Variant report

Variant	nsv983846
Chromosome Location	chr14:84641622-84643399
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-RP11-497E19.2.1-9	chr14:84640135-84641854	NONHSAT038102
2	lnc-RP11-497E19.2.1-8	chr14:84642763-84643432	NONHSAT038103

Extended variants
information (count: 44 )
Associated
traits (count: 63 )

Variant overlapped rSNPs/rCNVs (count:44 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs567942012	chr14:84641653-84641654	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
2	rs112091418	chr14:84641666-84641667	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
3	rs537491853	chr14:84641727-84641728	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
4	rs112893122	chr14:84641744-84641745	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
5	rs73378984	chr14:84641779-84641780	Inactive region	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
6	rs538312518	chr14:84641789-84641790	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
7	rs553572872	chr14:84641804-84641805	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
8	rs371196098	chr14:84641805-84641806	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
9	rs187579665	chr14:84641809-84641810	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
10	rs143071250	chr14:84641818-84641819	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
11	rs548106376	chr14:84642764-84642765	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
12	rs569857501	chr14:84642773-84642774	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
13	rs77308386	chr14:84642774-84642775	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
14	rs374403981	chr14:84642781-84642782	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
15	rs368405153	chr14:84642793-84642794	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
16	rs558851354	chr14:84642821-84642822	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
17	rs537649984	chr14:84642833-84642834	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
18	rs555965057	chr14:84642843-84642844	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
19	rs189042235	chr14:84642877-84642878	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
20	rs570755100	chr14:84642924-84642925	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
21	rs539039613	chr14:84642933-84642934	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
22	rs2841157	chr14:84642934-84642935	Inactive region	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
23	rs367601655	chr14:84642994-84642995	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
24	rs535374893	chr14:84643039-84643040	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
25	rs149652677	chr14:84643045-84643046	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
26	rs543083379	chr14:84643057-84643058	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
27	rs554744908	chr14:84643058-84643059	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
28	rs576611626	chr14:84643090-84643091	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
29	rs60218904	chr14:84643113-84643114	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
30	rs548430907	chr14:84643179-84643180	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
31	rs565284680	chr14:84643186-84643187	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
32	rs532625326	chr14:84643187-84643188	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
33	rs113447019	chr14:84643188-84643189	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
34	rs140147312	chr14:84643220-84643221	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
35	rs143670933	chr14:84643258-84643259	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
36	rs566694899	chr14:84643265-84643266	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
37	rs181671019	chr14:84643278-84643279	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
38	rs1779552	chr14:84643293-84643294	Inactive region	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
39	rs368493020	chr14:84643299-84643300	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
40	rs185840192	chr14:84643316-84643317	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
41	rs552738051	chr14:84643372-84643373	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
42	rs146459880	chr14:84643382-84643383	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
43	rs552040647	chr14:84643388-84643389	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
44	rs570771568	chr14:84643391-84643392	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a

Variant related diseases (count:63)

Disease	PMID	Source
Esophageal cancer	21851588	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Retinoblastoma	21504564	CNVD
High-proliferative meningiomas	17937814	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Autism	22495311	CNVD
Non-small cell lung cancer	21044232	CNVD
Renal cell carcinoma	19461508	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Melanoma	18172304	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Medulloblastoma	21979893	CNVD
Oral cancer	21386901	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Hepatocellular carcinoma	22174799	CNVD
Neuroblastoma	19435921	CNVD
Colorectal cancer	19359472	CNVD
Breast cancer	17899364	CNVD
Gastrointestinal stromal cancer	19259404	CNVD
Gastrointestinal stromal cancer	17535989	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Paraganglioma	17535989	CNVD
Pulmonary chondroma	17535989	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Renal cell carcinoma	21668985	CNVD
Chronic myeloid leukemia	20724749	CNVD
Wilms tumour	21544195	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Urothelial carcinoma	21177765	CNVD
Breast cancer	21858162	CNVD
Lung cancer	18438408	CNVD
Colorectal cancer	16272173	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Colorectal cancer	16774939	CNVD
Malignant mesothelioma	18160781	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Neuroblastoma	18923191	CNVD
Barrett''s syndrome	19417022	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Basal cell lymphoma	17053054	CNVD
cataract	16735990	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Breast cancer	16608533	CNVD
Gastrointestinal stromal cancer	20877625	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
small cell lung cancer	20016488	CNVD
Developmental delay	21147756	CNVD
Breast cancer	17603634	CNVD
Glioblastoma	21080181	CNVD
Breast cancer	17133270	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Cancer	20164920	CNVD
Breast cancer	21364760	CNVD
Myelofibrosis	22110671	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD

Chromatin state (count:0 , 50 per page) page:

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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