Variant report

Variant	nsv983614
Chromosome Location	chr13:93691500-93697268
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 94 )
Associated
traits (count: 88 )

Variant overlapped rSNPs/rCNVs (count:94 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs117464400	chr13:93691576-93691577	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
2	rs370709730	chr13:93691598-93691599	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
3	rs569337663	chr13:93691599-93691600	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
4	rs538348925	chr13:93691602-93691603	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
5	rs557148760	chr13:93691695-93691696	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
6	rs567515227	chr13:93691734-93691735	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
7	rs187481154	chr13:93691746-93691747	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
8	rs553029549	chr13:93691768-93691769	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
9	rs541539249	chr13:93691788-93691789	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
10	rs2217833	chr13:93691813-93691814	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
11	rs544650048	chr13:93691831-93691832	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
12	rs183908469	chr13:93691846-93691847	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
13	rs574954604	chr13:93691849-93691850	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
14	rs374156845	chr13:93691914-93691915	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
15	rs561135210	chr13:93691923-93691924	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
16	rs375984022	chr13:93691947-93691948	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
17	rs530264968	chr13:93692002-93692003	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
18	rs466293	chr13:93692003-93692004	ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
19	rs560593047	chr13:93692004-93692005	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
20	rs459591	chr13:93692020-93692021	ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
21	rs143102301	chr13:93692044-93692045	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
22	rs536145949	chr13:93692056-93692057	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
23	rs569276215	chr13:93692059-93692060	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
24	rs531841151	chr13:93692071-93692072	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
25	rs188901887	chr13:93692082-93692083	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
26	rs117614580	chr13:93692089-93692090	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
27	rs567455427	chr13:93692105-93692106	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
28	rs2082818	chr13:93692126-93692127	ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
29	rs2082819	chr13:93692141-93692142	ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
30	rs566616494	chr13:93692146-93692147	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
31	rs193086390	chr13:93692164-93692165	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
32	rs558220688	chr13:93692165-93692166	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
33	rs574934183	chr13:93692194-93692195	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
34	rs543886572	chr13:93692254-93692255	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
35	rs114274271	chr13:93692257-93692258	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
36	rs146121536	chr13:93692263-93692264	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
37	rs529585479	chr13:93692267-93692268	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
38	rs138964397	chr13:93692292-93692293	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
39	rs7318703	chr13:93692301-93692302	ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
40	rs577414809	chr13:93692306-93692307	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
41	rs113398287	chr13:93692345-93692346	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
42	rs143961305	chr13:93692379-93692380	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
43	rs368118292	chr13:93692394-93692395	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
44	rs75584186	chr13:93692438-93692439	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
45	rs562136276	chr13:93692440-93692441	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
46	rs527800830	chr13:93692444-93692445	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
47	rs462859	chr13:93692484-93692485	ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
48	rs547485262	chr13:93692501-93692502	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
49	rs2840032	chr13:93692510-93692511	ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
50	rs538546494	chr13:93692511-93692512	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:88)

Disease	PMID	Source
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	21080181	CNVD
HIV/AIDS	22032296	CNVD
Prostate cancer	16705090	CNVD
High-proliferative meningiomas	17937814	CNVD
Cancer	20164919	CNVD
Autism	22495311	CNVD
Chordoma	21602918	CNVD
Bladder cancer	21949216	CNVD
Acute myeloid leukemia	16864856	CNVD
Burkitt''s lymphoma	18698080	CNVD
Cancer	21637783	CNVD
Medulloblastoma	21979893	CNVD
Chronic lymphocytic leukemia	21518781	CNVD
colon cancer	17210682	CNVD
Endometrial cancer	22040021	CNVD
Colorectal cancer	20709793	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
Ovarian cancer	20844748	CNVD
Colorectal cancer	19359472	CNVD
Intracranial aneurysm	19064780	CNVD
Breast cancer	19287154	CNVD
Acute myeloid leukemia	18379011	CNVD
Human rectal carcinomas	16397240	CNVD
Olfactory neuroblastoma	18408657	CNVD
Multiple myeloma	17077331	CNVD
Ependymoma	16718352	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Colorectal cancer	16272173	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Breast cancer	16608533	CNVD
Neuroblastoma	18923191	CNVD
Ovarian cancer	22174824	CNVD
Myoepithelioma	18604193	CNVD
Breast cancer	17133270	CNVD
Prostate cancer	18632612	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Melanoma	18172304	CNVD
Prostate cancer	16573809	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Basal cell lymphoma	17053054	CNVD
Metanephric adenoma	20802469	CNVD
Gastric cancer	17908304	CNVD
Splenic marginal zone lymphoma	18492102	CNVD
Liposarcoma	21253554	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Acute myeloid leukemia	20729466	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Non-syndromic sensorineural hearing loss	20606397	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Esophageal cancer	21851588	CNVD
Prostate cancer	21965145	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Cancer	21220470	CNVD
Cancer	21183584	CNVD
Omodysplasia	19481194	CNVD
Breast cancer	22032731	CNVD
Mantle cell lymphoma	19690137	CNVD
Rhabdomyosarcoma	17210683	CNVD
Breast cancer	21364760	CNVD
Medulloblastoma	19270706	CNVD
Myelofibrosis	22110671	CNVD
coloboma	21285886	CNVD
Burkitt''s lymphoma	19759907	CNVD
Wilms tumour	21544195	CNVD
Acute myeloid leukemia	19651601	CNVD
Effusion lymphoma	18079361	CNVD
Developmental delay	21147756	CNVD
Cancer	20164920	CNVD
Melanoma	20877625	CNVD
Colorectal cancer	21645411	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
early-passage human iPS cells	21368824	CNVD

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:93690600-93692600	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr13:93692600-93693200	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
3	chr13:93693400-93693800	Enhancers	HUES48 Cell Line	embryonic stem cell

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