Variant report

Variant	rs28680678
Chromosome Location	chr4:81231713-81231714
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs10009812	0.86[ASN][1000 genomes]
rs10020144	0.91[ASN][1000 genomes]
rs10032770	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10034513	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10213482	0.93[ASN][1000 genomes]
rs10434062	0.86[ASN][1000 genomes]
rs17004882	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs3816574	0.91[ASN][1000 genomes]
rs6853244	0.91[ASN][1000 genomes]
rs731658	0.86[ASN][1000 genomes]
rs7655270	0.96[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7680580	0.95[ASN][1000 genomes]

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:81224800-81232200	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
2	chr4:81229400-81232000	Enhancers	HMEC	breast
3	chr4:81229800-81231800	Enhancers	Muscle Satellite Cultured Cells	--
4	chr4:81230000-81231800	Enhancers	NHEK	skin
5	chr4:81230800-81231800	Enhancers	Osteobl	bone
6	chr4:81230800-81232000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
7	chr4:81231000-81235000	Enhancers	NHDF-Ad	bronchial
8	chr4:81231400-81234000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
9	chr4:81231400-81235800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
10	chr4:81231400-81239200	Weak transcription	HSMM	muscle
11	chr4:81231600-81243400	Weak transcription	NH-A	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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