No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs78176743 |
chr12:9436617-9436618 |
Active TSS Weak transcription
|
Chromatin interactive regionlncRNA
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
2 |
rs3864913 |
chr12:9436619-9436620 |
Active TSS Weak transcription
|
Chromatin interactive regionlncRNA
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs2433011 |
chr12:9436635-9436636 |
Active TSS Weak transcription
|
Chromatin interactive regionlncRNA
|
4 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
4 |
rs141108594 |
chr12:9436705-9436706 |
Active TSS Weak transcription
|
Chromatin interactive regionlncRNA
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
5 |
rs202099377 |
chr12:9436760-9436761 |
Active TSS Weak transcription
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs374500669 |
chr12:9436866-9436867 |
Active TSS Weak transcription Enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs2429869 |
chr12:9436875-9436876 |
Active TSS Weak transcription Enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs535131507 |
chr12:9436991-9436992 |
Active TSS Weak transcription Enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs2433010 |
chr12:9437006-9437007 |
Active TSS Flanking Active TSS Enhancers Weak transcription
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs181161050 |
chr12:9437042-9437043 |
Active TSS Flanking Active TSS Enhancers Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs3882943 |
chr12:9437043-9437044 |
Active TSS Flanking Active TSS Enhancers Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs397833764 |
chr12:9437155-9437156 |
Active TSS Flanking Active TSS Enhancers Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
13 |
rs61916195 |
chr12:9437216-9437217 |
Active TSS Weak transcription Enhancers Flanking Active TSS
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
14 |
rs397833763 |
chr12:9437217-9437218 |
Active TSS Weak transcription Enhancers Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
15 |
rs28712430 |
chr12:9437221-9437222 |
Active TSS Weak transcription Enhancers Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
16 |
rs2553176 |
chr12:9437259-9437260 |
Active TSS Weak transcription Enhancers Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
mRNA abundance
|
17 |
rs61916197 |
chr12:9437336-9437337 |
Active TSS Weak transcription Enhancers Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
18 |
rs374627795 |
chr12:9437386-9437387 |
Active TSS Weak transcription Enhancers Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
19 |
rs3874120 |
chr12:9437428-9437429 |
Weak transcription Active TSS Enhancers
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
20 |
rs113334835 |
chr12:9437482-9437483 |
Weak transcription Active TSS Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
21 |
rs2553174 |
chr12:9437570-9437571 |
Weak transcription Active TSS Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
22 |
rs12425975 |
chr12:9437614-9437615 |
Weak transcription Active TSS Enhancers Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
23 |
rs2536741 |
chr12:9437694-9437695 |
Weak transcription Active TSS Enhancers Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
24 |
rs201548374 |
chr12:9437707-9437708 |
Weak transcription Active TSS Enhancers Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
25 |
rs199994668 |
chr12:9437749-9437750 |
Weak transcription Active TSS Enhancers Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
26 |
rs200853700 |
chr12:9437755-9437756 |
Weak transcription Active TSS Enhancers Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
27 |
rs370643083 |
chr12:9437778-9437779 |
Weak transcription Active TSS Enhancers Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
28 |
rs201658681 |
chr12:9437826-9437827 |
Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
29 |
rs374308131 |
chr12:9437946-9437947 |
Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
30 |
rs368663004 |
chr12:9438014-9438015 |
Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
31 |
rs370798814 |
chr12:9438066-9438067 |
Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
32 |
rs2553170 |
chr12:9438094-9438095 |
Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
33 |
rs2553166 |
chr12:9438490-9438491 |
Weak transcription
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
34 |
rs200119573 |
chr12:9438565-9438566 |
Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
35 |
rs201220005 |
chr12:9438658-9438659 |
Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
36 |
rs61916199 |
chr12:9438722-9438723 |
Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
37 |
rs2433009 |
chr12:9438929-9438930 |
Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
38 |
rs113787381 |
chr12:9438953-9438954 |
Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
39 |
rs201703850 |
chr12:9439222-9439223 |
Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
40 |
rs61916200 |
chr12:9439257-9439258 |
Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
41 |
rs200340789 |
chr12:9439294-9439295 |
Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
42 |
rs542882702 |
chr12:9439351-9439352 |
Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
43 |
rs553164058 |
chr12:9439395-9439396 |
Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
44 |
rs573062621 |
chr12:9439399-9439400 |
Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
45 |
rs144848791 |
chr12:9439404-9439405 |
Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
46 |
rs61916202 |
chr12:9439435-9439436 |
Weak transcription
|
TF binding region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
47 |
rs2433008 |
chr12:9439461-9439462 |
Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
48 |
rs4316594 |
chr12:9439553-9439554 |
Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
49 |
rs4516053 |
chr12:9439635-9439636 |
Weak transcription
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
50 |
rs199502360 |
chr12:9439670-9439671 |
Weak transcription
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|