The 2.0 version of rSNPBase

Variant report

Variant rs10045839
Chromosome Location chr5:145143970-145143971
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:145105400-145179000 Weak transcription Pancreas Pancrea
2 chr5:145109400-145194400 Weak transcription Colonic Mucosa Colon
3 chr5:145111400-145166800 Weak transcription K562 blood
4 chr5:145114000-145163400 Weak transcription Small Intestine intestine
5 chr5:145124200-145145000 Weak transcription Fetal Intestine Small intestine
6 chr5:145126800-145155000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr5:145130600-145146800 Weak transcription Adipose Nuclei Adipose
8 chr5:145131000-145156800 Weak transcription Gastric stomach
9 chr5:145133000-145154800 Weak transcription Fetal Lung lung
10 chr5:145133400-145145200 Weak transcription Skeletal Muscle Female skeletal muscle
11 chr5:145133800-145146800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
12 chr5:145133800-145154600 Weak transcription Osteobl bone
13 chr5:145134400-145146800 Weak transcription Lung lung
14 chr5:145134800-145147000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
15 chr5:145135400-145146600 Weak transcription Aorta Aorta
16 chr5:145137800-145154400 Weak transcription Placenta Amnion Placenta Amnion
17 chr5:145138000-145157800 Weak transcription Primary hematopoietic stem cells short term culture blood
18 chr5:145138200-145146800 Weak transcription Fetal Adrenal Gland Adrenal Gland
19 chr5:145139000-145165400 Weak transcription Duodenum Smooth Muscle Duodenum
20 chr5:145139600-145145200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
21 chr5:145140000-145146800 Weak transcription Primary hematopoietic stem cells blood
22 chr5:145140000-145157800 Weak transcription Sigmoid Colon Sigmoid Colon
23 chr5:145140400-145157200 Weak transcription Left Ventricle heart
24 chr5:145140600-145144000 Weak transcription Hela-S3 cervix
25 chr5:145140600-145153800 Weak transcription Ovary ovary
26 chr5:145140600-145156000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr5:145141200-145146400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
28 chr5:145141200-145194400 Weak transcription Stomach Smooth Muscle stomach
29 chr5:145141400-145148600 Weak transcription Colon Smooth Muscle Colon
30 chr5:145141600-145146200 Weak transcription Liver Liver
31 chr5:145141600-145155600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
32 chr5:145142000-145144600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
33 chr5:145142000-145145400 Strong transcription Breast Myoepithelial Primary Cells Breast
34 chr5:145142400-145147400 Strong transcription Rectal Mucosa Donor 31 rectum
35 chr5:145142400-145162400 Weak transcription Rectal Smooth Muscle rectum
36 chr5:145142600-145146800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
37 chr5:145143400-145144000 Strong transcription Fetal Stomach stomach
38 chr5:145143600-145144200 Strong transcription Fetal Intestine Large intestine
39 chr5:145143600-145144800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
40 chr5:145143800-145144000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
41 chr5:145143800-145144200 Strong transcription Duodenum Mucosa Duodenum
42 chr5:145143800-145144200 Enhancers HUVEC blood vessel
43 chr5:145143800-145145400 Strong transcription Rectal Mucosa Donor 29 rectum

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Last update: Aug 31, 2015