Variant report

Variant	rs10034513
Chromosome Location	chr4:81224276-81224277
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs10009812	0.86[ASN][1000 genomes]
rs10020144	0.91[ASN][1000 genomes]
rs10032770	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10213482	0.89[ASN][1000 genomes]
rs10434062	0.86[ASN][1000 genomes]
rs17004882	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs28680678	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs3816574	0.88[AMR][1000 genomes];0.81[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6853244	0.91[ASN][1000 genomes]
rs731658	0.86[ASN][1000 genomes]
rs7655270	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7680580	0.91[ASN][1000 genomes]

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:81202200-81226200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr4:81210000-81225800	Weak transcription	Muscle Satellite Cultured Cells	--
3	chr4:81210400-81226200	Weak transcription	HSMM	muscle
4	chr4:81211400-81226200	Weak transcription	NH-A	brain
5	chr4:81217600-81226200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
6	chr4:81217600-81226400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
7	chr4:81218000-81225600	Weak transcription	NHLF	lung
8	chr4:81222000-81229400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
9	chr4:81223800-81224400	Strong transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
10	chr4:81223800-81224400	ZNF genes & repeats	Foreskin Fibroblast Primary Cells skin01	Skin
11	chr4:81223800-81224400	Genic enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
12	chr4:81223800-81224800	Weak transcription	NHDF-Ad	bronchial
13	chr4:81223800-81225000	Weak transcription	Osteobl	bone

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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