Variant report

Variant	rs10027922
Chromosome Location	chr11:63218038-63218039
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 88 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:86)

rs_ID	r²[population]
rs10021733	0.91[ASN][1000 genomes]
rs10805278	0.91[ASN][1000 genomes]
rs11737432	0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12501893	0.81[ASN][1000 genomes]
rs12505899	0.81[ASN][1000 genomes]
rs12641531	0.91[ASN][1000 genomes]
rs12648642	0.91[ASN][1000 genomes]
rs13140136	0.81[ASN][1000 genomes]
rs1389178	0.91[ASN][1000 genomes]
rs1493150	0.91[ASN][1000 genomes]
rs1514126	0.81[ASN][1000 genomes]
rs1514128	0.81[ASN][1000 genomes]
rs1514129	0.91[ASN][1000 genomes]
rs1565703	0.91[ASN][1000 genomes]
rs167104	0.81[ASN][1000 genomes]
rs2047031	0.91[ASN][1000 genomes]
rs2248575	0.91[ASN][1000 genomes]
rs2458606	0.81[ASN][1000 genomes]
rs2458607	0.81[ASN][1000 genomes]
rs2458608	0.81[ASN][1000 genomes]
rs2458613	0.81[ASN][1000 genomes]
rs2458614	0.81[ASN][1000 genomes]
rs2458616	0.81[ASN][1000 genomes]
rs2458617	0.81[ASN][1000 genomes]
rs2458618	0.81[ASN][1000 genomes]
rs2458619	0.91[ASN][1000 genomes]
rs2458621	0.83[ASN][1000 genomes]
rs2458624	0.81[ASN][1000 genomes]
rs2458626	0.91[ASN][1000 genomes]
rs2458627	0.91[ASN][1000 genomes]
rs2458628	0.91[ASN][1000 genomes]
rs2458629	0.83[ASN][1000 genomes]
rs2458630	0.91[ASN][1000 genomes]
rs2471685	0.91[ASN][1000 genomes]
rs2471687	0.91[ASN][1000 genomes]
rs2471689	0.91[ASN][1000 genomes]
rs2471690	0.91[ASN][1000 genomes]
rs2471691	0.91[ASN][1000 genomes]
rs2471692	0.91[ASN][1000 genomes]
rs2471703	0.91[ASN][1000 genomes]
rs2471705	0.91[ASN][1000 genomes]
rs2471707	0.91[ASN][1000 genomes]
rs2471709	0.91[ASN][1000 genomes]
rs2471710	0.91[ASN][1000 genomes]
rs2471711	0.91[ASN][1000 genomes]
rs2471715	0.81[ASN][1000 genomes]
rs2471717	0.81[ASN][1000 genomes]
rs2471718	0.81[ASN][1000 genomes]
rs2471719	0.81[ASN][1000 genomes]
rs2471720	0.81[ASN][1000 genomes]
rs2471721	0.81[ASN][1000 genomes]
rs28406281	0.91[ASN][1000 genomes]
rs2943155	0.81[ASN][1000 genomes]
rs2943156	0.81[ASN][1000 genomes]
rs2943157	0.81[ASN][1000 genomes]
rs2943158	0.81[ASN][1000 genomes]
rs2943160	0.91[ASN][1000 genomes]
rs2960592	0.81[ASN][1000 genomes]
rs2995111	0.81[ASN][1000 genomes]
rs34072092	0.81[ASN][1000 genomes]
rs4234996	0.91[ASN][1000 genomes]
rs4234997	0.91[ASN][1000 genomes]
rs4280716	0.91[ASN][1000 genomes]
rs4367162	0.91[ASN][1000 genomes]
rs4377578	0.91[ASN][1000 genomes]
rs4382025	0.91[ASN][1000 genomes]
rs4472125	0.91[ASN][1000 genomes]
rs4605640	0.91[ASN][1000 genomes]
rs4692334	0.91[ASN][1000 genomes]
rs4692335	0.91[ASN][1000 genomes]
rs4692340	0.91[ASN][1000 genomes]
rs4692341	0.91[ASN][1000 genomes]
rs4692343	0.91[ASN][1000 genomes]
rs557255	0.81[ASN][1000 genomes]
rs67741650	0.81[ASN][1000 genomes]
rs67753751	0.81[ASN][1000 genomes]
rs702	0.91[ASN][1000 genomes]
rs73219413	0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs73219415	0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7655105	0.91[ASN][1000 genomes]
rs7672198	0.91[ASN][1000 genomes]
rs7693339	0.89[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7695696	0.91[ASN][1000 genomes]
rs7698467	0.91[ASN][1000 genomes]
rs9784504	0.91[ASN][1000 genomes]
rs9790669	0.83[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1051171	chr11:62987064-63835715	Genic enhancers Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	100 gene(s)	inside rSNPs	diseases
2	esv1822068	chr11:63146055-63239984	Weak transcription Enhancers Strong transcription ZNF genes & repeats Bivalent Enhancer Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:63216800-63220200	Weak transcription	H9 Cell Line	embryonic stem cell
2	chr11:63216800-63224600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
3	chr11:63217000-63219800	Weak transcription	HUES64 Cell Line	embryonic stem cell
4	chr11:63217000-63219800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
5	chr11:63217000-63220000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
6	chr11:63217000-63227200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
7	chr11:63217400-63220200	Weak transcription	H1 Cell Line	embryonic stem cell
8	chr11:63217400-63227200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
9	chr11:63217800-63218200	ZNF genes & repeats	ES-I3 Cell Line	embryonic stem cell

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