Variant report

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs10027583	0.87[EUR][1000 genomes]
rs16869213	0.98[AFR][1000 genomes];0.94[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs16869250	0.87[EUR][1000 genomes]
rs16869307	0.87[EUR][1000 genomes]
rs16869324	0.81[EUR][1000 genomes]
rs16869332	0.81[EUR][1000 genomes]
rs16869334	0.81[EUR][1000 genomes]
rs2322428	0.87[EUR][1000 genomes]
rs28368613	0.81[EUR][1000 genomes]
rs28376053	0.86[EUR][1000 genomes]
rs28583512	0.92[AFR][1000 genomes];0.94[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs28661856	0.87[EUR][1000 genomes]
rs28696258	0.87[EUR][1000 genomes]
rs28765165	0.80[EUR][1000 genomes]
rs55749296	0.87[EUR][1000 genomes]
rs56191900	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs66614292	0.84[EUR][1000 genomes]
rs6849518	0.92[AFR][1000 genomes];0.92[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs73249157	0.81[EUR][1000 genomes]
rs73249158	0.81[EUR][1000 genomes]
rs73249175	0.80[EUR][1000 genomes]
rs7356248	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7356250	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs750268	0.81[EUR][1000 genomes]
rs9985922	0.80[EUR][1000 genomes]
rs9994864	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9998416	0.87[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv529290	chr4:19658583-20173839	Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv593790	chr4:19740879-20142039	Flanking Active TSS Active TSS Enhancers Weak transcription Bivalent Enhancer Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:20131600-20134000	Weak transcription	Pancreas	Pancrea
2	chr4:20132800-20133200	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr4:20133000-20133200	Enhancers	Spleen	Spleen

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