Variant report

Variant nsv997422
Chromosome Location chr4:55104743-55132489
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:295 , 50 per page) page: 1 2 3 4 5 6
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:55101000-55105200 Weak transcription Aorta Aorta
2 chr4:55101200-55105800 Weak transcription Breast Myoepithelial Primary Cells Breast
3 chr4:55101200-55106400 Weak transcription Right Atrium heart
4 chr4:55101400-55110200 Weak transcription Fetal Kidney kidney
5 chr4:55102200-55105200 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
6 chr4:55102600-55106200 Enhancers Ovary ovary
7 chr4:55102800-55106200 Enhancers Placenta Placenta
8 chr4:55102800-55109000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
9 chr4:55103400-55105000 Strong transcription NHLF lung
10 chr4:55103400-55107000 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
11 chr4:55103400-55110000 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
12 chr4:55103800-55105000 Genic enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
13 chr4:55103800-55105800 Weak transcription Fetal Stomach stomach
14 chr4:55103800-55106200 Weak transcription Fetal Lung lung
15 chr4:55104000-55109400 Strong transcription Osteobl bone
16 chr4:55104000-55110000 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
17 chr4:55104200-55105000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
18 chr4:55104200-55105600 Weak transcription NHDF-Ad bronchial
19 chr4:55104200-55106200 Genic enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
20 chr4:55104200-55106400 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
21 chr4:55104200-55110200 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
22 chr4:55104400-55104800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
23 chr4:55104400-55104800 Enhancers NHEK skin
24 chr4:55104400-55105000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr4:55104400-55105400 Enhancers HMEC breast
26 chr4:55104400-55106200 Genic enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
27 chr4:55104600-55104800 Enhancers Colon Smooth Muscle Colon
28 chr4:55104800-55105200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr4:55105000-55105200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
30 chr4:55105000-55106400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr4:55105000-55106400 Weak transcription NHLF lung
32 chr4:55105200-55105600 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
33 chr4:55105200-55105600 Enhancers Aorta Aorta
34 chr4:55105200-55105800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
35 chr4:55105600-55105800 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
36 chr4:55105600-55109800 ZNF genes & repeats NHDF-Ad bronchial
37 chr4:55105600-55124800 Weak transcription Aorta Aorta
38 chr4:55105800-55106000 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
39 chr4:55105800-55106600 ZNF genes & repeats Fetal Stomach stomach
40 chr4:55105800-55106800 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
41 chr4:55105800-55107000 Enhancers Breast Myoepithelial Primary Cells Breast
42 chr4:55106000-55107000 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
43 chr4:55106200-55106600 Transcr. at gene 5' and 3' Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr4:55106200-55106600 Genic enhancers Ovary ovary
45 chr4:55106200-55107200 Transcr. at gene 5' and 3' Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr4:55106200-55107200 ZNF genes & repeats Fetal Lung lung
47 chr4:55106400-55106800 Genic enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr4:55106400-55106800 Active TSS Duodenum Smooth Muscle Duodenum
49 chr4:55106400-55106800 ZNF genes & repeats Fetal Muscle Trunk muscle
50 chr4:55106400-55107200 ZNF genes & repeats Foreskin Fibroblast Primary Cells skin01 Skin

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