	ZNF genes & repeats	Fetal Muscle Leg	muscle
28	chr8:102689400-102690200	ZNF genes & repeats	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
29	chr8:102689800-102690200	ZNF genes & repeats	Breast Myoepithelial Primary Cells	Breast
30	chr8:102690000-102690200	ZNF genes & repeats	H9 Derived Neuron Cultured Cells	ES cell derived

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